RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 QRFPRQ96P65 431 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 ACE2Q9BYF1 805 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 TRIM9Q9C026 710 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 PRDM12Q9H4Q4 367 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 RIOX1Q9H6W3 641 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 NHEJ1Q9H9Q4 299 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 EPB41L4AQ9HCS5 686 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CRTAC1Q9NQ79 661 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 RIC8BQ9NVN3 520 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 RBM22Q9NW64 420 aaKnown RBP eCLIP3.01□□□□□ -1.934e-6■■■■□ 24.2
SMCHD1-203ENST00000577880 SMARCAL1Q9NZC9 954 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 PAK5Q9P286 719 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 EDARQ9UNE0 448 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 DRG1Q9Y295 367 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 POLR1DQ9Y2S0 133 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 PCDHA2Q9Y5H9 948 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CEMIPQ8WUJ3 1361 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 A0A1W2PQ45 241 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 A0A1W2PQY0 241 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 IGF2BP3O00425 579 aaKnown RBP eCLIP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 INPPL1O15357 1258 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 FGGP02679 453 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 ASLP04424 464 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 PIM1P11309 404 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 STMN1P16949 149 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 MAPK1P28482 360 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 HNF1BP35680 557 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 HSPA9P38646 679 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 PRCPP42785 496 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 SARSP49591 514 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 ATP1A2P50993 1020 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 BLVRAP53004 296 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 ITGA8P53708 1063 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 MYL6P60660 151 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CREB5Q02930 508 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 ILF2Q12905 390 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 BOP1Q14137 746 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 GSTA3Q16772 222 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CLEC16AQ2KHT3 1053 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 POM121L1PQ3SYA9 428 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 SGO1Q5FBB7 561 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 C6orf10Q5SRN2 563 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 PHF19Q5T6S3 580 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 RESP18Q5W5W9 173 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 PHLDB3Q6NSJ2 640 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 ZCCHC8Q6NZY4 707 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 VITQ6UXI7 678 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CHST9Q7L1S5 443 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 LPCAT2Q7L5N7 544 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 OTOAQ7RTW8 1153 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 FAM131BQ86XD5 332 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 TMEM192Q8IY95 271 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 ALLCQ8N6M5 410 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 POMGNT2Q8NAT1 580 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 FAM98AQ8NCA5 519 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 DAGLBQ8NCG7 672 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 OR9Q1Q8NGQ5 310 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 MIPOL1Q8TD10 442 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 SLC2A14Q8TDB8 520 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 BPIFB1Q8TDL5 484 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 C2orf15Q8WU43 125 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CLIP3Q96DZ5 547 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CCDC138Q96M89 665 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 SERPINI1Q99574 410 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 OSBPL6Q9BZF3 934 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 BTBD1Q9H0C5 482 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 RHBGQ9H310 441 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 TMEM134Q9H6X4 195 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 BCL2L12Q9HB09 334 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 MCCC2Q9HCC0 563 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 KRCC1Q9NPI7 259 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 C20orf96Q9NUD7 363 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 KLHL28Q9NXS3 571 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 TRIM10Q9UDY6 481 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 TTC7AQ9ULT0 858 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 PCDHA13Q9Y5I0 950 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 URB1O60287 2271 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 MGAT4DA6NG13 374 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 USP27XA6NNY8 438 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 EVPLLA8MZ36 301 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 SPATA31C2B4DYI2 1134 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 SCAMP3O14828 347 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 KPNA5O15131 536 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 MAFO75444 373 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 TIPRLO75663 272 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 NFICP08651 508 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 ELFN1P0C7U0 828 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CCNYL3P0C7X3 344 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CSF2RAP15509 400 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 TCF3P15923 654 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CDH3P22223 829 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 DDX6P26196 483 aaKnown RBP eCLIP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 VARSP26640 1264 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CCND3P30281 292 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 SPRP35270 261 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 FDFT1P37268 417 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 PRIM2P49643 509 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 RARRES1P49788 294 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 NDST1P52848 882 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 OCA2Q04671 838 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms