RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 NRIP1P48552 1158 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 COG7P83436 770 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 C2orf54Q08AI8 447 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 TWF1Q12792 350 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 NME3Q13232 169 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 XRCC4Q13426 336 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 ERCC6LQ2NKX8 1250 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 ANKRD20A8PQ5CZ79 823 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 TCEAL5Q5H9L2 206 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 HECTD3Q5T447 861 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 PDZD4Q76G19 769 aaPredicted RBP12.9□□□□□ -0.34
TSEN54-204ENST00000577197 DNAJB7Q7Z6W7 309 aaPredicted RBP12.9□□□□□ -0.34
TSEN54-204ENST00000577197 RBM23Q86U06 439 aaKnown RBP12.9□□□□□ -0.34
TSEN54-204ENST00000577197 UNC45BQ8IWX7 931 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 DEFB123Q8N688 67 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 CCDC185Q8N715 623 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 LRRN4CLQ8ND94 238 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 ATL2Q8NHH9 583 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 SLC35B2Q8TB61 432 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 HSPH1Q92598 858 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 CASP10Q92851 521 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 MAGOHBQ96A72 148 aaKnown RBP12.9□□□□□ -0.34
TSEN54-204ENST00000577197 PLD4Q96BZ4 506 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 FAM161BQ96MY7 647 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 EPAS1Q99814 870 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 CALN1Q9BXU9 219 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 BRD8Q9H0E9 1235 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 DHX35Q9H5Z1 703 aaKnown RBP12.9□□□□□ -0.34
TSEN54-204ENST00000577197 OSER1Q9NX31 292 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 DNMT3LQ9UJW3 386 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 HCFC2Q9Y5Z7 792 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 CHD9Q3L8U1 2897 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 CCDC151A5D8V7 595 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 APOL1O14791 398 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 PER2O15055 1255 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 NCAM2O15394 837 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 FGF10O15520 208 aaPredicted RBP12.89□□□□□ -0.35
TSEN54-204ENST00000577197 ZMYND10O75800 440 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 GAS8O95995 478 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 OAS1P00973 400 aaKnown RBP12.89□□□□□ -0.35
TSEN54-204ENST00000577197 APOEP02649 317 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 C8AP07357 584 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 IGFBP4P22692 258 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 PITX1P78337 314 aaPredicted RBP12.89□□□□□ -0.35
TSEN54-204ENST00000577197 ZNF33AQ06730 810 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 CUL1Q13616 776 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 KCNC3Q14003 757 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 BRD3Q15059 726 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 MANEALQ5VSG8 457 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 SDHAF4Q5VUM1 108 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 AADACL2Q6P093 401 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 CCDC137Q6PK04 289 aaKnown RBP12.89□□□□□ -0.35
TSEN54-204ENST00000577197 TMEM184AQ6ZMB5 413 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 ZDHHC14Q8IZN3 488 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 EFHBQ8N7U6 833 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 KIAA1958Q8N8K9 716 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 ATP6V0D2Q8N8Y2 350 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.89□□□□□ -0.35
TSEN54-204ENST00000577197 HNRNPLLQ8WVV9 542 aaKnown RBP12.89□□□□□ -0.35
TSEN54-204ENST00000577197 HAUS1Q96CS2 278 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 BTN2A3PQ96KV6 586 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 ZNF512Q96ME7 567 aaPredicted RBP12.89□□□□□ -0.35
TSEN54-204ENST00000577197 CSPG4P5Q96PW8 444 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 KCTD15Q96SI1 283 aaPredicted RBP12.89□□□□□ -0.35
TSEN54-204ENST00000577197 KRT12Q99456 494 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 CDX2Q99626 313 aaPredicted RBP12.89□□□□□ -0.35
TSEN54-204ENST00000577197 AP1M1Q9BXS5 423 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 ANKZF1Q9H8Y5 726 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 DZANK1Q9NVP4 752 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 ARGLU1Q9NWB6 273 aaPredicted RBP12.89□□□□□ -0.35
TSEN54-204ENST00000577197 SMARCAL1Q9NZC9 954 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 MARCH2Q9P0N8 246 aa12.89□□□□□ -0.35
TSEN54-204ENST00000577197 PPARGC1AQ9UBK2 798 aaKnown RBP12.89□□□□□ -0.35
TSEN54-204ENST00000577197 DENND4CQ5VZ89 1909 aa12.88□□□□□ -0.35
TSEN54-204ENST00000577197 HACD1B0YJ81 288 aa12.88□□□□□ -0.35
TSEN54-204ENST00000577197 PI4K2BG5E9Z4 385 aa12.88□□□□□ -0.35
TSEN54-204ENST00000577197 LIASO43766 372 aa12.88□□□□□ -0.35
TSEN54-204ENST00000577197 CST8O60676 142 aa12.88□□□□□ -0.35
TSEN54-204ENST00000577197 SOAT2O75908 522 aa12.88□□□□□ -0.35
TSEN54-204ENST00000577197 ECEL1O95672 775 aa12.88□□□□□ -0.35
TSEN54-204ENST00000577197 F11P03951 625 aa12.88□□□□□ -0.35
TSEN54-204ENST00000577197 EPCAMP16422 314 aa12.88□□□□□ -0.35
TSEN54-204ENST00000577197 STIP1P31948 543 aaKnown RBP12.88□□□□□ -0.35
TSEN54-204ENST00000577197 SERPINB6P35237 376 aa12.88□□□□□ -0.35
TSEN54-204ENST00000577197 VCPP55072 806 aaKnown RBP12.88□□□□□ -0.35
TSEN54-204ENST00000577197 TBX4P57082 545 aa12.88□□□□□ -0.35
TSEN54-204ENST00000577197 DR1Q01658 176 aa12.88□□□□□ -0.35
TSEN54-204ENST00000577197 HYAL1Q12794 435 aa12.88□□□□□ -0.35
TSEN54-204ENST00000577197 IFRD2Q12894 506 aaPredicted RBP12.88□□□□□ -0.35
TSEN54-204ENST00000577197 MTMR3Q13615 1198 aa12.88□□□□□ -0.35
TSEN54-204ENST00000577197 BYSLQ13895 437 aaKnown RBP12.88□□□□□ -0.35
TSEN54-204ENST00000577197 DPYSQ14117 519 aa12.88□□□□□ -0.35
TSEN54-204ENST00000577197 PAFAH1B3Q15102 231 aaKnown RBP12.88□□□□□ -0.35
TSEN54-204ENST00000577197 NOMO1Q15155 1222 aa12.88□□□□□ -0.35
TSEN54-204ENST00000577197 OASLQ15646 514 aaKnown RBP12.88□□□□□ -0.35
TSEN54-204ENST00000577197 ELF2Q15723 593 aa12.88□□□□□ -0.35
TSEN54-204ENST00000577197 RAB6CQ53S08 254 aa12.88□□□□□ -0.35
TSEN54-204ENST00000577197 ZC3H12AQ5D1E8 599 aaKnown RBP12.88□□□□□ -0.35
TSEN54-204ENST00000577197 C10orf120Q5SQS8 335 aa12.88□□□□□ -0.35
TSEN54-204ENST00000577197 RFX8Q6ZV50 586 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms