RNA–Protein interactions for RNA: ENST00000574875.1

ABR-231, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 239 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-231ENST00000574875 TMEM110Q86TL2 294 aa20.28■□□□□ 0.84
ABR-231ENST00000574875 C11orf74Q86VG3 221 aa20.28■□□□□ 0.84
ABR-231ENST00000574875 UNC45BQ8IWX7 931 aa20.28■□□□□ 0.84
ABR-231ENST00000574875 CHPFQ8IZ52 775 aa20.28■□□□□ 0.84
ABR-231ENST00000574875 PGBD3Q8N328 593 aa20.28■□□□□ 0.84
ABR-231ENST00000574875 FAM149B1Q96BN6 582 aa20.28■□□□□ 0.84
ABR-231ENST00000574875 TMA16Q96EY4 203 aaKnown RBP20.28■□□□□ 0.84
ABR-231ENST00000574875 ACOX2Q99424 681 aa20.28■□□□□ 0.84
ABR-231ENST00000574875 SLC2A11Q9BYW1 496 aa20.28■□□□□ 0.84
ABR-231ENST00000574875 BCCIPQ9P287 314 aaKnown RBP eCLIP20.28■□□□□ 0.84
ABR-231ENST00000574875 CYTH4Q9UIA0 394 aa20.28■□□□□ 0.84
ABR-231ENST00000574875 STOML2Q9UJZ1 356 aa20.28■□□□□ 0.84
ABR-231ENST00000574875 ABCA7Q8IZY2 2146 aa20.27■□□□□ 0.84
ABR-231ENST00000574875 TCRBV21S2A2A0A5A6 115 aa20.27■□□□□ 0.84
ABR-231ENST00000574875 TSPAN3O60637 253 aa20.27■□□□□ 0.84
ABR-231ENST00000574875 EPN2O95208 641 aa20.27■□□□□ 0.84
ABR-231ENST00000574875 LATS1O95835 1130 aa20.27■□□□□ 0.84
ABR-231ENST00000574875 HOXB2P14652 356 aa20.27■□□□□ 0.84
ABR-231ENST00000574875 GBP1P32455 592 aa20.27■□□□□ 0.84
ABR-231ENST00000574875 TBX4P57082 545 aa20.27■□□□□ 0.84
ABR-231ENST00000574875 KCNMA1Q12791 1236 aa20.27■□□□□ 0.84
ABR-231ENST00000574875 TCP11X2Q5H9J9 407 aa20.27■□□□□ 0.84
ABR-231ENST00000574875 OLIG1Q8TAK6 271 aa20.27■□□□□ 0.84
ABR-231ENST00000574875 HMGB4Q8WW32 186 aa20.27■□□□□ 0.84
ABR-231ENST00000574875 PIWIL1Q96J94 861 aaKnown RBP20.27■□□□□ 0.84
ABR-231ENST00000574875 IMPACTQ9P2X3 320 aa20.27■□□□□ 0.84
ABR-231ENST00000574875 AJAP1Q9UKB5 411 aaPredicted RBP20.27■□□□□ 0.84
ABR-231ENST00000574875 CLEC4EQ9ULY5 219 aa20.27■□□□□ 0.84
ABR-231ENST00000574875 NAALADL1Q9UQQ1 740 aa20.27■□□□□ 0.84
ABR-231ENST00000574875 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.27■□□□□ 0.84
ABR-231ENST00000574875 ESPNB1AK53 854 aa20.26■□□□□ 0.83
ABR-231ENST00000574875 E5RJQ4 531 aa20.26■□□□□ 0.83
ABR-231ENST00000574875 ZBTB24O43167 697 aaPredicted RBP20.26■□□□□ 0.83
ABR-231ENST00000574875 PAPSS1O43252 624 aaPredicted RBP20.26■□□□□ 0.83
ABR-231ENST00000574875 SERPINC1P01008 464 aa20.26■□□□□ 0.83
ABR-231ENST00000574875 IGLV3-27P01718 113 aa20.26■□□□□ 0.83
ABR-231ENST00000574875 CDK11BP21127 795 aaKnown RBP20.26■□□□□ 0.83
ABR-231ENST00000574875 SDHBP21912 280 aa20.26■□□□□ 0.83
ABR-231ENST00000574875 EEF1GP26641 437 aaKnown RBP20.26■□□□□ 0.83
ABR-231ENST00000574875 CLCN1P35523 988 aa20.26■□□□□ 0.83
ABR-231ENST00000574875 RING1Q06587 406 aa20.26■□□□□ 0.83
ABR-231ENST00000574875 PUM1Q14671 1186 aaKnown RBP eCLIP20.26■□□□□ 0.83
ABR-231ENST00000574875 GEN1Q17RS7 908 aa20.26■□□□□ 0.83
ABR-231ENST00000574875 NUGGCQ68CJ6 796 aa20.26■□□□□ 0.83
ABR-231ENST00000574875 DPY19L2P1Q6NXN4 242 aa20.26■□□□□ 0.83
ABR-231ENST00000574875 BEND5Q7L4P6 421 aa20.26■□□□□ 0.83
ABR-231ENST00000574875 WDTC1Q8N5D0 677 aa20.26■□□□□ 0.83
ABR-231ENST00000574875 AZIN2Q96A70 460 aa20.26■□□□□ 0.83
ABR-231ENST00000574875 DLL3Q9NYJ7 618 aa20.26■□□□□ 0.83
ABR-231ENST00000574875 IFNKQ9P0W0 207 aa20.26■□□□□ 0.83
ABR-231ENST00000574875 PCDHGC3Q9UN70 934 aa20.26■□□□□ 0.83
ABR-231ENST00000574875 PCDHGA5Q9Y5G8 931 aa20.26■□□□□ 0.83
ABR-231ENST00000574875 A0A1W2PQF6 199 aa20.25■□□□□ 0.83
ABR-231ENST00000574875 GFRA2O00451 464 aa20.25■□□□□ 0.83
ABR-231ENST00000574875 CAPN9O14815 690 aa20.25■□□□□ 0.83
ABR-231ENST00000574875 FOXD2O60548 495 aaPredicted RBP20.25■□□□□ 0.83
ABR-231ENST00000574875 KRT9P35527 623 aa20.25■□□□□ 0.83
ABR-231ENST00000574875 SLC11A2P49281 568 aa20.25■□□□□ 0.83
ABR-231ENST00000574875 UBASH3AP57075 661 aa20.25■□□□□ 0.83
ABR-231ENST00000574875 BYSLQ13895 437 aaKnown RBP20.25■□□□□ 0.83
ABR-231ENST00000574875 CDKAL1Q5VV42 579 aa20.25■□□□□ 0.83
ABR-231ENST00000574875 SYPL2Q5VXT5 272 aa20.25■□□□□ 0.83
ABR-231ENST00000574875 PRR23CQ6ZRP0 262 aa20.25■□□□□ 0.83
ABR-231ENST00000574875 DQX1Q8TE96 717 aaKnown RBP20.25■□□□□ 0.83
ABR-231ENST00000574875 UCMAQ8WVF2 138 aa20.25■□□□□ 0.83
ABR-231ENST00000574875 RLN3Q8WXF3 142 aa20.25■□□□□ 0.83
ABR-231ENST00000574875 GABRG3Q99928 467 aa20.25■□□□□ 0.83
ABR-231ENST00000574875 TRIM62Q9BVG3 475 aa20.25■□□□□ 0.83
ABR-231ENST00000574875 XPO4Q9C0E2 1151 aaKnown RBP20.25■□□□□ 0.83
ABR-231ENST00000574875 LHX5Q9H2C1 402 aa20.25■□□□□ 0.83
ABR-231ENST00000574875 ZKSCAN5Q9Y2L8 839 aa20.25■□□□□ 0.83
ABR-231ENST00000574875 THADAQ6YHU6 1953 aa20.25■□□□□ 0.83
ABR-231ENST00000574875 GOLGA6L7A0A1B0GV03 622 aa20.24■□□□□ 0.83
ABR-231ENST00000574875 WASH3PC4AMC7 463 aa20.24■□□□□ 0.83
ABR-231ENST00000574875 MAP3K13O43283 966 aa20.24■□□□□ 0.83
ABR-231ENST00000574875 ACSL4O60488 711 aa20.24■□□□□ 0.83
ABR-231ENST00000574875 ZNF806P0C7X5 589 aa20.24■□□□□ 0.83
ABR-231ENST00000574875 MSNP26038 577 aaKnown RBP20.24■□□□□ 0.83
ABR-231ENST00000574875 P2RY2P41231 377 aa20.24■□□□□ 0.83
ABR-231ENST00000574875 BPIFB4P59827 614 aa20.24■□□□□ 0.83
ABR-231ENST00000574875 YWHAZP63104 245 aaKnown RBP20.24■□□□□ 0.83
ABR-231ENST00000574875 PDCLQ13371 301 aa20.24■□□□□ 0.83
ABR-231ENST00000574875 CCDC6Q16204 474 aa20.24■□□□□ 0.83
ABR-231ENST00000574875 KLHDC7AQ5VTJ3 777 aa20.24■□□□□ 0.83
ABR-231ENST00000574875 ANKS1BQ7Z6G8 1248 aa20.24■□□□□ 0.83
ABR-231ENST00000574875 SLC47A2Q86VL8 602 aa20.24■□□□□ 0.83
ABR-231ENST00000574875 FAM71AQ8IYT1 594 aa20.24■□□□□ 0.83
ABR-231ENST00000574875 SPC24Q8NBT2 197 aa20.24■□□□□ 0.83
ABR-231ENST00000574875 ANKRD20A12PQ8NF67 263 aa20.24■□□□□ 0.83
ABR-231ENST00000574875 IPO4Q8TEX9 1081 aaKnown RBP20.24■□□□□ 0.83
ABR-231ENST00000574875 PPP1R13BQ96KQ4 1090 aa20.24■□□□□ 0.83
ABR-231ENST00000574875 SERPINB11Q96P15 392 aa20.24■□□□□ 0.83
ABR-231ENST00000574875 ELOVL2Q9NXB9 296 aa20.24■□□□□ 0.83
ABR-231ENST00000574875 CACNA2D2Q9NY47 1150 aa20.24■□□□□ 0.83
ABR-231ENST00000574875 TLR6Q9Y2C9 796 aa20.24■□□□□ 0.83
ABR-231ENST00000574875 NPC1O15118 1278 aa20.23■□□□□ 0.83
ABR-231ENST00000574875 TIMM44O43615 452 aa20.23■□□□□ 0.83
ABR-231ENST00000574875 PNMA6AP0CW24 399 aaPredicted RBP20.23■□□□□ 0.83
ABR-231ENST00000574875 ATP1A3P13637 1013 aa20.23■□□□□ 0.83
ABR-231ENST00000574875 GABRG2P18507 467 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms