RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 NCKAP1Q9Y2A7 1128 aa12.52□□□□□ -0.41
CTNS-208ENST00000574218 RAI2Q9Y5P3 530 aa12.52□□□□□ -0.41
CTNS-208ENST00000574218 TEX51A0A1B0GUA7 166 aa12.51□□□□□ -0.41
CTNS-208ENST00000574218 YKT6O15498 198 aa12.51□□□□□ -0.41
CTNS-208ENST00000574218 TGFB1I1O43294 461 aa12.51□□□□□ -0.41
CTNS-208ENST00000574218 C1QL1O75973 258 aa12.51□□□□□ -0.41
CTNS-208ENST00000574218 C1SP09871 688 aa12.51□□□□□ -0.41
CTNS-208ENST00000574218 PDCP20941 246 aa12.51□□□□□ -0.41
CTNS-208ENST00000574218 CTSKP43235 329 aa12.51□□□□□ -0.41
CTNS-208ENST00000574218 ZBTB16Q05516 673 aa12.51□□□□□ -0.41
CTNS-208ENST00000574218 EFEMP1Q12805 493 aa12.51□□□□□ -0.41
CTNS-208ENST00000574218 SFSWAPQ12872 951 aaKnown RBP12.51□□□□□ -0.41
CTNS-208ENST00000574218 CAMK2GQ13555 558 aaPredicted RBP12.51□□□□□ -0.41
CTNS-208ENST00000574218 SGSM1Q2NKQ1 1148 aa12.51□□□□□ -0.41
CTNS-208ENST00000574218 LAYNQ6UX15 382 aa12.51□□□□□ -0.41
CTNS-208ENST00000574218 CLEC20AQ6ZU45 233 aa12.51□□□□□ -0.41
CTNS-208ENST00000574218 GPRIN1Q7Z2K8 1008 aa12.51□□□□□ -0.41
CTNS-208ENST00000574218 CRYBG2Q8N1P7 616 aa12.51□□□□□ -0.41
CTNS-208ENST00000574218 C12orf29Q8N999 325 aa12.51□□□□□ -0.41
CTNS-208ENST00000574218 WFIKKN2Q8TEU8 576 aa12.51□□□□□ -0.41
CTNS-208ENST00000574218 SORCS1Q8WY21 1168 aa12.51□□□□□ -0.41
CTNS-208ENST00000574218 GOLGA1Q92805 767 aa12.51□□□□□ -0.41
CTNS-208ENST00000574218 BIRC7Q96CA5 298 aa12.51□□□□□ -0.41
CTNS-208ENST00000574218 PIWIL1Q96J94 861 aaKnown RBP12.51□□□□□ -0.41
CTNS-208ENST00000574218 SDCBP2Q9H190 292 aa12.51□□□□□ -0.41
CTNS-208ENST00000574218 SGK2Q9HBY8 427 aa12.51□□□□□ -0.41
CTNS-208ENST00000574218 PPP4R2Q9NY27 417 aa12.51□□□□□ -0.41
CTNS-208ENST00000574218 ZNF462Q96JM2 2506 aa12.5□□□□□ -0.41
CTNS-208ENST00000574218 A0A1B0GTQ1 180 aa12.5□□□□□ -0.41
CTNS-208ENST00000574218 J3QKU1 62 aa12.5□□□□□ -0.41
CTNS-208ENST00000574218 PAPSS1O43252 624 aaPredicted RBP12.5□□□□□ -0.41
CTNS-208ENST00000574218 TLX3O43711 291 aaPredicted RBP12.5□□□□□ -0.41
CTNS-208ENST00000574218 HOXD13P35453 343 aa12.5□□□□□ -0.41
CTNS-208ENST00000574218 ACTN2P35609 894 aa12.5□□□□□ -0.41
CTNS-208ENST00000574218 CASP4P49662 377 aa12.5□□□□□ -0.41
CTNS-208ENST00000574218 CFHR1Q03591 330 aa12.5□□□□□ -0.41
CTNS-208ENST00000574218 TAF1BQ53T94 588 aaPredicted RBP12.5□□□□□ -0.41
CTNS-208ENST00000574218 HES3Q5TGS1 186 aa12.5□□□□□ -0.41
CTNS-208ENST00000574218 EPM2AIP1Q7L775 607 aaPredicted RBP12.5□□□□□ -0.41
CTNS-208ENST00000574218 CCDC186Q7Z3E2 898 aa12.5□□□□□ -0.41
CTNS-208ENST00000574218 DENND1CQ8IV53 801 aa12.5□□□□□ -0.41
CTNS-208ENST00000574218 ARHGAP18Q8N392 663 aa12.5□□□□□ -0.41
CTNS-208ENST00000574218 CPXM2Q8N436 756 aa12.5□□□□□ -0.41
CTNS-208ENST00000574218 ZNF843Q8N446 348 aa12.5□□□□□ -0.41
CTNS-208ENST00000574218 ZNF276Q8N554 614 aa12.5□□□□□ -0.41
CTNS-208ENST00000574218 GOLGA5Q8TBA6 731 aa12.5□□□□□ -0.41
CTNS-208ENST00000574218 TAF4BQ92750 862 aa12.5□□□□□ -0.41
CTNS-208ENST00000574218 CYFIP2Q96F07 1278 aa12.5□□□□□ -0.41
CTNS-208ENST00000574218 HNRNPABQ99729 332 aaKnown RBP12.5□□□□□ -0.41
CTNS-208ENST00000574218 IMPG2Q9BZV3 1241 aa12.5□□□□□ -0.41
CTNS-208ENST00000574218 NRSN2Q9GZP1 204 aa12.5□□□□□ -0.41
CTNS-208ENST00000574218 CUEDC2Q9H467 287 aa12.5□□□□□ -0.41
CTNS-208ENST00000574218 CLIC5Q9NZA1 410 aa12.5□□□□□ -0.41
CTNS-208ENST00000574218 TFIP11Q9UBB9 837 aaKnown RBP12.5□□□□□ -0.41
CTNS-208ENST00000574218 SLCO1B1Q9Y6L6 691 aa12.5□□□□□ -0.41
CTNS-208ENST00000574218 NYNRINQ9P2P1 1898 aaKnown RBP12.5□□□□□ -0.41
CTNS-208ENST00000574218 MAST4O15021 2626 aa12.5□□□□□ -0.41
CTNS-208ENST00000574218 A0A087X0B3 334 aa12.49□□□□□ -0.41
CTNS-208ENST00000574218 SLC12A8A0AV02 714 aa12.49□□□□□ -0.41
CTNS-208ENST00000574218 FAM47DPA6NHR8 397 aa12.49□□□□□ -0.41
CTNS-208ENST00000574218 TSPAN3O60637 253 aa12.49□□□□□ -0.41
CTNS-208ENST00000574218 KLKB1P03952 638 aa12.49□□□□□ -0.41
CTNS-208ENST00000574218 RPN1P04843 607 aaKnown RBP12.49□□□□□ -0.41
CTNS-208ENST00000574218 PIK3CAP42336 1068 aa12.49□□□□□ -0.41
CTNS-208ENST00000574218 RPS14P62263 151 aaKnown RBP12.49□□□□□ -0.41
CTNS-208ENST00000574218 RACK1P63244 317 aaKnown RBP12.49□□□□□ -0.41
CTNS-208ENST00000574218 CXADRP78310 365 aa12.49□□□□□ -0.41
CTNS-208ENST00000574218 TARDBPQ13148 414 aaKnown RBP eCLIP12.49□□□□□ -0.41
CTNS-208ENST00000574218 MPPE1Q53F39 396 aa12.49□□□□□ -0.41
CTNS-208ENST00000574218 ZNF776Q68DI1 518 aaPredicted RBP12.49□□□□□ -0.41
CTNS-208ENST00000574218 GATAD2AQ86YP4 633 aa12.49□□□□□ -0.41
CTNS-208ENST00000574218 SNIP1Q8TAD8 396 aaKnown RBP12.49□□□□□ -0.41
CTNS-208ENST00000574218 CYB5D2Q8WUJ1 264 aa12.49□□□□□ -0.41
CTNS-208ENST00000574218 FGF11Q92914 225 aa12.49□□□□□ -0.41
CTNS-208ENST00000574218 TMEM176AQ96HP8 235 aa12.49□□□□□ -0.41
CTNS-208ENST00000574218 ELF4Q99607 663 aaPredicted RBP12.49□□□□□ -0.41
CTNS-208ENST00000574218 NT5C1AQ9BXI3 368 aa12.49□□□□□ -0.41
CTNS-208ENST00000574218 AASDHPPTQ9NRN7 309 aa12.49□□□□□ -0.41
CTNS-208ENST00000574218 MARCH2Q9P0N8 246 aa12.49□□□□□ -0.41
CTNS-208ENST00000574218 HMGXB4Q9UGU5 601 aa12.49□□□□□ -0.41
CTNS-208ENST00000574218 SUN2Q9UH99 717 aa12.49□□□□□ -0.41
CTNS-208ENST00000574218 AGO1Q9UL18 857 aaKnown RBP12.49□□□□□ -0.41
CTNS-208ENST00000574218 COL6A6A6NMZ7 2263 aa12.49□□□□□ -0.41
CTNS-208ENST00000574218 LRRIQ3A6PVS8 624 aaPredicted RBP12.48□□□□□ -0.41
CTNS-208ENST00000574218 VILLO15195 856 aa12.48□□□□□ -0.41
CTNS-208ENST00000574218 RNASEH1O60930 286 aaKnown RBP12.48□□□□□ -0.41
CTNS-208ENST00000574218 ATP5BP06576 529 aaKnown RBP12.48□□□□□ -0.41
CTNS-208ENST00000574218 ARRB1P49407 418 aaPredicted RBP12.48□□□□□ -0.41
CTNS-208ENST00000574218 HARS2P49590 506 aaKnown RBP12.48□□□□□ -0.41
CTNS-208ENST00000574218 KIF11P52732 1056 aa12.48□□□□□ -0.41
CTNS-208ENST00000574218 ZNF445P59923 1031 aa12.48□□□□□ -0.41
CTNS-208ENST00000574218 CCDC173Q0VFZ6 552 aa12.48□□□□□ -0.41
CTNS-208ENST00000574218 DNAJC3Q13217 504 aa12.48□□□□□ -0.41
CTNS-208ENST00000574218 SLC45A4Q5BKX6 768 aa12.48□□□□□ -0.41
CTNS-208ENST00000574218 BROXQ5VW32 411 aa12.48□□□□□ -0.41
CTNS-208ENST00000574218 KIAA0895LQ68EN5 471 aa12.48□□□□□ -0.41
CTNS-208ENST00000574218 CHST9Q7L1S5 443 aa12.48□□□□□ -0.41
CTNS-208ENST00000574218 C12orf56Q8IXR9 622 aa12.48□□□□□ -0.41
CTNS-208ENST00000574218 AHI1Q8N157 1196 aa12.48□□□□□ -0.41
CTNS-208ENST00000574218 EID2Q8N6I1 236 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms