RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 ASB7Q9H672 318 aa19.67■□□□□ 0.74
SCARF1-206ENST00000573852 MFHAS1Q9Y4C4 1052 aa19.67■□□□□ 0.74
SCARF1-206ENST00000573852 MYO18AQ92614 2054 aaKnown RBP19.66■□□□□ 0.74
SCARF1-206ENST00000573852 TPP1O14773 563 aa19.66■□□□□ 0.74
SCARF1-206ENST00000573852 MCF2P10911 925 aa19.66■□□□□ 0.74
SCARF1-206ENST00000573852 SEMA5AQ13591 1074 aa19.66■□□□□ 0.74
SCARF1-206ENST00000573852 PDE1CQ14123 709 aaPredicted RBP19.66■□□□□ 0.74
SCARF1-206ENST00000573852 HIC1Q14526 733 aa19.66■□□□□ 0.74
SCARF1-206ENST00000573852 DPY19L2Q6NUT2 758 aa19.66■□□□□ 0.74
SCARF1-206ENST00000573852 MAVSQ7Z434 540 aa19.66■□□□□ 0.74
SCARF1-206ENST00000573852 SPATA33Q96N06 139 aa19.66■□□□□ 0.74
SCARF1-206ENST00000573852 TRAPPC9Q96Q05 1148 aa19.66■□□□□ 0.74
SCARF1-206ENST00000573852 PRMT7Q9NVM4 692 aaPredicted RBP19.66■□□□□ 0.74
SCARF1-206ENST00000573852 PIH1D1Q9NWS0 290 aaKnown RBP19.66■□□□□ 0.74
SCARF1-206ENST00000573852 KIAA1257Q9ULG3 409 aa19.66■□□□□ 0.74
SCARF1-206ENST00000573852 SORCS3Q9UPU3 1222 aa19.66■□□□□ 0.74
SCARF1-206ENST00000573852 ARHGAP42A6NI28 874 aa19.66■□□□□ 0.74
SCARF1-206ENST00000573852 NFKBIEO00221 500 aa19.66■□□□□ 0.74
SCARF1-206ENST00000573852 PKDCCQ504Y2 493 aa19.66■□□□□ 0.74
SCARF1-206ENST00000573852 DENND5BQ6ZUT9 1274 aa19.66■□□□□ 0.74
SCARF1-206ENST00000573852 RAPH1Q70E73 1250 aa19.66■□□□□ 0.74
SCARF1-206ENST00000573852 SLC4A5Q9BY07 1137 aa19.66■□□□□ 0.74
SCARF1-206ENST00000573852 FAM49BQ9NUQ9 324 aa19.66■□□□□ 0.74
SCARF1-206ENST00000573852 HESX1Q9UBX0 185 aa19.66■□□□□ 0.74
SCARF1-206ENST00000573852 PLIN3O60664 434 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 SORBS2O94875 1100 aaKnown RBP19.65■□□□□ 0.74
SCARF1-206ENST00000573852 PGK2P07205 417 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 IGBP1P78318 339 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 SMAD1Q15797 465 aaKnown RBP19.65■□□□□ 0.74
SCARF1-206ENST00000573852 SH3D19Q5HYK7 790 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 STXBP5Q5T5C0 1151 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 STEAP4Q687X5 459 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 CASC4Q6P4E1 433 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 ACOT1Q86TX2 421 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 PYDC1Q8WXC3 89 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 QKIQ96PU8 341 aaKnown RBP eCLIP19.65■□□□□ 0.74
SCARF1-206ENST00000573852 TUBGCP5Q96RT8 1024 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 SPATC1LQ9H0A9 340 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 S100A14Q9HCY8 104 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 XPNPEP3Q9NQH7 507 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 PNPOQ9NVS9 261 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 MTMR10Q9NXD2 777 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 DPP3Q9NY33 737 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 PIM2Q9P1W9 311 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 PDP2Q9P2J9 529 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 APOBEC2Q9Y235 224 aaKnown RBP19.65■□□□□ 0.74
SCARF1-206ENST00000573852 A0A0G2JMZ2 1700 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 LRRC37A2A6NM11 1700 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 WDR90Q96KV7 1748 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 A0A087WZ62 844 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 FKBP6O75344 327 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 ALDH1A2O94788 518 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 CNTFP26441 200 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 ARRB2P32121 409 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 ROR2Q01974 943 aaKnown RBP19.65■□□□□ 0.74
SCARF1-206ENST00000573852 NIPAL4Q0D2K0 466 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 PCLAFQ15004 111 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 PACS1Q6VY07 963 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 RNF111Q6ZNA4 994 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 CYS1Q717R9 158 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 MARK2Q7KZI7 788 aaKnown RBP19.65■□□□□ 0.74
SCARF1-206ENST00000573852 TMEM110Q86TL2 294 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 FDXACB1Q9BRP7 624 aaPredicted RBP19.65■□□□□ 0.74
SCARF1-206ENST00000573852 RNPEPQ9H4A4 650 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 PSAT1Q9Y617 370 aa19.65■□□□□ 0.74
SCARF1-206ENST00000573852 SIN3BO75182 1162 aa19.64■□□□□ 0.73
SCARF1-206ENST00000573852 PRKCGP05129 697 aa19.64■□□□□ 0.73
SCARF1-206ENST00000573852 GMPRP36959 345 aa19.64■□□□□ 0.73
SCARF1-206ENST00000573852 POLE2P56282 527 aa19.64■□□□□ 0.73
SCARF1-206ENST00000573852 INHBEP58166 350 aa19.64■□□□□ 0.73
SCARF1-206ENST00000573852 RBP5P82980 135 aa19.64■□□□□ 0.73
SCARF1-206ENST00000573852 TNFAIP2Q03169 654 aa19.64■□□□□ 0.73
SCARF1-206ENST00000573852 DPYSL2Q16555 572 aa19.64■□□□□ 0.73
SCARF1-206ENST00000573852 EFHC1Q5JVL4 640 aa19.64■□□□□ 0.73
SCARF1-206ENST00000573852 RSPH3Q86UC2 560 aa19.64■□□□□ 0.73
SCARF1-206ENST00000573852 CLEC4CQ8WTT0 213 aa19.64■□□□□ 0.73
SCARF1-206ENST00000573852 FGD4Q96M96 766 aa19.64■□□□□ 0.73
SCARF1-206ENST00000573852 SIKE1Q9BRV8 207 aa19.64■□□□□ 0.73
SCARF1-206ENST00000573852 SHCBP1LQ9BZQ2 653 aa19.64■□□□□ 0.73
SCARF1-206ENST00000573852 VAV1P15498 845 aa19.64■□□□□ 0.73
SCARF1-206ENST00000573852 DBN1Q16643 649 aa19.64■□□□□ 0.73
SCARF1-206ENST00000573852 HEATR6Q6AI08 1181 aaKnown RBP19.64■□□□□ 0.73
SCARF1-206ENST00000573852 C10orf107Q8IVU9 208 aa19.64■□□□□ 0.73
SCARF1-206ENST00000573852 MFN1Q8IWA4 741 aa19.64■□□□□ 0.73
SCARF1-206ENST00000573852 SLC35F5Q8WV83 523 aa19.64■□□□□ 0.73
SCARF1-206ENST00000573852 CLMNQ96JQ2 1002 aa19.64■□□□□ 0.73
SCARF1-206ENST00000573852 SORT1Q99523 831 aa19.64■□□□□ 0.73
SCARF1-206ENST00000573852 LPIN3Q9BQK8 851 aa19.64■□□□□ 0.73
SCARF1-206ENST00000573852 MRPL45Q9BRJ2 306 aaKnown RBP19.64■□□□□ 0.73
SCARF1-206ENST00000573852 GCOM2Q9BZD3 368 aaPredicted RBP19.64■□□□□ 0.73
SCARF1-206ENST00000573852 DTLQ9NZJ0 730 aa19.64■□□□□ 0.73
SCARF1-206ENST00000573852 NME7Q9Y5B8 376 aa19.64■□□□□ 0.73
SCARF1-206ENST00000573852 ZNF487B1APH4 448 aa19.63■□□□□ 0.73
SCARF1-206ENST00000573852 GLRA3O75311 464 aa19.63■□□□□ 0.73
SCARF1-206ENST00000573852 KLHL2O95198 593 aa19.63■□□□□ 0.73
SCARF1-206ENST00000573852 C22orf31O95567 290 aa19.63■□□□□ 0.73
SCARF1-206ENST00000573852 ARF4P18085 180 aaPredicted RBP19.63■□□□□ 0.73
SCARF1-206ENST00000573852 PHKA2P46019 1235 aa19.63■□□□□ 0.73
SCARF1-206ENST00000573852 IDH3AP50213 366 aa19.63■□□□□ 0.73
SCARF1-206ENST00000573852 ACMSDQ8TDX5 336 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms