RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 FDFT1P37268 417 aa10.82□□□□□ -0.68
CHRNB1-205ENST00000573209 ANKRD39Q53RE8 183 aa10.82□□□□□ -0.68
CHRNB1-205ENST00000573209 MOXD1Q6UVY6 613 aa10.82□□□□□ -0.68
CHRNB1-205ENST00000573209 MRPL10Q7Z7H8 261 aaKnown RBP10.82□□□□□ -0.68
CHRNB1-205ENST00000573209 ADGRF4Q8IZF3 695 aa10.82□□□□□ -0.68
CHRNB1-205ENST00000573209 LRRC47Q8N1G4 583 aaKnown RBP10.82□□□□□ -0.68
CHRNB1-205ENST00000573209 ANKRD42Q8N9B4 389 aa10.82□□□□□ -0.68
CHRNB1-205ENST00000573209 CATSPER1Q8NEC5 780 aa10.82□□□□□ -0.68
CHRNB1-205ENST00000573209 PSPC1Q8WXF1 523 aaKnown RBP10.82□□□□□ -0.68
CHRNB1-205ENST00000573209 ERLEC1Q96DZ1 483 aa10.82□□□□□ -0.68
CHRNB1-205ENST00000573209 FAM161BQ96MY7 647 aa10.82□□□□□ -0.68
CHRNB1-205ENST00000573209 OPALINQ96PE5 141 aa10.82□□□□□ -0.68
CHRNB1-205ENST00000573209 CDK5RAP1Q96SZ6 601 aaKnown RBP10.82□□□□□ -0.68
CHRNB1-205ENST00000573209 SLC29A1Q99808 456 aa10.82□□□□□ -0.68
CHRNB1-205ENST00000573209 HEMGNQ9BXL5 484 aa10.82□□□□□ -0.68
CHRNB1-205ENST00000573209 SLC4A5Q9BY07 1137 aa10.82□□□□□ -0.68
CHRNB1-205ENST00000573209 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.82□□□□□ -0.68
CHRNB1-205ENST00000573209 NTN4Q9HB63 628 aa10.82□□□□□ -0.68
CHRNB1-205ENST00000573209 GMEB2Q9UKD1 530 aa10.82□□□□□ -0.68
CHRNB1-205ENST00000573209 ATF5Q9Y2D1 282 aaPredicted RBP10.82□□□□□ -0.68
CHRNB1-205ENST00000573209 UBR3Q6ZT12 1888 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 SOCS7O14512 581 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 ZBTB5O15062 677 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 MSI1O43347 362 aaKnown RBP10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 USP1O94782 785 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 KRT3P12035 628 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 ITIH1P19827 911 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 PSMA4P25789 261 aaKnown RBP10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 RPA1P27694 616 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 AXLP30530 894 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 ENPEPQ07075 957 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 SCRN3Q0VDG4 424 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 KCNH2Q12809 1159 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 SNAPC2Q13487 334 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 UBE2SQ16763 222 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 DUSP7Q16829 419 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 SNAP47Q5SQN1 464 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 RIPOR1Q6ZS17 1223 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 EEPD1Q7L9B9 569 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 GPR180Q86V85 440 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 CDR2LQ86X02 465 aaPredicted RBP10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 SLFN12Q8IYM2 578 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 SIMC1Q8NDZ2 872 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 FANK1Q8TC84 345 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 TP53INP1Q96A56 240 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 CIDECQ96AQ7 238 aaPredicted RBP10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 RPRD1AQ96P16 312 aaPredicted RBP10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 TARS2Q9BW92 718 aaKnown RBP10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 GON7Q9BXV9 100 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 HIPK3Q9H422 1215 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 THG1LQ9NWX6 298 aaKnown RBP10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 ADAMTS1Q9UHI8 967 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 DPP7Q9UHL4 492 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 PPM1HQ9ULR3 514 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 PHTF1Q9UMS5 762 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 CYP3A7-CYP3A51PA0A087WV96 503 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 ZNF839A8K0R7 811 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 PGRMC1O00264 195 aaKnown RBP10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 TRDMT1O14717 391 aaKnown RBP10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 TLR3O15455 904 aaKnown RBP10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 PPP1R11O60927 126 aaPredicted RBP10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 ECDO95905 644 aaPredicted RBP10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 APBA3O96018 575 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 CYP3A7P24462 503 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 HCAR3P49019 387 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 YWHAGP61981 247 aaKnown RBP eCLIP10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 PPM1LQ5SGD2 360 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 MFSD14BQ5SR56 506 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 RGS9BPQ6ZS82 235 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 GPIHBP1Q8IV16 184 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 DEPDC4Q8N2C3 294 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 LRRC57Q8N9N7 239 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 SLC4A11Q8NBS3 891 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 GDPD5Q8WTR4 605 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 RSAD2Q8WXG1 361 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 TOE1Q96GM8 510 aaKnown RBP10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 TXNDC15Q96J42 360 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 MBOAT7Q96N66 472 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 TUBA1CQ9BQE3 449 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 BEGAINQ9BUH8 593 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 APOL5Q9BWW9 433 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 BTBD2Q9BX70 525 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 PACSIN1Q9BY11 444 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 NIFKQ9BYG3 293 aaKnown RBP10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 FGFBP2Q9BYJ0 223 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 MBD2Q9UBB5 411 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 PFDN2Q9UHV9 154 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 GGA1Q9UJY5 639 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 HDAC9Q9UKV0 1011 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 NENFQ9UMX5 172 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 KIAA1024Q9UPX6 916 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 SIPA1L1O43166 1804 aa10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 RBBP6Q7Z6E9 1792 aaKnown RBP10.81□□□□□ -0.68
CHRNB1-205ENST00000573209 KCNK3O14649 394 aa10.8□□□□□ -0.68
CHRNB1-205ENST00000573209 SLC16A3O15427 465 aaKnown RBP10.8□□□□□ -0.68
CHRNB1-205ENST00000573209 PI15O43692 258 aa10.8□□□□□ -0.68
CHRNB1-205ENST00000573209 KRT18P05783 430 aaKnown RBP10.8□□□□□ -0.68
CHRNB1-205ENST00000573209 SRGAP2CP0DJJ0 459 aa10.8□□□□□ -0.68
CHRNB1-205ENST00000573209 DBTP11182 482 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms