RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 LETM1O95202 739 aaPredicted RBP18.04■□□□□ 0.48
SMG6-212ENST00000573153 PNMA6AP0CW24 399 aaPredicted RBP18.04■□□□□ 0.48
SMG6-212ENST00000573153 KRT5P13647 590 aa18.04■□□□□ 0.48
SMG6-212ENST00000573153 HLA-FP30511 346 aa18.04■□□□□ 0.48
SMG6-212ENST00000573153 PTGER3P43115 390 aa18.04■□□□□ 0.48
SMG6-212ENST00000573153 RING1Q06587 406 aa18.04■□□□□ 0.48
SMG6-212ENST00000573153 SYPL2Q5VXT5 272 aa18.04■□□□□ 0.48
SMG6-212ENST00000573153 PEAR1Q5VY43 1037 aaPredicted RBP18.04■□□□□ 0.48
SMG6-212ENST00000573153 BEND5Q7L4P6 421 aa18.04■□□□□ 0.48
SMG6-212ENST00000573153 TRMT11Q7Z4G4 463 aaKnown RBP18.04■□□□□ 0.48
SMG6-212ENST00000573153 SCUBE3Q8IX30 993 aa18.04■□□□□ 0.48
SMG6-212ENST00000573153 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.04■□□□□ 0.48
SMG6-212ENST00000573153 MIS12Q9H081 205 aa18.04■□□□□ 0.48
SMG6-212ENST00000573153 NDST4Q9H3R1 872 aa18.04■□□□□ 0.48
SMG6-212ENST00000573153 VPS45Q9NRW7 570 aa18.04■□□□□ 0.48
SMG6-212ENST00000573153 CDV3Q9UKY7 258 aaKnown RBP18.04■□□□□ 0.48
SMG6-212ENST00000573153 NAALADL1Q9UQQ1 740 aa18.04■□□□□ 0.48
SMG6-212ENST00000573153 STON1Q9Y6Q2 735 aa18.04■□□□□ 0.48
SMG6-212ENST00000573153 IGHV1OR15-9A0A0B4J2B8 117 aa18.03■□□□□ 0.48
SMG6-212ENST00000573153 GOLGA6L7A0A1B0GV03 622 aa18.03■□□□□ 0.48
SMG6-212ENST00000573153 PATE3B3GLJ2 98 aa18.03■□□□□ 0.48
SMG6-212ENST00000573153 MED7O43513 233 aa18.03■□□□□ 0.48
SMG6-212ENST00000573153 ALDH1A2O94788 518 aa18.03■□□□□ 0.48
SMG6-212ENST00000573153 RHOBTB1O94844 696 aa18.03■□□□□ 0.48
SMG6-212ENST00000573153 PDCLQ13371 301 aa18.03■□□□□ 0.48
SMG6-212ENST00000573153 ELF2Q15723 593 aa18.03■□□□□ 0.48
SMG6-212ENST00000573153 TAC4Q86UU9 113 aa18.03■□□□□ 0.48
SMG6-212ENST00000573153 C11orf74Q86VG3 221 aa18.03■□□□□ 0.48
SMG6-212ENST00000573153 CHPFQ8IZ52 775 aa18.03■□□□□ 0.48
SMG6-212ENST00000573153 RNF139Q8WU17 664 aa18.03■□□□□ 0.48
SMG6-212ENST00000573153 SORCS1Q8WY21 1168 aa18.03■□□□□ 0.48
SMG6-212ENST00000573153 ERLEC1Q96DZ1 483 aa18.03■□□□□ 0.48
SMG6-212ENST00000573153 MRGPRX1Q96LB2 322 aa18.03■□□□□ 0.48
SMG6-212ENST00000573153 TUBGCP2Q9BSJ2 902 aa18.03■□□□□ 0.48
SMG6-212ENST00000573153 SAMSN1Q9NSI8 373 aaKnown RBP18.03■□□□□ 0.48
SMG6-212ENST00000573153 TMEM74BQ9NUR3 256 aa18.03■□□□□ 0.48
SMG6-212ENST00000573153 XPO7Q9UIA9 1087 aaKnown RBP18.03■□□□□ 0.48
SMG6-212ENST00000573153 LNP1A1A4G5 178 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 GOLGA6L22H0YM25 854 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 TSPAN3O60637 253 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 PRKCHP24723 683 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 EEF1GP26641 437 aaKnown RBP18.02■□□□□ 0.48
SMG6-212ENST00000573153 GNA15P30679 374 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 GBP1P32455 592 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 CLCN1P35523 988 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 ACADSBP45954 432 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 NNTQ13423 1086 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 TAF5Q15542 800 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 PTPRNQ16849 979 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 ARHGAP44Q17R89 818 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 FUT11Q495W5 492 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 VWA3BQ502W6 1294 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 MPPE1Q53F39 396 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 ADGRF1Q5T601 910 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 PIK3R6Q5UE93 754 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 RFWD3Q6PCD5 774 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 NUDT18Q6ZVK8 323 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 ANKS1BQ7Z6G8 1248 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 ADIPOR2Q86V24 386 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 CREBRFQ8IUR6 639 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 ENOX1Q8TC92 643 aaKnown RBP18.02■□□□□ 0.48
SMG6-212ENST00000573153 AZIN2Q96A70 460 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 CPXM1Q96SM3 734 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 NAA15Q9BXJ9 866 aaKnown RBP18.02■□□□□ 0.48
SMG6-212ENST00000573153 SLC2A11Q9BYW1 496 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 MKRN2Q9H000 416 aaKnown RBP18.02■□□□□ 0.48
SMG6-212ENST00000573153 ELOVL2Q9NXB9 296 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 PCDHGC3Q9UN70 934 aa18.02■□□□□ 0.48
SMG6-212ENST00000573153 PCDH15Q96QU1 1955 aa18.02■□□□□ 0.47
SMG6-212ENST00000573153 SPTBN2O15020 2390 aa18.01■□□□□ 0.47
SMG6-212ENST00000573153 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.01■□□□□ 0.47
SMG6-212ENST00000573153 FOXN3O00409 490 aaPredicted RBP18.01■□□□□ 0.47
SMG6-212ENST00000573153 IRAK2O43187 625 aa18.01■□□□□ 0.47
SMG6-212ENST00000573153 SART1O43290 800 aaKnown RBP18.01■□□□□ 0.47
SMG6-212ENST00000573153 THAP12O43422 761 aa18.01■□□□□ 0.47
SMG6-212ENST00000573153 ACSL4O60488 711 aa18.01■□□□□ 0.47
SMG6-212ENST00000573153 FOXD2O60548 495 aaPredicted RBP18.01■□□□□ 0.47
SMG6-212ENST00000573153 CAVIN2O95810 425 aa18.01■□□□□ 0.47
SMG6-212ENST00000573153 SDHBP21912 280 aa18.01■□□□□ 0.47
SMG6-212ENST00000573153 HARS2P49590 506 aaKnown RBP18.01■□□□□ 0.47
SMG6-212ENST00000573153 COPAP53621 1224 aa18.01■□□□□ 0.47
SMG6-212ENST00000573153 CREB5Q02930 508 aa18.01■□□□□ 0.47
SMG6-212ENST00000573153 ZNF234Q14588 700 aa18.01■□□□□ 0.47
SMG6-212ENST00000573153 HSP90AA4PQ58FG1 418 aa18.01■□□□□ 0.47
SMG6-212ENST00000573153 OTUD1Q5VV17 481 aaPredicted RBP18.01■□□□□ 0.47
SMG6-212ENST00000573153 SLC41A1Q8IVJ1 513 aa18.01■□□□□ 0.47
SMG6-212ENST00000573153 TMEFF1Q8IYR6 380 aa18.01■□□□□ 0.47
SMG6-212ENST00000573153 FAM71AQ8IYT1 594 aa18.01■□□□□ 0.47
SMG6-212ENST00000573153 ADAM33Q9BZ11 813 aa18.01■□□□□ 0.47
SMG6-212ENST00000573153 DNAJC12Q9UKB3 198 aa18.01■□□□□ 0.47
SMG6-212ENST00000573153 KCNJ18B7U540 433 aa18■□□□□ 0.47
SMG6-212ENST00000573153 NCAM1P13591 858 aa18■□□□□ 0.47
SMG6-212ENST00000573153 TBX4P57082 545 aa18■□□□□ 0.47
SMG6-212ENST00000573153 ZNF445P59923 1031 aa18■□□□□ 0.47
SMG6-212ENST00000573153 KCNJ12Q14500 433 aa18■□□□□ 0.47
SMG6-212ENST00000573153 EIF4HQ15056 248 aaKnown RBP18■□□□□ 0.47
SMG6-212ENST00000573153 TCP11X2Q5H9J9 407 aa18■□□□□ 0.47
SMG6-212ENST00000573153 MPP7Q5T2T1 576 aa18■□□□□ 0.47
SMG6-212ENST00000573153 STPG1Q5TH74 334 aa18■□□□□ 0.47
SMG6-212ENST00000573153 CDKAL1Q5VV42 579 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms