RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 LRRC23Q53EV4 343 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 SGO2Q562F6 1265 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 CYP4A22Q5TCH4 519 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 RAP1GAP2Q684P5 730 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 MTHFD1LQ6UB35 978 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 LRSAM1Q6UWE0 723 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 ISLR2Q6UXK2 745 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 MARK2Q7KZI7 788 aaKnown RBP5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 CHST9Q7L1S5 443 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 TMC3Q7Z5M5 1100 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 RSPH3Q86UC2 560 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 HOOK3Q86VS8 718 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 SPATA24Q86W54 205 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 CEP57Q86XR8 500 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 MIB1Q86YT6 1006 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 CCDC28AQ8IWP9 274 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 ARL14Q8N4G2 192 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 POU5F2Q8N7G0 328 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 ANKRD44Q8N8A2 993 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 DCBLD1Q8N8Z6 715 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 FAM184AQ8NB25 1140 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 ATAD1Q8NBU5 361 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 GLB1L3Q8NCI6 653 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 OR8K3Q8NH51 312 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 URGCPQ8TCY9 931 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 DUSP19Q8WTR2 217 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 SPACA9Q96E40 222 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 ALG14Q96F25 216 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 ERO1AQ96HE7 468 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 GAL3ST4Q96RP7 486 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 GAL3ST1Q99999 423 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 CCDC106Q9BWC9 280 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 TEX13AQ9BXU3 409 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 ASCC2Q9H1I8 757 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 SH2D4AQ9H788 454 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 TTC12Q9H892 705 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 MANSC1Q9H8J5 431 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 IL21RQ9HBE5 538 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 GDAP2Q9NXN4 497 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 CYP39A1Q9NYL5 469 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 TMOD2Q9NZR1 351 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 CRIM1Q9NZV1 1036 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 SLC25A10Q9UBX3 287 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 SLCO3A1Q9UIG8 710 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 OSGIN1Q9UJX0 560 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 KCND3Q9UK17 655 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 TLK1Q9UKI8 766 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 SARDHQ9UL12 918 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 PSME2Q9UL46 239 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 TTC41PQ6P2S7 1318 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 CTDSP2O14595 271 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 TO15178 435 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 NKRFO15226 690 aaKnown RBP eCLIP5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 TMPRSS2O15393 492 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 TGFB1I1O43294 461 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 BUB1O43683 1085 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 VEGFDO43915 354 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 GMFGO60234 142 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 SIX3O95343 332 aaPredicted RBP5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 C22orf31O95567 290 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 FGFR1OPO95684 399 aaKnown RBP5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 ABHD16AO95870 558 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 CYP1A2P05177 515 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 RB1P06400 928 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 ANXA6P08133 673 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 POLR2MP0CAP2 368 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 PECAM1P16284 738 aaPredicted RBP5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 CDH3P22223 829 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 MCM3P25205 808 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 PRDX5P30044 214 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 DHPSP49366 369 aaPredicted RBP5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 GPR15P49685 360 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 CAPZA1P52907 286 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 CDH8P55286 799 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 TRA2BP62995 288 aaKnown RBP5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 CYP4F8P98187 520 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 TLE1Q04724 770 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 ELP6Q0PNE2 266 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 ALCAMQ13740 583 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 IDI1Q13907 227 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 BAATQ14032 418 aaPredicted RBP5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 DPYSL2Q16555 572 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 AAK1Q2M2I8 961 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 BTBD16Q32M84 506 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 CCDC152Q4G0S7 254 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 CCDC178Q5BJE1 867 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 TCTE1Q5JU00 501 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 FCRLBQ6BAA4 426 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 HMBOX1Q6NT76 420 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 MRNIPQ6NTE8 343 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 RINT1Q6NUQ1 792 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 ZCCHC12Q6PEW1 402 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 TMEM270Q6UE05 265 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 KANSL1Q7Z3B3 1105 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 ARMC9Q7Z3E5 817 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 DSG4Q86SJ6 1040 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 TLK2Q86UE8 772 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 RASGRP3Q8IV61 690 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms