RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 STK33Q9BYT3 514 aa15.15■□□□□ 0.02
LITAF-208ENST00000571627 LHX5Q9H2C1 402 aa15.15■□□□□ 0.02
LITAF-208ENST00000571627 FAM207AQ9NSI2 230 aaPredicted RBP15.15■□□□□ 0.02
LITAF-208ENST00000571627 EBF1Q9UH73 591 aa15.15■□□□□ 0.02
LITAF-208ENST00000571627 FBXO10Q9UK96 956 aa15.15■□□□□ 0.02
LITAF-208ENST00000571627 GMEB2Q9UKD1 530 aa15.15■□□□□ 0.02
LITAF-208ENST00000571627 THADAQ6YHU6 1953 aa15.15■□□□□ 0.02
LITAF-208ENST00000571627 GOLGA6L7A0A1B0GV03 622 aa15.14■□□□□ 0.01
LITAF-208ENST00000571627 EPHB6O15197 1021 aa15.14■□□□□ 0.01
LITAF-208ENST00000571627 GRAP2O75791 330 aa15.14■□□□□ 0.01
LITAF-208ENST00000571627 ERBB2P04626 1255 aa15.14■□□□□ 0.01
LITAF-208ENST00000571627 ATP1A3P13637 1013 aa15.14■□□□□ 0.01
LITAF-208ENST00000571627 CYP11B1P15538 503 aa15.14■□□□□ 0.01
LITAF-208ENST00000571627 HOXD9P28356 352 aaPredicted RBP15.14■□□□□ 0.01
LITAF-208ENST00000571627 SLC6A4P31645 630 aa15.14■□□□□ 0.01
LITAF-208ENST00000571627 YWHAZP63104 245 aaKnown RBP15.14■□□□□ 0.01
LITAF-208ENST00000571627 SYCP1Q15431 976 aa15.14■□□□□ 0.01
LITAF-208ENST00000571627 PTPN20Q4JDL3 420 aa15.14■□□□□ 0.01
LITAF-208ENST00000571627 FILIP1LQ4L180 1135 aa15.14■□□□□ 0.01
LITAF-208ENST00000571627 ADGRF1Q5T601 910 aa15.14■□□□□ 0.01
LITAF-208ENST00000571627 NADSYN1Q6IA69 706 aa15.14■□□□□ 0.01
LITAF-208ENST00000571627 APTXQ7Z2E3 356 aaKnown RBP15.14■□□□□ 0.01
LITAF-208ENST00000571627 NOP9Q86U38 636 aaKnown RBP15.14■□□□□ 0.01
LITAF-208ENST00000571627 RASSF3Q86WH2 238 aa15.14■□□□□ 0.01
LITAF-208ENST00000571627 FCRL2Q96LA5 508 aaPredicted RBP15.14■□□□□ 0.01
LITAF-208ENST00000571627 PCMTD1Q96MG8 357 aaPredicted RBP15.14■□□□□ 0.01
LITAF-208ENST00000571627 ERGIC2Q96RQ1 377 aa15.14■□□□□ 0.01
LITAF-208ENST00000571627 POPDC2Q9HBU9 364 aa15.14■□□□□ 0.01
LITAF-208ENST00000571627 PARD6AQ9NPB6 346 aa15.14■□□□□ 0.01
LITAF-208ENST00000571627 SIK3Q9Y2K2 1263 aa15.14■□□□□ 0.01
LITAF-208ENST00000571627 PLXND1Q9Y4D7 1925 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 TCRBV21S2A2A0A5A6 115 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 GFRA2O00451 464 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 LATS1O95835 1130 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 MOCS2O96007 188 aaPredicted RBP15.13■□□□□ 0.01
LITAF-208ENST00000571627 HOXB2P14652 356 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 NTSR1P30989 418 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 SLC11A2P49281 568 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 POLR2FP61218 127 aaKnown RBP15.13■□□□□ 0.01
LITAF-208ENST00000571627 RING1Q06587 406 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 SPEM2Q0P670 501 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 MPPE1Q53F39 396 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 FAM133BQ5BKY9 247 aaKnown RBP15.13■□□□□ 0.01
LITAF-208ENST00000571627 NUGGCQ68CJ6 796 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 OR6B2Q6IFH4 312 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 TRMT11Q7Z4G4 463 aaKnown RBP15.13■□□□□ 0.01
LITAF-208ENST00000571627 UNC45BQ8IWX7 931 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 CHPFQ8IZ52 775 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 NEK11Q8NG66 645 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 KCNV2Q8TDN2 545 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 HMGB4Q8WW32 186 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 SERPINB11Q96P15 392 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 NOX5Q96PH1 765 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 TRIM62Q9BVG3 475 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 PDCL3Q9H2J4 239 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 SYNCQ9H7C4 482 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 CBX8Q9HC52 389 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 POLMQ9NP87 494 aaPredicted RBP15.13■□□□□ 0.01
LITAF-208ENST00000571627 NLRC4Q9NPP4 1024 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 CACNA2D2Q9NY47 1150 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 BCCIPQ9P287 314 aaKnown RBP eCLIP15.13■□□□□ 0.01
LITAF-208ENST00000571627 XPO7Q9UIA9 1087 aaKnown RBP15.13■□□□□ 0.01
LITAF-208ENST00000571627 STOML2Q9UJZ1 356 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 USP18Q9UMW8 372 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 TLR6Q9Y2C9 796 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 SLC27A6Q9Y2P4 619 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 STARD13Q9Y3M8 1113 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 CEP83Q9Y592 693 aa15.13■□□□□ 0.01
LITAF-208ENST00000571627 NUP205Q92621 2012 aa15.12■□□□□ 0.01
LITAF-208ENST00000571627 MUC22E2RYF6 1773 aaPredicted RBP15.12■□□□□ 0.01
LITAF-208ENST00000571627 WASH3PC4AMC7 463 aa15.12■□□□□ 0.01
LITAF-208ENST00000571627 IRAK2O43187 625 aa15.12■□□□□ 0.01
LITAF-208ENST00000571627 ACSL4O60488 711 aa15.12■□□□□ 0.01
LITAF-208ENST00000571627 ALDH1A2O94788 518 aa15.12■□□□□ 0.01
LITAF-208ENST00000571627 GFPT2O94808 682 aa15.12■□□□□ 0.01
LITAF-208ENST00000571627 TRUB2O95900 331 aaKnown RBP15.12■□□□□ 0.01
LITAF-208ENST00000571627 BCKDHBP21953 392 aa15.12■□□□□ 0.01
LITAF-208ENST00000571627 NNTQ13423 1086 aa15.12■□□□□ 0.01
LITAF-208ENST00000571627 NFKBIBQ15653 356 aa15.12■□□□□ 0.01
LITAF-208ENST00000571627 DCAF6Q58WW2 860 aa15.12■□□□□ 0.01
LITAF-208ENST00000571627 ZC3H12AQ5D1E8 599 aaKnown RBP15.12■□□□□ 0.01
LITAF-208ENST00000571627 OLFML1Q6UWY5 402 aa15.12■□□□□ 0.01
LITAF-208ENST00000571627 BEND5Q7L4P6 421 aa15.12■□□□□ 0.01
LITAF-208ENST00000571627 CACNA2D4Q7Z3S7 1137 aa15.12■□□□□ 0.01
LITAF-208ENST00000571627 ANKS1BQ7Z6G8 1248 aa15.12■□□□□ 0.01
LITAF-208ENST00000571627 DEFB106AQ8N104 65 aa15.12■□□□□ 0.01
LITAF-208ENST00000571627 PGBD3Q8N328 593 aa15.12■□□□□ 0.01
LITAF-208ENST00000571627 EPS8L1Q8TE68 723 aa15.12■□□□□ 0.01
LITAF-208ENST00000571627 IPO4Q8TEX9 1081 aaKnown RBP15.12■□□□□ 0.01
LITAF-208ENST00000571627 SLC20A1Q8WUM9 679 aa15.12■□□□□ 0.01
LITAF-208ENST00000571627 RLN3Q8WXF3 142 aa15.12■□□□□ 0.01
LITAF-208ENST00000571627 SORCS1Q8WY21 1168 aa15.12■□□□□ 0.01
LITAF-208ENST00000571627 DDX1Q92499 740 aaKnown RBP15.12■□□□□ 0.01
LITAF-208ENST00000571627 TMA16Q96EY4 203 aaKnown RBP15.12■□□□□ 0.01
LITAF-208ENST00000571627 MYEOVQ96EZ4 313 aa15.12■□□□□ 0.01
LITAF-208ENST00000571627 SLC39A13Q96H72 371 aa15.12■□□□□ 0.01
LITAF-208ENST00000571627 PRICKLE1Q96MT3 831 aaPredicted RBP15.12■□□□□ 0.01
LITAF-208ENST00000571627 NUCKS1Q9H1E3 243 aaKnown RBP15.12■□□□□ 0.01
LITAF-208ENST00000571627 RTN4Q9NQC3 1192 aaKnown RBP15.12■□□□□ 0.01
LITAF-208ENST00000571627 RAD54BQ9Y620 910 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms