RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 C10orf76Q5T2E6 689 aa13.19□□□□□ -0.3
TVP23B-204ENST00000571018 TAF3Q5VWG9 929 aa13.19□□□□□ -0.3
TVP23B-204ENST00000571018 HEATR6Q6AI08 1181 aaKnown RBP13.19□□□□□ -0.3
TVP23B-204ENST00000571018 WDR5BQ86VZ2 330 aa13.19□□□□□ -0.3
TVP23B-204ENST00000571018 ZNF677Q86XU0 584 aa13.19□□□□□ -0.3
TVP23B-204ENST00000571018 ZDHHC17Q8IUH5 632 aa13.19□□□□□ -0.3
TVP23B-204ENST00000571018 CCDC33Q8N5R6 958 aa13.19□□□□□ -0.3
TVP23B-204ENST00000571018 ALLCQ8N6M5 410 aa13.19□□□□□ -0.3
TVP23B-204ENST00000571018 IL17RCQ8NAC3 791 aa13.19□□□□□ -0.3
TVP23B-204ENST00000571018 IPO4Q8TEX9 1081 aaKnown RBP13.19□□□□□ -0.3
TVP23B-204ENST00000571018 SLC39A13Q96H72 371 aa13.19□□□□□ -0.3
TVP23B-204ENST00000571018 FCRL2Q96LA5 508 aaPredicted RBP13.19□□□□□ -0.3
TVP23B-204ENST00000571018 SLC2A13Q96QE2 648 aa13.19□□□□□ -0.3
TVP23B-204ENST00000571018 SPAG5Q96R06 1193 aa13.19□□□□□ -0.3
TVP23B-204ENST00000571018 IRX2Q9BZI1 471 aaPredicted RBP13.19□□□□□ -0.3
TVP23B-204ENST00000571018 EPC1Q9H2F5 836 aa13.19□□□□□ -0.3
TVP23B-204ENST00000571018 NOCTQ9UK39 431 aaKnown RBP13.19□□□□□ -0.3
TVP23B-204ENST00000571018 SLC27A6Q9Y2P4 619 aa13.19□□□□□ -0.3
TVP23B-204ENST00000571018 MYOFQ9NZM1 2061 aa13.19□□□□□ -0.3
TVP23B-204ENST00000571018 PRRT4C9JH25 899 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 IRAK2O43187 625 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 HRO43593 1189 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 ACSL4O60488 711 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 HSF2BPO75031 334 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 KLF8O95600 359 aaPredicted RBP13.18□□□□□ -0.3
TVP23B-204ENST00000571018 LSM8O95777 96 aaKnown RBP13.18□□□□□ -0.3
TVP23B-204ENST00000571018 TRUB2O95900 331 aaKnown RBP13.18□□□□□ -0.3
TVP23B-204ENST00000571018 IGLV3-25P01717 112 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 MMEP08473 750 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 GABRB2P47870 512 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 SLC11A2P49281 568 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 SLC6A3Q01959 620 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 EIF4EBP2Q13542 120 aaPredicted RBP13.18□□□□□ -0.3
TVP23B-204ENST00000571018 CRY1Q16526 586 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 DCAF6Q58WW2 860 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 OR6B2Q6IFH4 312 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 OLFML1Q6UWY5 402 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 TOGARAM2Q6ZUX3 1019 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 FAM183BPQ6ZVS7 135 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 SLC26A9Q7LBE3 791 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 TAC4Q86UU9 113 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 DEFB106AQ8N104 65 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 TXNDC5Q8NBS9 432 aaKnown RBP13.18□□□□□ -0.3
TVP23B-204ENST00000571018 ZNF397Q8NF99 534 aaPredicted RBP13.18□□□□□ -0.3
TVP23B-204ENST00000571018 ADAM32Q8TC27 787 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 DDI1Q8WTU0 396 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 TMA16Q96EY4 203 aaKnown RBP13.18□□□□□ -0.3
TVP23B-204ENST00000571018 HHIPQ96QV1 700 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 SLC2A11Q9BYW1 496 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 SYNCQ9H7C4 482 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 EBF1Q9UH73 591 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 HCN2Q9UL51 889 aa13.18□□□□□ -0.3
TVP23B-204ENST00000571018 SGK1O00141 431 aa13.17□□□□□ -0.3
TVP23B-204ENST00000571018 TEX33O43247 280 aa13.17□□□□□ -0.3
TVP23B-204ENST00000571018 TSPAN3O60637 253 aa13.17□□□□□ -0.3
TVP23B-204ENST00000571018 APBB3O95704 486 aa13.17□□□□□ -0.3
TVP23B-204ENST00000571018 HOXD9P28356 352 aaPredicted RBP13.17□□□□□ -0.3
TVP23B-204ENST00000571018 PXNP49023 591 aaPredicted RBP13.17□□□□□ -0.3
TVP23B-204ENST00000571018 DGKEP52429 567 aa13.17□□□□□ -0.3
TVP23B-204ENST00000571018 NOMO3P69849 1222 aa13.17□□□□□ -0.3
TVP23B-204ENST00000571018 PITX1P78337 314 aaPredicted RBP13.17□□□□□ -0.3
TVP23B-204ENST00000571018 CDR2Q01850 454 aa13.17□□□□□ -0.3
TVP23B-204ENST00000571018 FILIP1LQ4L180 1135 aa13.17□□□□□ -0.3
TVP23B-204ENST00000571018 FAM133BQ5BKY9 247 aaKnown RBP13.17□□□□□ -0.3
TVP23B-204ENST00000571018 EOGTQ5NDL2 527 aa13.17□□□□□ -0.3
TVP23B-204ENST00000571018 TRMT11Q7Z4G4 463 aaKnown RBP13.17□□□□□ -0.3
TVP23B-204ENST00000571018 ERICH1Q86X53 443 aa13.17□□□□□ -0.3
TVP23B-204ENST00000571018 ZNF513Q8N8E2 541 aaPredicted RBP13.17□□□□□ -0.3
TVP23B-204ENST00000571018 SLC20A1Q8WUM9 679 aa13.17□□□□□ -0.3
TVP23B-204ENST00000571018 C18orf8Q96DM3 657 aa13.17□□□□□ -0.3
TVP23B-204ENST00000571018 CBX8Q9HC52 389 aa13.17□□□□□ -0.3
TVP23B-204ENST00000571018 CLEC4EQ9ULY5 219 aa13.17□□□□□ -0.3
TVP23B-204ENST00000571018 GOLGA6L7A0A1B0GV03 622 aa13.16□□□□□ -0.3
TVP23B-204ENST00000571018 AXIN1O15169 862 aa13.16□□□□□ -0.3
TVP23B-204ENST00000571018 ADAM23O75077 832 aa13.16□□□□□ -0.3
TVP23B-204ENST00000571018 GRAP2O75791 330 aa13.16□□□□□ -0.3
TVP23B-204ENST00000571018 CAVIN2O95810 425 aa13.16□□□□□ -0.3
TVP23B-204ENST00000571018 CYP1A1P04798 512 aaPredicted RBP13.16□□□□□ -0.3
TVP23B-204ENST00000571018 HNRNPLP14866 589 aaKnown RBP eCLIP13.16□□□□□ -0.3
TVP23B-204ENST00000571018 CHRNB2P17787 502 aa13.16□□□□□ -0.3
TVP23B-204ENST00000571018 SLC6A4P31645 630 aa13.16□□□□□ -0.3
TVP23B-204ENST00000571018 NOS2P35228 1153 aa13.16□□□□□ -0.3
TVP23B-204ENST00000571018 SCNN1AP37088 669 aa13.16□□□□□ -0.3
TVP23B-204ENST00000571018 CDK17Q00537 523 aa13.16□□□□□ -0.3
TVP23B-204ENST00000571018 FMO1Q01740 532 aa13.16□□□□□ -0.3
TVP23B-204ENST00000571018 SRSF5Q13243 272 aaKnown RBP13.16□□□□□ -0.3
TVP23B-204ENST00000571018 GEN1Q17RS7 908 aa13.16□□□□□ -0.3
TVP23B-204ENST00000571018 ZSCAN23Q3MJ62 389 aa13.16□□□□□ -0.3
TVP23B-204ENST00000571018 MPP7Q5T2T1 576 aa13.16□□□□□ -0.3
TVP23B-204ENST00000571018 PIK3R6Q5UE93 754 aa13.16□□□□□ -0.3
TVP23B-204ENST00000571018 NADSYN1Q6IA69 706 aa13.16□□□□□ -0.3
TVP23B-204ENST00000571018 RASSF3Q86WH2 238 aa13.16□□□□□ -0.3
TVP23B-204ENST00000571018 MSANTD4Q8NCY6 345 aa13.16□□□□□ -0.3
TVP23B-204ENST00000571018 TSTD1Q8NFU3 115 aa13.16□□□□□ -0.3
TVP23B-204ENST00000571018 DDX50Q9BQ39 737 aaKnown RBP13.16□□□□□ -0.3
TVP23B-204ENST00000571018 ZDHHC4Q9NPG8 344 aa13.16□□□□□ -0.3
TVP23B-204ENST00000571018 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.16□□□□□ -0.3
TVP23B-204ENST00000571018 SMG5Q9UPR3 1016 aaKnown RBP13.16□□□□□ -0.3
TVP23B-204ENST00000571018 PIEZO1Q92508 2521 aa13.16□□□□□ -0.3
TVP23B-204ENST00000571018 A0A1B0GTH6 734 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms