RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 TEKT2Q9UIF3 430 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 ANKRD6Q9Y2G4 727 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 APOA1P02647 267 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 ITGB5P18084 799 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 UGCGQ16739 394 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 DEFB106AQ8N104 65 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 PAPOLBQ9NRJ5 636 aaKnown RBP15.75■□□□□ 0.11
CIITA-204ENST00000570546 FAM237BA0A1B0GVD1 139 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 GPR182O15218 404 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 PAX7P23759 505 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 IRGCQ6NXR0 463 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 KAT2BQ92831 832 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 THUMPD3Q9BV44 507 aaKnown RBP15.74■□□□□ 0.11
CIITA-204ENST00000570546 SCN3BQ9NY72 215 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 WWOXQ9NZC7 414 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 EIF3LQ9Y262 564 aaKnown RBP15.74■□□□□ 0.11
CIITA-204ENST00000570546 HEATR9A2RTY3 570 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 TPP1O14773 563 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 HNRNPRO43390 633 aaKnown RBP15.74■□□□□ 0.11
CIITA-204ENST00000570546 VPS26AO75436 327 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 THP07101 528 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 TSHRP16473 764 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 AKAP5P24588 427 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 CDK7P50613 346 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 NEK2P51955 445 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 PRKAA2P54646 552 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 JAM2P57087 298 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 NT5DC4Q86YG4 428 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 MFSD14AQ96MC6 490 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 NT5MQ9NPB1 228 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 PRG3Q9Y2Y8 225 aaPredicted RBP15.74■□□□□ 0.11
CIITA-204ENST00000570546 DPYSL4O14531 572 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 ZSCAN9O15535 394 aaPredicted RBP15.74■□□□□ 0.11
CIITA-204ENST00000570546 CCDC130P13994 396 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 CD151P48509 253 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 ZNF143P52747 638 aaPredicted RBP15.74■□□□□ 0.11
CIITA-204ENST00000570546 SLC27A1Q6PCB7 646 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 C12orf56Q8IXR9 622 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 EDEM1Q92611 657 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 FAM136AQ96C01 138 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 FHDC1Q9C0D6 1143 aaPredicted RBP15.74■□□□□ 0.11
CIITA-204ENST00000570546 BRD8Q9H0E9 1235 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 GPRC5DQ9NZD1 345 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 APPL1Q9UKG1 709 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 PCDHA11Q9Y5I1 949 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 DDHD2O94830 711 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 ACAT1P24752 427 aaKnown RBP15.74■□□□□ 0.11
CIITA-204ENST00000570546 NAIF1Q69YI7 327 aaPredicted RBP15.74■□□□□ 0.11
CIITA-204ENST00000570546 C16orf46Q6P387 395 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 PTAR1Q7Z6K3 402 aaPredicted RBP15.74■□□□□ 0.11
CIITA-204ENST00000570546 MIB1Q86YT6 1006 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 LRRC57Q8N9N7 239 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 GLIS2Q9BZE0 524 aaPredicted RBP15.74■□□□□ 0.11
CIITA-204ENST00000570546 NEUROG2Q9H2A3 272 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 TRHDEQ9UKU6 1024 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 FAM32AQ9Y421 112 aaKnown RBP15.74■□□□□ 0.11
CIITA-204ENST00000570546 AP4S1Q9Y587 144 aa15.74■□□□□ 0.11
CIITA-204ENST00000570546 M0R3G1 203 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 THPOP40225 353 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 RPL7AP62424 266 aaKnown RBP15.73■□□□□ 0.11
CIITA-204ENST00000570546 NPY5RQ15761 445 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 PLEKHH3Q7Z736 793 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 SLC2A14Q8TDB8 520 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 PRPF18Q99633 342 aaKnown RBP15.73■□□□□ 0.11
CIITA-204ENST00000570546 SYT15Q9BQS2 421 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 TBC1D10AQ9BXI6 508 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 SEPT3Q9UH03 358 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.73■□□□□ 0.11
CIITA-204ENST00000570546 F5H5T6 163 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 AGPSO00116 658 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 FAM58BPP0C7Q3 252 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 UBA1P22314 1058 aaKnown RBP15.73■□□□□ 0.11
CIITA-204ENST00000570546 DIS3LQ8TF46 1054 aaKnown RBP15.73■□□□□ 0.11
CIITA-204ENST00000570546 KREMEN1Q96MU8 473 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 FOPNLQ96NB1 174 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 NRDE2Q9H7Z3 1164 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 PDGFCQ9NRA1 345 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 ZMYM2Q9UBW7 1377 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 GLP2RO95838 553 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 TRPC1P48995 793 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 GTF2A2P52657 109 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 PLIN5Q00G26 463 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 ZACNQ401N2 412 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 ZBTB49Q6ZSB9 765 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 FAM183BPQ6ZVS7 135 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 ZNF398Q8TD17 642 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 ZNF184Q99676 751 aaPredicted RBP15.73■□□□□ 0.11
CIITA-204ENST00000570546 ZNF556Q9HAH1 456 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 PRDM5Q9NQX1 630 aaPredicted RBP15.73■□□□□ 0.11
CIITA-204ENST00000570546 RBM22Q9NW64 420 aaKnown RBP eCLIP15.73■□□□□ 0.11
CIITA-204ENST00000570546 CRLS1Q9UJA2 301 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 COG5Q9UP83 839 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 NFASCO94856 1347 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 EVPLLA8MZ36 301 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 DCXO43602 365 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 DDX5P17844 614 aaKnown RBP15.73■□□□□ 0.11
CIITA-204ENST00000570546 PAN2Q504Q3 1202 aaKnown RBP15.73■□□□□ 0.11
CIITA-204ENST00000570546 CACHD1Q5VU97 1274 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 TATDN1Q6P1N9 297 aa15.73■□□□□ 0.11
CIITA-204ENST00000570546 SEMA4DQ92854 862 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms