RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 WDR49Q8IV35 697 aa10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 RASSF8Q8NHQ8 419 aa10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 DNAJC19Q96DA6 116 aa10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 TMEM245Q9H330 911 aa10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 FBXO44Q9H4M3 255 aa10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 SGK2Q9HBY8 427 aa10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 KRT82Q9NSB4 513 aa10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 NXF1Q9UBU9 619 aaKnown RBP10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 SSUH2Q9Y2M2 353 aa10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 PCDHB13Q9Y5F0 798 aa10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 KIF26BQ2KJY2 2108 aa10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 WNT9AO14904 365 aa10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 YKT6O15498 198 aa10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 CYP26A1O43174 497 aa10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 TIMM44O43615 452 aa10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 DNTTP04053 509 aa10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 NTRK1P04629 796 aa10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 MPOP05164 745 aa10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 RARGP13631 454 aa10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 GAP43P17677 238 aa10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 ACP1P24666 158 aa10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 CHKAP35790 457 aa10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 MAP3K7CLP57077 242 aa10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 ARID5AQ03989 594 aa10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 ZBTB16Q05516 673 aa10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 MCTP1Q6DN14 999 aa10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 GPRIN1Q7Z2K8 1008 aa10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 CYB5D2Q8WUJ1 264 aa10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 KCNE4Q8WWG9 221 aa10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 XYLT2Q9H1B5 865 aa10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 CSNK1G1Q9HCP0 422 aa10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 PRSS16Q9NQE7 514 aa10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 ADAMTS1Q9UHI8 967 aa10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 DACH1Q9UI36 760 aa10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 SCML2Q9UQR0 700 aa10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 ZNF510Q9Y2H8 683 aa10.96□□□□□ -0.65
CTDNEP1-202ENST00000570380 FLNCQ14315 2725 aa10.96□□□□□ -0.66
CTDNEP1-202ENST00000570380 COL27A1Q8IZC6 1860 aaPredicted RBP10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 NBPF19A0A087WUL8 3843 aa10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 A0A1W2PQH9 124 aa10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 A0A1W2PR77 199 aa10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 FAM47DPA6NHR8 397 aa10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 TERTO14746 1132 aaKnown RBP10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 KIAA0391O15091 583 aaKnown RBP10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 DXOO77932 396 aaKnown RBP10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 DLATP10515 647 aaKnown RBP10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 CCDC130P13994 396 aa10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 CD38P28907 300 aa10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 ARRB1P49407 418 aaPredicted RBP10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 MYL6P60660 151 aa10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 NFATC3Q12968 1075 aa10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 KCNJ12Q14500 433 aa10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 PROX2Q3B8N5 592 aa10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 TTC31Q49AM3 519 aaPredicted RBP10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 FNDC3BQ53EP0 1204 aaKnown RBP10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 C10orf120Q5SQS8 335 aa10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 SKA1Q96BD8 255 aa10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 SLC2A11Q9BYW1 496 aa10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 DPH1Q9BZG8 443 aa10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 SMYD3Q9H7B4 428 aa10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 GDF3Q9NR23 364 aa10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 OLFML3Q9NRN5 406 aa10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 AASDHPPTQ9NRN7 309 aa10.95□□□□□ -0.66
CTDNEP1-202ENST00000570380 C10orf142B7Z368 130 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 HHLA1C9JL84 531 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 K7ENP7 123 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 STAU1O95793 577 aaKnown RBP10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 CYBBP04839 570 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 HMBSP08397 361 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 TNNI1P19237 187 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 CORO1AP31146 461 aaKnown RBP10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 LONP1P36776 959 aaKnown RBP10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 RXRGP48443 463 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 GALCP54803 685 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 ERVPABLB-1P60509 514 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 GABREP78334 506 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 E2F1Q01094 437 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 ALCAMQ13740 583 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 INO80CQ6PI98 192 aaPredicted RBP10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 NCEH1Q6PIU2 408 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 ACOT1Q86TX2 421 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 LSMEM2Q8N112 164 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 RDH13Q8NBN7 331 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 SLC2A14Q8TDB8 520 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 DDI1Q8WTU0 396 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 ZNF516Q92618 1163 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 TNIP3Q96KP6 325 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 FAM117AQ9C073 453 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 SDCBP2Q9H190 292 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 FBRSQ9HAH7 460 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 ASCL3Q9NQ33 180 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 HSPBP1Q9NZL4 362 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 SERGEFQ9UGK8 458 aa10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 AGO1Q9UL18 857 aaKnown RBP10.94□□□□□ -0.66
CTDNEP1-202ENST00000570380 TLR4O00206 839 aa10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 HLA-FP30511 346 aa10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 LSSP48449 732 aa10.93□□□□□ -0.66
CTDNEP1-202ENST00000570380 NXPH1P58417 271 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms