RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 SHC3Q92529 594 aa17.81■□□□□ 0.44
MAP1LC3B-208ENST00000570189 GOLGA1Q92805 767 aa17.81■□□□□ 0.44
MAP1LC3B-208ENST00000570189 BHMTQ93088 406 aa17.81■□□□□ 0.44
MAP1LC3B-208ENST00000570189 THAP9Q9H5L6 903 aa17.81■□□□□ 0.44
MAP1LC3B-208ENST00000570189 UBE2TQ9NPD8 197 aaPredicted RBP17.81■□□□□ 0.44
MAP1LC3B-208ENST00000570189 ELOVL2Q9NXB9 296 aa17.81■□□□□ 0.44
MAP1LC3B-208ENST00000570189 APEX2Q9UBZ4 518 aa17.81■□□□□ 0.44
MAP1LC3B-208ENST00000570189 STON1Q9Y6Q2 735 aa17.81■□□□□ 0.44
MAP1LC3B-208ENST00000570189 CACNA1EQ15878 2313 aa17.8■□□□□ 0.44
MAP1LC3B-208ENST00000570189 FYNP06241 537 aa17.8■□□□□ 0.44
MAP1LC3B-208ENST00000570189 ADRB1P08588 477 aa17.8■□□□□ 0.44
MAP1LC3B-208ENST00000570189 ERCC5P28715 1186 aaPredicted RBP17.8■□□□□ 0.44
MAP1LC3B-208ENST00000570189 DHPSP49366 369 aaPredicted RBP17.8■□□□□ 0.44
MAP1LC3B-208ENST00000570189 CT47A1Q5JQC4 288 aaPredicted RBP17.8■□□□□ 0.44
MAP1LC3B-208ENST00000570189 IL31Q6EBC2 164 aa17.8■□□□□ 0.44
MAP1LC3B-208ENST00000570189 TCEAL6Q6IPX3 200 aa17.8■□□□□ 0.44
MAP1LC3B-208ENST00000570189 PGBD3Q8N328 593 aa17.8■□□□□ 0.44
MAP1LC3B-208ENST00000570189 WFIKKN2Q8TEU8 576 aa17.8■□□□□ 0.44
MAP1LC3B-208ENST00000570189 CLEC4CQ8WTT0 213 aa17.8■□□□□ 0.44
MAP1LC3B-208ENST00000570189 TCEAL3Q969E4 200 aa17.8■□□□□ 0.44
MAP1LC3B-208ENST00000570189 MRGPRX1Q96LB2 322 aa17.8■□□□□ 0.44
MAP1LC3B-208ENST00000570189 LSM14BQ9BX40 385 aaKnown RBP17.8■□□□□ 0.44
MAP1LC3B-208ENST00000570189 SMOC1Q9H4F8 434 aa17.8■□□□□ 0.44
MAP1LC3B-208ENST00000570189 CACNA2D2Q9NY47 1150 aa17.8■□□□□ 0.44
MAP1LC3B-208ENST00000570189 CLEC4EQ9ULY5 219 aa17.8■□□□□ 0.44
MAP1LC3B-208ENST00000570189 PCDH15Q96QU1 1955 aa17.8■□□□□ 0.44
MAP1LC3B-208ENST00000570189 IGHV1OR15-9A0A0B4J2B8 117 aa17.79■□□□□ 0.44
MAP1LC3B-208ENST00000570189 BECN2A8MW95 431 aa17.79■□□□□ 0.44
MAP1LC3B-208ENST00000570189 KHNYNO15037 678 aaKnown RBP17.79■□□□□ 0.44
MAP1LC3B-208ENST00000570189 MAP3K13O43283 966 aa17.79■□□□□ 0.44
MAP1LC3B-208ENST00000570189 MSI1O43347 362 aaKnown RBP17.79■□□□□ 0.44
MAP1LC3B-208ENST00000570189 KRT5P13647 590 aa17.79■□□□□ 0.44
MAP1LC3B-208ENST00000570189 STARD3Q14849 445 aa17.79■□□□□ 0.44
MAP1LC3B-208ENST00000570189 EXOC3L4Q17RC7 722 aa17.79■□□□□ 0.44
MAP1LC3B-208ENST00000570189 PPM1JQ5JR12 505 aa17.79■□□□□ 0.44
MAP1LC3B-208ENST00000570189 TMEM215Q68D42 235 aa17.79■□□□□ 0.44
MAP1LC3B-208ENST00000570189 SLC23A3Q6PIS1 610 aa17.79■□□□□ 0.44
MAP1LC3B-208ENST00000570189 RABEPKQ7Z6M1 372 aa17.79■□□□□ 0.44
MAP1LC3B-208ENST00000570189 FRMD1Q8N878 549 aa17.79■□□□□ 0.44
MAP1LC3B-208ENST00000570189 TMA16Q96EY4 203 aaKnown RBP17.79■□□□□ 0.44
MAP1LC3B-208ENST00000570189 SLC39A13Q96H72 371 aa17.79■□□□□ 0.44
MAP1LC3B-208ENST00000570189 SERPINB11Q96P15 392 aa17.79■□□□□ 0.44
MAP1LC3B-208ENST00000570189 EDEM2Q9BV94 578 aa17.79■□□□□ 0.44
MAP1LC3B-208ENST00000570189 PILRBQ9UKJ0 227 aa17.79■□□□□ 0.44
MAP1LC3B-208ENST00000570189 PCDHGC3Q9UN70 934 aa17.79■□□□□ 0.44
MAP1LC3B-208ENST00000570189 TLR6Q9Y2C9 796 aa17.79■□□□□ 0.44
MAP1LC3B-208ENST00000570189 NFE2L3Q9Y4A8 694 aa17.79■□□□□ 0.44
MAP1LC3B-208ENST00000570189 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 CALCAP01258 141 aa17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 IGLV3-19P01714 112 aa17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 IGLV3-25P01717 112 aa17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 NCAM1P13591 858 aa17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 SLC9A1P19634 815 aa17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 PON1P27169 355 aa17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 HLA-FP30511 346 aa17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 GNA15P30679 374 aa17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 IL12RB1P42701 662 aa17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 WASP42768 502 aa17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 PTGER3P43115 390 aa17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 SLC11A2P49281 568 aa17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 TBX4P57082 545 aa17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 ZNF234Q14588 700 aa17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 MAN2A1Q16706 1144 aa17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 FAM133BQ5BKY9 247 aaKnown RBP17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 PIK3R6Q5UE93 754 aa17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 LYSMD4Q5XG99 296 aa17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 FAM114A1Q8IWE2 563 aa17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 TMEFF1Q8IYR6 380 aa17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 DQX1Q8TE96 717 aaKnown RBP17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 FCRL2Q96LA5 508 aaPredicted RBP17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 USP36Q9P275 1121 aaKnown RBP17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 CYTH4Q9UIA0 394 aa17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 ASCC3Q8N3C0 2202 aaKnown RBP17.78■□□□□ 0.44
MAP1LC3B-208ENST00000570189 WASH3PC4AMC7 463 aa17.77■□□□□ 0.44
MAP1LC3B-208ENST00000570189 PAPSS1O43252 624 aaPredicted RBP17.77■□□□□ 0.44
MAP1LC3B-208ENST00000570189 ACSL4O60488 711 aa17.77■□□□□ 0.44
MAP1LC3B-208ENST00000570189 LETM1O95202 739 aaPredicted RBP17.77■□□□□ 0.44
MAP1LC3B-208ENST00000570189 GLI1P08151 1106 aa17.77■□□□□ 0.44
MAP1LC3B-208ENST00000570189 RPL6Q02878 288 aaKnown RBP17.77■□□□□ 0.44
MAP1LC3B-208ENST00000570189 LMAN2Q12907 356 aa17.77■□□□□ 0.44
MAP1LC3B-208ENST00000570189 EIF4EBP2Q13542 120 aaPredicted RBP17.77■□□□□ 0.44
MAP1LC3B-208ENST00000570189 FUT11Q495W5 492 aa17.77■□□□□ 0.44
MAP1LC3B-208ENST00000570189 DENND1BQ6P3S1 775 aa17.77■□□□□ 0.44
MAP1LC3B-208ENST00000570189 SCUBE3Q8IX30 993 aa17.77■□□□□ 0.44
MAP1LC3B-208ENST00000570189 AHI1Q8N157 1196 aa17.77■□□□□ 0.44
MAP1LC3B-208ENST00000570189 CEP76Q8TAP6 659 aa17.77■□□□□ 0.44
MAP1LC3B-208ENST00000570189 ZNF419Q96HQ0 510 aaPredicted RBP17.77■□□□□ 0.44
MAP1LC3B-208ENST00000570189 DDX50Q9BQ39 737 aaKnown RBP17.77■□□□□ 0.44
MAP1LC3B-208ENST00000570189 CRACR2AQ9BSW2 395 aa17.77■□□□□ 0.44
MAP1LC3B-208ENST00000570189 LHX5Q9H2C1 402 aa17.77■□□□□ 0.44
MAP1LC3B-208ENST00000570189 POPDC2Q9HBU9 364 aa17.77■□□□□ 0.44
MAP1LC3B-208ENST00000570189 SIX2Q9NPC8 291 aa17.77■□□□□ 0.44
MAP1LC3B-208ENST00000570189 ASNSD1Q9NWL6 643 aa17.77■□□□□ 0.44
MAP1LC3B-208ENST00000570189 DACH1Q9UI36 760 aa17.77■□□□□ 0.44
MAP1LC3B-208ENST00000570189 RAD54BQ9Y620 910 aa17.77■□□□□ 0.44
MAP1LC3B-208ENST00000570189 NYNRINQ9P2P1 1898 aaKnown RBP17.76■□□□□ 0.43
MAP1LC3B-208ENST00000570189 PIK3R2O00459 728 aa17.76■□□□□ 0.43
MAP1LC3B-208ENST00000570189 CDX4O14627 284 aaPredicted RBP17.76■□□□□ 0.43
MAP1LC3B-208ENST00000570189 SLC6A4P31645 630 aa17.76■□□□□ 0.43
MAP1LC3B-208ENST00000570189 PDCLQ13371 301 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms