RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 SYCP1Q15431 976 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 GEN1Q17RS7 908 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 KLHL40Q2TBA0 621 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 MPPE1Q53F39 396 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 FAM133BQ5BKY9 247 aaKnown RBP13.56□□□□□ -0.24
CNOT1-220ENST00000569916 EOGTQ5NDL2 527 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 TAF3Q5VWG9 929 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 LAIR1Q6GTX8 287 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 NADSYN1Q6IA69 706 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 ANO7Q6IWH7 933 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 OLFML1Q6UWY5 402 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 TRMT11Q7Z4G4 463 aaKnown RBP13.56□□□□□ -0.24
CNOT1-220ENST00000569916 DHX40Q8IX18 779 aaKnown RBP13.56□□□□□ -0.24
CNOT1-220ENST00000569916 MDGA1Q8NFP4 955 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 DDI1Q8WTU0 396 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 AZIN2Q96A70 460 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 SLC2A13Q96QE2 648 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 ERGIC2Q96RQ1 377 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 ACOX2Q99424 681 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 HINFPQ9BQA5 517 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 NAT10Q9H0A0 1025 aaKnown RBP13.56□□□□□ -0.24
CNOT1-220ENST00000569916 NLRC4Q9NPP4 1024 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 RAB23Q9ULC3 237 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 DAAM1Q9Y4D1 1078 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 CEP83Q9Y592 693 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 FRYLO94915 3013 aa13.56□□□□□ -0.24
CNOT1-220ENST00000569916 GVINP1Q7Z2Y8 2422 aa13.55□□□□□ -0.24
CNOT1-220ENST00000569916 RIF1Q5UIP0 2472 aaKnown RBP13.55□□□□□ -0.24
CNOT1-220ENST00000569916 GOLGA6L7A0A1B0GV03 622 aa13.55□□□□□ -0.24
CNOT1-220ENST00000569916 HSF2BPO75031 334 aa13.55□□□□□ -0.24
CNOT1-220ENST00000569916 TRUB2O95900 331 aaKnown RBP13.55□□□□□ -0.24
CNOT1-220ENST00000569916 GLI1P08151 1106 aa13.55□□□□□ -0.24
CNOT1-220ENST00000569916 MMEP08473 750 aa13.55□□□□□ -0.24
CNOT1-220ENST00000569916 CDK11BP21127 795 aaKnown RBP13.55□□□□□ -0.24
CNOT1-220ENST00000569916 SLC6A4P31645 630 aa13.55□□□□□ -0.24
CNOT1-220ENST00000569916 SLC11A2P49281 568 aa13.55□□□□□ -0.24
CNOT1-220ENST00000569916 UBXN1Q04323 297 aa13.55□□□□□ -0.24
CNOT1-220ENST00000569916 EIF4EBP2Q13542 120 aaPredicted RBP13.55□□□□□ -0.24
CNOT1-220ENST00000569916 EFHC1Q5JVL4 640 aa13.55□□□□□ -0.24
CNOT1-220ENST00000569916 RNF43Q68DV7 783 aa13.55□□□□□ -0.24
CNOT1-220ENST00000569916 OR6B2Q6IFH4 312 aa13.55□□□□□ -0.24
CNOT1-220ENST00000569916 RFWD3Q6PCD5 774 aa13.55□□□□□ -0.24
CNOT1-220ENST00000569916 CEP68Q76N32 757 aa13.55□□□□□ -0.24
CNOT1-220ENST00000569916 SLC26A9Q7LBE3 791 aa13.55□□□□□ -0.24
CNOT1-220ENST00000569916 DEFB106AQ8N104 65 aa13.55□□□□□ -0.24
CNOT1-220ENST00000569916 FAM160A2Q8N612 972 aaPredicted RBP13.55□□□□□ -0.24
CNOT1-220ENST00000569916 TMEM35BQ8NCS4 154 aa13.55□□□□□ -0.24
CNOT1-220ENST00000569916 IPO4Q8TEX9 1081 aaKnown RBP13.55□□□□□ -0.24
CNOT1-220ENST00000569916 PRICKLE1Q96MT3 831 aaPredicted RBP13.55□□□□□ -0.24
CNOT1-220ENST00000569916 SLC2A11Q9BYW1 496 aa13.55□□□□□ -0.24
CNOT1-220ENST00000569916 TPSD1Q9BZJ3 242 aa13.55□□□□□ -0.24
CNOT1-220ENST00000569916 PDCL3Q9H2J4 239 aa13.55□□□□□ -0.24
CNOT1-220ENST00000569916 CD248Q9HCU0 757 aa13.55□□□□□ -0.24
CNOT1-220ENST00000569916 POLMQ9NP87 494 aaPredicted RBP13.55□□□□□ -0.24
CNOT1-220ENST00000569916 NOCTQ9UK39 431 aaKnown RBP13.55□□□□□ -0.24
CNOT1-220ENST00000569916 GMEB2Q9UKD1 530 aa13.55□□□□□ -0.24
CNOT1-220ENST00000569916 CKAP5Q14008 2032 aa13.55□□□□□ -0.24
CNOT1-220ENST00000569916 TNRC6BQ9UPQ9 1833 aaKnown RBP13.55□□□□□ -0.24
CNOT1-220ENST00000569916 NYNRINQ9P2P1 1898 aaKnown RBP13.55□□□□□ -0.24
CNOT1-220ENST00000569916 GPR179Q6PRD1 2367 aa13.54□□□□□ -0.24
CNOT1-220ENST00000569916 RALGAPA1Q6GYQ0 2036 aa13.54□□□□□ -0.24
CNOT1-220ENST00000569916 DAB1O75553 588 aa13.54□□□□□ -0.24
CNOT1-220ENST00000569916 GRAP2O75791 330 aa13.54□□□□□ -0.24
CNOT1-220ENST00000569916 GFPT2O94808 682 aa13.54□□□□□ -0.24
CNOT1-220ENST00000569916 LSM8O95777 96 aaKnown RBP13.54□□□□□ -0.24
CNOT1-220ENST00000569916 HOXB2P14652 356 aa13.54□□□□□ -0.24
CNOT1-220ENST00000569916 NTSR1P30989 418 aa13.54□□□□□ -0.24
CNOT1-220ENST00000569916 SOX5P35711 763 aa13.54□□□□□ -0.24
CNOT1-220ENST00000569916 WASP42768 502 aa13.54□□□□□ -0.24
CNOT1-220ENST00000569916 SNX16P57768 344 aa13.54□□□□□ -0.24
CNOT1-220ENST00000569916 NOMO3P69849 1222 aa13.54□□□□□ -0.24
CNOT1-220ENST00000569916 SLC6A3Q01959 620 aa13.54□□□□□ -0.24
CNOT1-220ENST00000569916 DCAF6Q58WW2 860 aa13.54□□□□□ -0.24
CNOT1-220ENST00000569916 PIK3R6Q5UE93 754 aa13.54□□□□□ -0.24
CNOT1-220ENST00000569916 ANKS1BQ7Z6G8 1248 aa13.54□□□□□ -0.24
CNOT1-220ENST00000569916 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.54□□□□□ -0.24
CNOT1-220ENST00000569916 ZNF397Q8NF99 534 aaPredicted RBP13.54□□□□□ -0.24
CNOT1-220ENST00000569916 NEK11Q8NG66 645 aa13.54□□□□□ -0.24
CNOT1-220ENST00000569916 SLC20A1Q8WUM9 679 aa13.54□□□□□ -0.24
CNOT1-220ENST00000569916 TMA16Q96EY4 203 aaKnown RBP13.54□□□□□ -0.24
CNOT1-220ENST00000569916 MYEOVQ96EZ4 313 aa13.54□□□□□ -0.24
CNOT1-220ENST00000569916 GABRG3Q99928 467 aa13.54□□□□□ -0.24
CNOT1-220ENST00000569916 IRX2Q9BZI1 471 aaPredicted RBP13.54□□□□□ -0.24
CNOT1-220ENST00000569916 SYNCQ9H7C4 482 aa13.54□□□□□ -0.24
CNOT1-220ENST00000569916 XPO7Q9UIA9 1087 aaKnown RBP13.54□□□□□ -0.24
CNOT1-220ENST00000569916 CFAP54Q96N23 3096 aa13.54□□□□□ -0.24
CNOT1-220ENST00000569916 CEP192Q8TEP8 1941 aa13.53□□□□□ -0.24
CNOT1-220ENST00000569916 A0A1W2PQF6 199 aa13.53□□□□□ -0.24
CNOT1-220ENST00000569916 TCRBV21S2A2A0A5A6 115 aa13.53□□□□□ -0.24
CNOT1-220ENST00000569916 FAM170AA1A519 330 aa13.53□□□□□ -0.24
CNOT1-220ENST00000569916 SYCE3A1L190 88 aa13.53□□□□□ -0.24
CNOT1-220ENST00000569916 ALDH1A2O94788 518 aa13.53□□□□□ -0.24
CNOT1-220ENST00000569916 MOCS2O96007 188 aaPredicted RBP13.53□□□□□ -0.24
CNOT1-220ENST00000569916 APOEP02649 317 aa13.53□□□□□ -0.24
CNOT1-220ENST00000569916 HLA-FP30511 346 aa13.53□□□□□ -0.24
CNOT1-220ENST00000569916 GABRB2P47870 512 aa13.53□□□□□ -0.24
CNOT1-220ENST00000569916 ZNF165P49910 485 aa13.53□□□□□ -0.24
CNOT1-220ENST00000569916 CDR2Q01850 454 aa13.53□□□□□ -0.24
CNOT1-220ENST00000569916 ZC3H12AQ5D1E8 599 aaKnown RBP13.53□□□□□ -0.24
CNOT1-220ENST00000569916 MPP7Q5T2T1 576 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms