RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 FAM47DPA6NHR8 397 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 SMIM23A6NLE4 172 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 MEIS3P2A8K0S8 358 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 RASA4BC9J798 803 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 HHLA1C9JL84 531 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 H3BRJ5 948 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 MYO1CO00159 1063 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 KCNN4O15554 427 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 RASA4O43374 803 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 TYROBPO43914 113 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 BEST1O76090 585 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 DXOO77932 396 aaKnown RBP5.57□□□□□ -1.52
SF3B3-213ENST00000569687 TMEM63AO94886 807 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 ASMTLO95671 621 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 EOMESO95936 686 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 PGK1P00558 417 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 GNRH1P01148 92 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 C1QAP02745 245 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 ASGR1P07306 291 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 FAM200BP0CF97 657 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 GHRP10912 638 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 COL6A1P12109 1028 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 MLNP12872 115 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 CREB1P16220 341 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 ATP2A2P16615 1042 aaKnown RBP5.57□□□□□ -1.52
SF3B3-213ENST00000569687 TFE3P19532 575 aaPredicted RBP5.57□□□□□ -1.52
SF3B3-213ENST00000569687 TYMPP19971 482 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 IGFBP6P24592 240 aaPredicted RBP5.57□□□□□ -1.52
SF3B3-213ENST00000569687 HOXD10P28358 340 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 RBL1P28749 1068 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 FDFT1P37268 417 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 THPOP40225 353 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 MAGEA3P43357 314 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 GLUD2P49448 558 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 CLCNKBP51801 687 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 WDR4P57081 412 aaKnown RBP5.57□□□□□ -1.52
SF3B3-213ENST00000569687 DAOAP59103 153 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 ADIGQ0VDE8 80 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 TRIM32Q13049 653 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 SEMA3BQ13214 749 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 TUSC3Q13454 348 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 EIF4EBP2Q13542 120 aaPredicted RBP5.57□□□□□ -1.52
SF3B3-213ENST00000569687 SEMA5AQ13591 1074 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 LPIN1Q14693 890 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 FASTKD3Q14CZ7 662 aaKnown RBP5.57□□□□□ -1.52
SF3B3-213ENST00000569687 PDK1Q15118 436 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 CDO1Q16878 200 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 SKIDA1Q1XH10 827 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 TIGD5Q53EQ6 642 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 INTS6LQ5JSJ4 861 aaKnown RBP5.57□□□□□ -1.52
SF3B3-213ENST00000569687 VARS2Q5ST30 1063 aaKnown RBP5.57□□□□□ -1.52
SF3B3-213ENST00000569687 OTUD1Q5VV17 481 aaPredicted RBP5.57□□□□□ -1.52
SF3B3-213ENST00000569687 KCNT2Q6UVM3 1135 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 NPNTQ6UXI9 565 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 DSTYKQ6XUX3 929 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 MAMSTRQ6ZN01 415 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 ARHGEF18Q6ZSZ5 1173 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 PDZD4Q76G19 769 aaPredicted RBP5.57□□□□□ -1.52
SF3B3-213ENST00000569687 CAND1Q86VP6 1230 aaKnown RBP5.57□□□□□ -1.52
SF3B3-213ENST00000569687 METTL23Q86XA0 190 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 CCDC13Q8IYE1 715 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 CACNA2D3Q8IZS8 1091 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 FAM160A2Q8N612 972 aaPredicted RBP5.57□□□□□ -1.52
SF3B3-213ENST00000569687 OTUD6BQ8N6M0 293 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 CCDC185Q8N715 623 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 ANKS4BQ8N8V4 417 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 SLC43A3Q8NBI5 491 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 CCDC197Q8NCU1 140 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 FBXO36Q8NEA4 188 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 ZMIZ2Q8NF64 920 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 CLEC4CQ8WTT0 213 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 MZB1Q8WU39 189 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 APBB2Q92870 758 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 ALKBH8Q96BT7 664 aaKnown RBP5.57□□□□□ -1.52
SF3B3-213ENST00000569687 GRAMD1AQ96CP6 724 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 QKIQ96PU8 341 aaKnown RBP eCLIP5.57□□□□□ -1.52
SF3B3-213ENST00000569687 KCTD15Q96SI1 283 aaPredicted RBP5.57□□□□□ -1.52
SF3B3-213ENST00000569687 CYTH2Q99418 400 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 PKMYT1Q99640 499 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 SMOQ99835 787 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 PRMT1Q99873 361 aaKnown RBP5.57□□□□□ -1.52
SF3B3-213ENST00000569687 SELENOSQ9BQE4 189 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 RTP3Q9BQQ7 232 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 SYT15Q9BQS2 421 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 SEZ6LQ9BYH1 1024 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 KLC2Q9H0B6 622 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 TRABDQ9H4I3 376 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 DHX35Q9H5Z1 703 aaKnown RBP5.57□□□□□ -1.52
SF3B3-213ENST00000569687 C10orf88Q9H8K7 445 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 VPS37BQ9H9H4 285 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 GOLGA2P5Q9HBQ8 144 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 ETNK1Q9HBU6 452 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 POPDC2Q9HBU9 364 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 LRRC4Q9HBW1 653 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 XPNPEP3Q9NQH7 507 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 RAB6BQ9NRW1 208 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 RGS18Q9NS28 235 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 ETNK2Q9NVF9 386 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 DNAJC17Q9NVM6 304 aaKnown RBP5.57□□□□□ -1.52
SF3B3-213ENST00000569687 GPATCH2LQ9NWQ4 482 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms