RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 TSPY26PQ9H489 355 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 POPDC2Q9HBU9 364 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 METTL5Q9NRN9 209 aaKnown RBP9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 TMPRSS4Q9NRS4 437 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 DDIT4Q9NX09 232 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 IFNKQ9P0W0 207 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 WDR35Q9P2L0 1181 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 NOCTQ9UK39 431 aaKnown RBP9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 HBS1LQ9Y450 684 aaKnown RBP9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 SNX10Q9Y5X0 201 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 RAD54BQ9Y620 910 aa9.39□□□□□ -0.91
GTF3C1-210ENST00000569394 A0A1B0GTH6 734 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 LRRC10BA6NIK2 292 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 LRRC53A6NM62 1247 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 WASH3PC4AMC7 463 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 PRRT4C9JH25 899 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 M0QYT0 321 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 SGK1O00141 431 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 GFRA3O60609 400 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 CHKAP35790 457 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 GRIA2P42262 883 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 MAGEA9P43362 315 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 RPL34P49207 117 aaKnown RBP9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 NOMO3P69849 1222 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 CDK17Q00537 523 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 CDR2Q01850 454 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 DMC1Q14565 340 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 PPP2R5DQ14738 602 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 ASIC2Q16515 512 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 CDO1Q16878 200 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 EFHC1Q5JVL4 640 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 FYB2Q5VWT5 728 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 EGFLAMQ63HQ2 1017 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 NADSYN1Q6IA69 706 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 ANO7Q6IWH7 933 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 MSANTD2Q6P1R3 559 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 OLFML1Q6UWY5 402 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 ASCL5Q7RTU5 278 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 CIR1Q86X95 450 aaPredicted RBP9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 CACUL1Q86Y37 369 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 XYLT1Q86Y38 959 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 LGI2Q8N0V4 545 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 CARNMT1Q8N4J0 409 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 ZNF276Q8N554 614 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 USP33Q8TEY7 942 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 STK32AQ8WU08 396 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 SORCS1Q8WY21 1168 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 NKD2Q969F2 451 aaPredicted RBP9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 TMA16Q96EY4 203 aaKnown RBP9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 FCRL2Q96LA5 508 aaPredicted RBP9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 AGPAT1Q99943 283 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 CIPCQ9C0C6 399 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 SIK2Q9H0K1 926 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 NUCKS1Q9H1E3 243 aaKnown RBP9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 CACNA2D2Q9NY47 1150 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 BCCIPQ9P287 314 aaKnown RBP eCLIP9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 ZNF510Q9Y2H8 683 aa9.38□□□□□ -0.91
GTF3C1-210ENST00000569394 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 K7ESF4 209 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 DCLK1O15075 740 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 HOXC11O43248 304 aaPredicted RBP9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 SART1O43290 800 aaKnown RBP9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 ACSL4O60488 711 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 HSF2BPO75031 334 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 ATG13O75143 517 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 APOEP02649 317 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 HNRNPLP14866 589 aaKnown RBP eCLIP9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 TNFAIP3P21580 790 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 GBP1P32455 592 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 SLC11A2P49281 568 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 DGKEP52429 567 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 RPS24P62847 133 aaKnown RBP9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 ATP11AP98196 1134 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 NR1I3Q14994 352 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 GEN1Q17RS7 908 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 MPPE1Q53F39 396 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 RAB6CQ53S08 254 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 ADGRF1Q5T601 910 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 NUGGCQ68CJ6 796 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 CEP68Q76N32 757 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 CHSY1Q86X52 802 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 UNC45BQ8IWX7 931 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 ETFBKMTQ8IXQ9 262 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 CHPFQ8IZ52 775 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 SCML4Q8N228 414 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 DCLK2Q8N568 766 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 ZNF366Q8N895 744 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 ZNF513Q8N8E2 541 aaPredicted RBP9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 TERB1Q8NA31 727 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 IL17RCQ8NAC3 791 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 TSTD1Q8NFU3 115 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 WFDC5Q8TCV5 224 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 CYB5D2Q8WUJ1 264 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 HMGB4Q8WW32 186 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 CFAP57Q96MR6 1250 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 SERPINB11Q96P15 392 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 TBCBQ99426 244 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 XPO4Q9C0E2 1151 aaKnown RBP9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 RAB6CQ9H0N0 254 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 IRF2BPLQ9H1B7 796 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms