RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 APOEP02649 317 aa16.67■□□□□ 0.26
USB1-215ENST00000569252 DCNP07585 359 aaKnown RBP16.67■□□□□ 0.26
USB1-215ENST00000569252 CCR1P32246 355 aa16.67■□□□□ 0.26
USB1-215ENST00000569252 FLT3P36888 993 aa16.67■□□□□ 0.26
USB1-215ENST00000569252 ARHGAP25P42331 645 aa16.67■□□□□ 0.26
USB1-215ENST00000569252 PTPN9P43378 593 aa16.67■□□□□ 0.26
USB1-215ENST00000569252 NUBP1P53384 320 aa16.67■□□□□ 0.26
USB1-215ENST00000569252 NNTQ13423 1086 aa16.67■□□□□ 0.26
USB1-215ENST00000569252 ACAP1Q15027 740 aa16.67■□□□□ 0.26
USB1-215ENST00000569252 TRIP4Q15650 581 aaPredicted RBP16.67■□□□□ 0.26
USB1-215ENST00000569252 ARL13BQ3SXY8 428 aa16.67■□□□□ 0.26
USB1-215ENST00000569252 CCDC14Q49A88 953 aa16.67■□□□□ 0.26
USB1-215ENST00000569252 PPP1R15BQ5SWA1 713 aa16.67■□□□□ 0.26
USB1-215ENST00000569252 NUGGCQ68CJ6 796 aa16.67■□□□□ 0.26
USB1-215ENST00000569252 FNIP1Q8TF40 1166 aa16.67■□□□□ 0.26
USB1-215ENST00000569252 FAM172AQ8WUF8 416 aa16.67■□□□□ 0.26
USB1-215ENST00000569252 RFFLQ8WZ73 363 aa16.67■□□□□ 0.26
USB1-215ENST00000569252 USP13Q92995 863 aaPredicted RBP16.67■□□□□ 0.26
USB1-215ENST00000569252 NPY6RQ99463 290 aa16.67■□□□□ 0.26
USB1-215ENST00000569252 KLF16Q9BXK1 252 aaPredicted RBP16.67■□□□□ 0.26
USB1-215ENST00000569252 CFAP97Q9P2B7 532 aa16.67■□□□□ 0.26
USB1-215ENST00000569252 IGSF9Q9P2J2 1179 aa16.67■□□□□ 0.26
USB1-215ENST00000569252 ADGRG1Q9Y653 693 aa16.67■□□□□ 0.26
USB1-215ENST00000569252 SPTBN2O15020 2390 aa16.67■□□□□ 0.26
USB1-215ENST00000569252 OTOGLQ3ZCN5 2332 aa16.67■□□□□ 0.26
USB1-215ENST00000569252 ZNF638Q14966 1978 aaKnown RBP16.66■□□□□ 0.26
USB1-215ENST00000569252 A0A0A6YYK5 440 aaPredicted RBP16.66■□□□□ 0.26
USB1-215ENST00000569252 TCRBV5S1A1TA0A578 114 aa16.66■□□□□ 0.26
USB1-215ENST00000569252 HEPACAM2A8MVW5 462 aa16.66■□□□□ 0.26
USB1-215ENST00000569252 ECI2O75521 394 aa16.66■□□□□ 0.26
USB1-215ENST00000569252 RDXP35241 583 aaKnown RBP16.66■□□□□ 0.26
USB1-215ENST00000569252 VIPR2P41587 438 aa16.66■□□□□ 0.26
USB1-215ENST00000569252 SSR1P43307 286 aaKnown RBP16.66■□□□□ 0.26
USB1-215ENST00000569252 SLC11A2P49281 568 aa16.66■□□□□ 0.26
USB1-215ENST00000569252 TANGO2Q6ICL3 276 aa16.66■□□□□ 0.26
USB1-215ENST00000569252 SCYL2Q6P3W7 929 aa16.66■□□□□ 0.26
USB1-215ENST00000569252 STRADAQ7RTN6 431 aa16.66■□□□□ 0.26
USB1-215ENST00000569252 TAC4Q86UU9 113 aa16.66■□□□□ 0.26
USB1-215ENST00000569252 KIAA2013Q8IYS2 634 aa16.66■□□□□ 0.26
USB1-215ENST00000569252 DCLK2Q8N568 766 aa16.66■□□□□ 0.26
USB1-215ENST00000569252 ATP6V0D2Q8N8Y2 350 aa16.66■□□□□ 0.26
USB1-215ENST00000569252 BPIFB1Q8TDL5 484 aa16.66■□□□□ 0.26
USB1-215ENST00000569252 RMDN1Q96DB5 314 aa16.66■□□□□ 0.26
USB1-215ENST00000569252 PGAP3Q96FM1 320 aaPredicted RBP16.66■□□□□ 0.26
USB1-215ENST00000569252 TBCBQ99426 244 aa16.66■□□□□ 0.26
USB1-215ENST00000569252 DDX50Q9BQ39 737 aaKnown RBP16.66■□□□□ 0.26
USB1-215ENST00000569252 TBC1D14Q9P2M4 693 aa16.66■□□□□ 0.26
USB1-215ENST00000569252 MYO16Q9Y6X6 1858 aa16.65■□□□□ 0.26
USB1-215ENST00000569252 CACNA1IQ9P0X4 2223 aa16.65■□□□□ 0.26
USB1-215ENST00000569252 E2F8A0AVK6 867 aa16.65■□□□□ 0.26
USB1-215ENST00000569252 NRG2O14511 850 aaPredicted RBP16.65■□□□□ 0.26
USB1-215ENST00000569252 CCP110O43303 1012 aa16.65■□□□□ 0.26
USB1-215ENST00000569252 MSI1O43347 362 aaKnown RBP16.65■□□□□ 0.26
USB1-215ENST00000569252 PSMC3P17980 439 aa16.65■□□□□ 0.26
USB1-215ENST00000569252 RING1Q06587 406 aa16.65■□□□□ 0.26
USB1-215ENST00000569252 MESDQ14696 234 aa16.65■□□□□ 0.26
USB1-215ENST00000569252 C15orf59Q2T9L4 293 aaPredicted RBP16.65■□□□□ 0.26
USB1-215ENST00000569252 ARHGAP29Q52LW3 1261 aa16.65■□□□□ 0.26
USB1-215ENST00000569252 BRMS1LQ5PSV4 323 aa16.65■□□□□ 0.26
USB1-215ENST00000569252 PARM1Q6UWI2 310 aa16.65■□□□□ 0.26
USB1-215ENST00000569252 MFSD6LQ8IWD5 586 aa16.65■□□□□ 0.26
USB1-215ENST00000569252 KIAA1958Q8N8K9 716 aa16.65■□□□□ 0.26
USB1-215ENST00000569252 DEPDC1BQ8WUY9 529 aa16.65■□□□□ 0.26
USB1-215ENST00000569252 NT5C3BQ969T7 300 aa16.65■□□□□ 0.26
USB1-215ENST00000569252 RPP25Q9BUL9 199 aaKnown RBP16.65■□□□□ 0.26
USB1-215ENST00000569252 TRMT61BQ9BVS5 477 aaKnown RBP16.65■□□□□ 0.26
USB1-215ENST00000569252 FOXQ1Q9C009 403 aa16.65■□□□□ 0.26
USB1-215ENST00000569252 TBC1D17Q9HA65 648 aa16.65■□□□□ 0.26
USB1-215ENST00000569252 TMEM110-MUSTN1A8MSY1 372 aa16.64■□□□□ 0.25
USB1-215ENST00000569252 BTNL10A8MVZ5 291 aa16.64■□□□□ 0.25
USB1-215ENST00000569252 PJA2O43164 708 aa16.64■□□□□ 0.25
USB1-215ENST00000569252 IRAK2O43187 625 aa16.64■□□□□ 0.25
USB1-215ENST00000569252 PRAMEF12O95522 483 aa16.64■□□□□ 0.25
USB1-215ENST00000569252 TCF3P15923 654 aa16.64■□□□□ 0.25
USB1-215ENST00000569252 CORO1AP31146 461 aaKnown RBP16.64■□□□□ 0.25
USB1-215ENST00000569252 IFNAR2P48551 515 aa16.64■□□□□ 0.25
USB1-215ENST00000569252 PPP2R5DQ14738 602 aa16.64■□□□□ 0.25
USB1-215ENST00000569252 TCEAL1Q15170 157 aa16.64■□□□□ 0.25
USB1-215ENST00000569252 HADHQ16836 314 aaKnown RBP16.64■□□□□ 0.25
USB1-215ENST00000569252 ZC3H12AQ5D1E8 599 aaKnown RBP16.64■□□□□ 0.25
USB1-215ENST00000569252 ACBD5Q5T8D3 534 aaPredicted RBP16.64■□□□□ 0.25
USB1-215ENST00000569252 HTR3DQ70Z44 454 aa16.64■□□□□ 0.25
USB1-215ENST00000569252 DENND1CQ8IV53 801 aa16.64■□□□□ 0.25
USB1-215ENST00000569252 RNF10Q8N5U6 811 aaKnown RBP16.64■□□□□ 0.25
USB1-215ENST00000569252 KXD1Q9BQD3 176 aa16.64■□□□□ 0.25
USB1-215ENST00000569252 OSGEPQ9NPF4 335 aa16.64■□□□□ 0.25
USB1-215ENST00000569252 DUS2Q9NX74 493 aaKnown RBP16.64■□□□□ 0.25
USB1-215ENST00000569252 CCL26Q9Y258 94 aa16.64■□□□□ 0.25
USB1-215ENST00000569252 REXO2Q9Y3B8 237 aaKnown RBP16.64■□□□□ 0.25
USB1-215ENST00000569252 NUMBLQ9Y6R0 609 aa16.64■□□□□ 0.25
USB1-215ENST00000569252 PRPSAP2O60256 369 aa16.63■□□□□ 0.25
USB1-215ENST00000569252 STC2O76061 302 aa16.63■□□□□ 0.25
USB1-215ENST00000569252 ENDOD1O94919 500 aa16.63■□□□□ 0.25
USB1-215ENST00000569252 MOCS2O96007 188 aaPredicted RBP16.63■□□□□ 0.25
USB1-215ENST00000569252 GLULP15104 373 aa16.63■□□□□ 0.25
USB1-215ENST00000569252 CHKAP35790 457 aa16.63■□□□□ 0.25
USB1-215ENST00000569252 CXCR3P49682 368 aa16.63■□□□□ 0.25
USB1-215ENST00000569252 ODF2Q5BJF6 829 aa16.63■□□□□ 0.25
USB1-215ENST00000569252 SLC44A3Q8N4M1 653 aa16.63■□□□□ 0.25
USB1-215ENST00000569252 CENPIQ92674 756 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms