RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 SOX10P56693 466 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 DGUOKQ16854 277 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 MASTLQ96GX5 879 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 TAAR1Q96RJ0 339 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 ACSS3Q9H6R3 686 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 VTI1BQ9UEU0 232 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 PKP3Q9Y446 797 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 NR2E1Q9Y466 385 aa12.72□□□□□ -0.37
CSPG4P13-202ENST00000567704 FAM86B1E9PN63 330 aa12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 TPD52L2O43399 206 aaKnown RBP12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 PYGLP06737 847 aa12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 ATXN8OSP0DMR3 200 aa12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 RPL22P35268 128 aaKnown RBP12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 ABCG1P45844 678 aa12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 RAP1GAPP47736 663 aa12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 LPIN1Q14693 890 aa12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 C3orf67Q6ZVT6 689 aa12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 TMC7Q7Z402 723 aa12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 SYTL1Q8IYJ3 562 aa12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 CENPLQ8N0S6 344 aaPredicted RBP12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 APPL2Q8NEU8 664 aa12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 MAGEE2Q8TD90 523 aaPredicted RBP12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 ABHD8Q96I13 439 aa12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 MTG1Q9BT17 334 aaPredicted RBP12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 AP5M1Q9H0R1 490 aa12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 S100A14Q9HCY8 104 aa12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 C6orf203Q9P0P8 240 aaPredicted RBP12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 ZNF180Q9UJW8 692 aa12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 CHKBQ9Y259 395 aa12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 M0QYT0 321 aa12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 DDX3YO15523 660 aaKnown RBP12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 MED26O95402 600 aa12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 CYP1A2P05177 515 aa12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 MUTP22033 750 aa12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 MAP3K7CLP57077 242 aa12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 TTYH3Q9C0H2 523 aa12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 C12orf65Q9H3J6 166 aaKnown RBP12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 AP4E1Q9UPM8 1137 aa12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 WASF2Q9Y6W5 498 aa12.71□□□□□ -0.37
CSPG4P13-202ENST00000567704 TCRBV7S2A1N4TA0A589 114 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 EML1O00423 815 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 TRDMT1O14717 391 aaKnown RBP12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 TRMUO75648 421 aaKnown RBP12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 RBL1P28749 1068 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 SCNN1BP51168 640 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 RTP1P59025 263 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 CBX3Q13185 183 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 DGCR6Q14129 220 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 TKFCQ3LXA3 575 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 LUZP2Q86TE4 346 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 EGFL6Q8IUX8 553 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 PQLC1Q8N2U9 271 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 FLCNQ8NFG4 579 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 AFG1LQ8WV93 481 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 CGRRF1Q99675 332 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 NMRAL1Q9HBL8 299 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 HBS1LQ9Y450 684 aaKnown RBP12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 NCF1BA6NI72 391 aaPredicted RBP12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 NCF1CA8MVU1 366 aaPredicted RBP12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 IL18RAPO95256 599 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 RARBP10826 455 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 NCF1P14598 390 aaPredicted RBP12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 JAK1P23458 1154 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 CYP2F1P24903 491 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 GRIA3P42263 894 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 ACADSBP45954 432 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 VAC14Q08AM6 782 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 SUPT20HL1Q3ZLR7 823 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 TRIM63Q969Q1 353 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 MMTAG2Q9BU76 263 aaKnown RBP12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 CCDC28BQ9BUN5 200 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 CADM1Q9BY67 442 aaKnown RBP12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 EBF2Q9HAK2 575 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 GPAMQ9HCL2 828 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 GGA3Q9NZ52 723 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 STMN3Q9NZ72 180 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 NDUFAF1Q9Y375 327 aa12.71□□□□□ -0.38
CSPG4P13-202ENST00000567704 TPP1O14773 563 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 SOAT2O75908 522 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 MPOP05164 745 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 MMP10P09238 476 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 TPH1P17752 444 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 CHRM3P20309 590 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 CCNFP41002 786 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 ACVR2BQ13705 512 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 POLD3Q15054 466 aaPredicted RBP12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 TXNRD3Q86VQ6 643 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 ALLCQ8N6M5 410 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 EFHBQ8N7U6 833 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 MBOAT7Q96N66 472 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 VANGL2Q9ULK5 521 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 USP20Q9Y2K6 914 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 ASTN1O14525 1302 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 APOC4-APOC2K7ER74 178 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 OGTO15294 1046 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 ALOX15BO15296 676 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 LYPLA1O75608 230 aaPredicted RBP12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 TM7SF2O76062 418 aa12.7□□□□□ -0.38
CSPG4P13-202ENST00000567704 APOC2P02655 101 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms