RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 TCHHL1Q5QJ38 904 aaPredicted RBP16.16■□□□□ 0.18
COMMD4-215ENST00000566843 N4BP2L1Q5TBK1 243 aaPredicted RBP16.16■□□□□ 0.18
COMMD4-215ENST00000566843 RSBN1LQ6PCB5 846 aaPredicted RBP16.16■□□□□ 0.18
COMMD4-215ENST00000566843 FRMD7Q6ZUT3 714 aa16.16■□□□□ 0.18
COMMD4-215ENST00000566843 DEPDC1BQ8WUY9 529 aa16.16■□□□□ 0.18
COMMD4-215ENST00000566843 JDP2Q8WYK2 163 aa16.16■□□□□ 0.18
COMMD4-215ENST00000566843 LPAR1Q92633 364 aa16.16■□□□□ 0.18
COMMD4-215ENST00000566843 ZNF341Q9BYN7 854 aa16.16■□□□□ 0.18
COMMD4-215ENST00000566843 VPS33BQ9H267 617 aa16.16■□□□□ 0.18
COMMD4-215ENST00000566843 ARHGAP26Q9UNA1 814 aa16.16■□□□□ 0.18
COMMD4-215ENST00000566843 LZTS1Q9Y250 596 aa16.16■□□□□ 0.18
COMMD4-215ENST00000566843 DOCK5Q9H7D0 1870 aa16.16■□□□□ 0.18
COMMD4-215ENST00000566843 HNRNPRO43390 633 aaKnown RBP16.16■□□□□ 0.18
COMMD4-215ENST00000566843 PRKCGP05129 697 aa16.16■□□□□ 0.18
COMMD4-215ENST00000566843 APRTP07741 180 aa16.16■□□□□ 0.18
COMMD4-215ENST00000566843 COX4I1P13073 169 aa16.16■□□□□ 0.18
COMMD4-215ENST00000566843 CD19P15391 556 aa16.16■□□□□ 0.18
COMMD4-215ENST00000566843 PMLP29590 882 aa16.16■□□□□ 0.18
COMMD4-215ENST00000566843 CXCL9Q07325 125 aa16.16■□□□□ 0.18
COMMD4-215ENST00000566843 STEAP4Q687X5 459 aa16.16■□□□□ 0.18
COMMD4-215ENST00000566843 KLC3Q6P597 504 aa16.16■□□□□ 0.18
COMMD4-215ENST00000566843 BORAQ6PGQ7 559 aa16.16■□□□□ 0.18
COMMD4-215ENST00000566843 ZPBP2Q6X784 338 aa16.16■□□□□ 0.18
COMMD4-215ENST00000566843 SCARA5Q6ZMJ2 495 aa16.16■□□□□ 0.18
COMMD4-215ENST00000566843 RSPH3Q86UC2 560 aa16.16■□□□□ 0.18
COMMD4-215ENST00000566843 TICAM1Q8IUC6 712 aa16.16■□□□□ 0.18
COMMD4-215ENST00000566843 HIPK4Q8NE63 616 aa16.16■□□□□ 0.18
COMMD4-215ENST00000566843 PPP4R1Q8TF05 950 aa16.16■□□□□ 0.18
COMMD4-215ENST00000566843 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.15■□□□□ 0.18
COMMD4-215ENST00000566843 ALDH1A2O94788 518 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 ZBED1O96006 694 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 SUPT20HL2P0C7V6 817 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 IL4RP24394 825 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 USP4Q13107 963 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 TRPC3Q13507 836 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 ZNF699Q32M78 642 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 SUPT20HL1Q3ZLR7 823 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 HSP90AA5PQ58FG0 334 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 FAM182AQ5T1J6 154 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 CDAN1Q8IWY9 1227 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 MPP5Q8N3R9 675 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 PQLC3Q8N755 202 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.15■□□□□ 0.18
COMMD4-215ENST00000566843 SLC7A3Q8WY07 619 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 TRIM56Q9BRZ2 755 aaKnown RBP16.15■□□□□ 0.18
COMMD4-215ENST00000566843 SYT17Q9BSW7 474 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 CNPY3Q9BT09 278 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 GCOM2Q9BZD3 368 aaPredicted RBP16.15■□□□□ 0.18
COMMD4-215ENST00000566843 DCDC2Q9UHG0 476 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 DMTF1Q9Y222 760 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 FER1L6Q2WGJ9 1857 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 STK10O94804 968 aaKnown RBP16.15■□□□□ 0.18
COMMD4-215ENST00000566843 KCNA4P22459 653 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 ARRB2P32121 409 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 APOFQ13790 326 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 PDE1CQ14123 709 aaPredicted RBP16.15■□□□□ 0.18
COMMD4-215ENST00000566843 PDK2Q15119 407 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 SURF1Q15526 300 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 INSCQ1MX18 579 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 SLC9A4Q6AI14 798 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 PHTF2Q8N3S3 785 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 TIMMDC1Q9NPL8 285 aa16.15■□□□□ 0.18
COMMD4-215ENST00000566843 APOL1O14791 398 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 TNFAIP8O95379 198 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 CRTAMO95727 393 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 ALDOAP04075 364 aaKnown RBP16.14■□□□□ 0.17
COMMD4-215ENST00000566843 CAPNS1P04632 268 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 GPD1P21695 349 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 NUMBP49757 651 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 ABCE1P61221 599 aaKnown RBP16.14■□□□□ 0.17
COMMD4-215ENST00000566843 NIPAL4Q0D2K0 466 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 BAATQ14032 418 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-215ENST00000566843 MYLK3Q32MK0 819 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 FSCBQ5H9T9 825 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 EFCAB3Q8N7B9 438 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 CATSPER1Q8NEC5 780 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 CATSPER2Q96P56 530 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 STK39Q9UEW8 545 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 PADI4Q9UM07 663 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 PRPF19Q9UMS4 504 aaKnown RBP16.14■□□□□ 0.17
COMMD4-215ENST00000566843 ZSCAN9O15535 394 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-215ENST00000566843 ADCY3O60266 1144 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 GCATO75600 419 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 MYBPC1Q00872 1141 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 KLF10Q13118 480 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 SH3PXD2AQ5TCZ1 1133 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 FKBP1CQ5VVH2 108 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 C10orf107Q8IVU9 208 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 MAP7D3Q8IWC1 876 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 ZFP28Q8NHY6 868 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 MIPOL1Q8TD10 442 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 DDI1Q8WTU0 396 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 DNAJC1Q96KC8 554 aaKnown RBP16.14■□□□□ 0.17
COMMD4-215ENST00000566843 ADPGKQ9BRR6 497 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 SHCBP1LQ9BZQ2 653 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 SENP6Q9GZR1 1112 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-215ENST00000566843 SUDS3Q9H7L9 328 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-215ENST00000566843 IFT122Q9HBG6 1241 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 PGAP2Q9UHJ9 254 aa16.14■□□□□ 0.17
COMMD4-215ENST00000566843 MAFBQ9Y5Q3 323 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms