RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 RHOT2Q8IXI1 618 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 TXLNBQ8N3L3 684 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 BPIFB1Q8TDL5 484 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 ADAMTS19Q8TE59 1207 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 FNIP1Q8TF40 1166 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 DEPDC1BQ8WUY9 529 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 PRR14Q9BWN1 585 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 TRIM7Q9C029 511 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 GKN1Q9NS71 199 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 UVRAGQ9P2Y5 699 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 TFR2Q9UP52 801 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 TLR6Q9Y2C9 796 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 TICRRQ7Z2Z1 1910 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 C5orf42Q9H799 3197 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 TMEM191CA6NGB0 347 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 IGLV3-27P01718 113 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 ASGR2P07307 311 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 CORO1AP31146 461 aaKnown RBP11.93□□□□□ -0.5
KARS-207ENST00000566560 HARS2P49590 506 aaKnown RBP11.93□□□□□ -0.5
KARS-207ENST00000566560 RING1Q06587 406 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 ZNF252P-AS1Q0IIN9 211 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 CCDC14Q49A88 953 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 TJAP1Q5JTD0 557 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 NUGGCQ68CJ6 796 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 CC2D1AQ6P1N0 951 aaPredicted RBP11.93□□□□□ -0.5
KARS-207ENST00000566560 SND1Q7KZF4 910 aaKnown RBP eCLIP11.93□□□□□ -0.5
KARS-207ENST00000566560 YAF2Q8IY57 180 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 FAM172AQ8WUF8 416 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 RSAD2Q8WXG1 361 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 RNF34Q969K3 372 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 NT5C3BQ969T7 300 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 WBP2Q969T9 261 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 FCRL2Q96LA5 508 aaPredicted RBP11.93□□□□□ -0.5
KARS-207ENST00000566560 CNPY3Q9BT09 278 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 KCNF1Q9H3M0 494 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 KCNK12Q9HB15 430 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 OSGEPQ9NPF4 335 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 PLSCR2Q9NRY7 297 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 PIGVQ9NUD9 493 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 CALCOCO1Q9P1Z2 691 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 IGSF9Q9P2J2 1179 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 LIMD1Q9UGP4 676 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 PAXBP1Q9Y5B6 917 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 COL4A2P08572 1712 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 MYO10Q9HD67 2058 aa11.93□□□□□ -0.5
KARS-207ENST00000566560 NCOR1O75376 2440 aa11.92□□□□□ -0.5
KARS-207ENST00000566560 MTA2O94776 668 aa11.92□□□□□ -0.5
KARS-207ENST00000566560 MOCS2O96007 188 aaPredicted RBP11.92□□□□□ -0.5
KARS-207ENST00000566560 F9P00740 461 aa11.92□□□□□ -0.5
KARS-207ENST00000566560 CCDC175P0C221 793 aa11.92□□□□□ -0.5
KARS-207ENST00000566560 PSMC3P17980 439 aa11.92□□□□□ -0.5
KARS-207ENST00000566560 CCR1P32246 355 aa11.92□□□□□ -0.5
KARS-207ENST00000566560 IFNAR2P48551 515 aa11.92□□□□□ -0.5
KARS-207ENST00000566560 ATXN1P54253 815 aaKnown RBP11.92□□□□□ -0.5
KARS-207ENST00000566560 HDAC4P56524 1084 aa11.92□□□□□ -0.5
KARS-207ENST00000566560 FCHO2Q0JRZ9 810 aa11.92□□□□□ -0.5
KARS-207ENST00000566560 ZC3H12AQ5D1E8 599 aaKnown RBP11.92□□□□□ -0.5
KARS-207ENST00000566560 Q6ZNB5 142 aa11.92□□□□□ -0.5
KARS-207ENST00000566560 STRADAQ7RTN6 431 aa11.92□□□□□ -0.5
KARS-207ENST00000566560 BNIPLQ7Z465 357 aa11.92□□□□□ -0.5
KARS-207ENST00000566560 FAM131BQ86XD5 332 aa11.92□□□□□ -0.5
KARS-207ENST00000566560 MFSD6LQ8IWD5 586 aa11.92□□□□□ -0.5
KARS-207ENST00000566560 UNC45BQ8IWX7 931 aa11.92□□□□□ -0.5
KARS-207ENST00000566560 SLC35G2Q8TBE7 412 aa11.92□□□□□ -0.5
KARS-207ENST00000566560 NXPE3Q969Y0 559 aa11.92□□□□□ -0.5
KARS-207ENST00000566560 PGAP3Q96FM1 320 aaPredicted RBP11.92□□□□□ -0.5
KARS-207ENST00000566560 SLC39A13Q96H72 371 aa11.92□□□□□ -0.5
KARS-207ENST00000566560 BTBD6Q96KE9 485 aa11.92□□□□□ -0.5
KARS-207ENST00000566560 ZNF830Q96NB3 372 aaPredicted RBP11.92□□□□□ -0.5
KARS-207ENST00000566560 LRRC3BQ96PB8 259 aa11.92□□□□□ -0.5
KARS-207ENST00000566560 RPP25Q9BUL9 199 aaKnown RBP11.92□□□□□ -0.5
KARS-207ENST00000566560 PLA2G2FQ9BZM2 168 aa11.92□□□□□ -0.5
KARS-207ENST00000566560 DCLK3Q9C098 648 aa11.92□□□□□ -0.5
KARS-207ENST00000566560 THG1LQ9NWX6 298 aaKnown RBP11.92□□□□□ -0.5
KARS-207ENST00000566560 IP6K2Q9UHH9 426 aa11.92□□□□□ -0.5
KARS-207ENST00000566560 WNT6Q9Y6F9 365 aa11.92□□□□□ -0.5
KARS-207ENST00000566560 A0A0A6YYK5 440 aaPredicted RBP11.91□□□□□ -0.5
KARS-207ENST00000566560 E2F8A0AVK6 867 aa11.91□□□□□ -0.5
KARS-207ENST00000566560 TMEM110-MUSTN1A8MSY1 372 aa11.91□□□□□ -0.5
KARS-207ENST00000566560 MYO1FO00160 1098 aa11.91□□□□□ -0.5
KARS-207ENST00000566560 SLC9A3R1O14745 358 aaPredicted RBP11.91□□□□□ -0.5
KARS-207ENST00000566560 SLC2A3P11169 496 aa11.91□□□□□ -0.5
KARS-207ENST00000566560 GDI1P31150 447 aa11.91□□□□□ -0.5
KARS-207ENST00000566560 KIF5AQ12840 1032 aa11.91□□□□□ -0.5
KARS-207ENST00000566560 EIF4EBP2Q13542 120 aaPredicted RBP11.91□□□□□ -0.5
KARS-207ENST00000566560 PIGHQ14442 188 aaPredicted RBP11.91□□□□□ -0.5
KARS-207ENST00000566560 PPP2R5DQ14738 602 aa11.91□□□□□ -0.5
KARS-207ENST00000566560 ARHGAP29Q52LW3 1261 aa11.91□□□□□ -0.5
KARS-207ENST00000566560 BRMS1LQ5PSV4 323 aa11.91□□□□□ -0.5
KARS-207ENST00000566560 SH3PXD2AQ5TCZ1 1133 aa11.91□□□□□ -0.5
KARS-207ENST00000566560 NYAP1Q6ZVC0 841 aa11.91□□□□□ -0.5
KARS-207ENST00000566560 HTR3DQ70Z44 454 aa11.91□□□□□ -0.5
KARS-207ENST00000566560 DENND1CQ8IV53 801 aa11.91□□□□□ -0.5
KARS-207ENST00000566560 BBS7Q8IWZ6 715 aa11.91□□□□□ -0.5
KARS-207ENST00000566560 KIAA1958Q8N8K9 716 aa11.91□□□□□ -0.5
KARS-207ENST00000566560 OSCP1Q8WVF1 389 aa11.91□□□□□ -0.5
KARS-207ENST00000566560 CENPIQ92674 756 aaPredicted RBP11.91□□□□□ -0.5
KARS-207ENST00000566560 RNF166Q96A37 237 aaPredicted RBP11.91□□□□□ -0.5
KARS-207ENST00000566560 ASIC4Q96FT7 647 aa11.91□□□□□ -0.5
KARS-207ENST00000566560 ZFYVE19Q96K21 471 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms