RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 DENND5BQ6ZUT9 1274 aa11.75□□□□□ -0.53
LINC00562-201ENST00000566385 RFX8Q6ZV50 586 aa11.75□□□□□ -0.53
LINC00562-201ENST00000566385 ANKS3Q6ZW76 656 aa11.75□□□□□ -0.53
LINC00562-201ENST00000566385 AUTS2Q8WXX7 1259 aa11.75□□□□□ -0.53
LINC00562-201ENST00000566385 RNF34Q969K3 372 aa11.75□□□□□ -0.53
LINC00562-201ENST00000566385 NTAN1Q96AB6 310 aa11.75□□□□□ -0.53
LINC00562-201ENST00000566385 C9orf72Q96LT7 481 aa11.75□□□□□ -0.53
LINC00562-201ENST00000566385 SIK2Q9H0K1 926 aa11.75□□□□□ -0.53
LINC00562-201ENST00000566385 GMIPQ9P107 970 aa11.75□□□□□ -0.53
LINC00562-201ENST00000566385 OR12D3Q9UGF7 316 aa11.75□□□□□ -0.53
LINC00562-201ENST00000566385 FARP1Q9Y4F1 1045 aaPredicted RBP11.75□□□□□ -0.53
LINC00562-201ENST00000566385 ABHD14A-ACY1A0A1B0GW23 586 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 TRIM66O15016 1216 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 IRAK2O43187 625 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 TMEM63AO94886 807 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 HSPA1AP0DMV8 641 aaKnown RBP11.74□□□□□ -0.53
LINC00562-201ENST00000566385 HSPA1BP0DMV9 641 aaKnown RBP11.74□□□□□ -0.53
LINC00562-201ENST00000566385 ERCC2P18074 760 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 EN2P19622 333 aaPredicted RBP11.74□□□□□ -0.53
LINC00562-201ENST00000566385 MAGEA11P43364 429 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 SCAPQ12770 1279 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 ELAVL2Q12926 359 aaKnown RBP11.74□□□□□ -0.53
LINC00562-201ENST00000566385 DPYSQ14117 519 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 USP41Q3LFD5 358 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 FAXCQ5TGI0 409 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 RASIP1Q5U651 963 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 PSTKQ8IV42 348 aaKnown RBP11.74□□□□□ -0.53
LINC00562-201ENST00000566385 CCDC110Q8TBZ0 833 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 PRCCQ92733 491 aaPredicted RBP11.74□□□□□ -0.53
LINC00562-201ENST00000566385 RBM15Q96T37 977 aaKnown RBP eCLIP11.74□□□□□ -0.53
LINC00562-201ENST00000566385 CLSTN3Q9BQT9 956 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 CEP41Q9BYV8 373 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 CENPHQ9H3R5 247 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 ADAM21Q9UKJ8 722 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 SCML2Q9UQR0 700 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 PLXNA3P51805 1871 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 KIAA0355O15063 1070 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 DCLK1O15075 740 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 LRIG2O94898 1065 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 F9P00740 461 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 VAV1P15498 845 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 STIP1P31948 543 aaKnown RBP11.74□□□□□ -0.53
LINC00562-201ENST00000566385 BASP1P80723 227 aaKnown RBP11.74□□□□□ -0.53
LINC00562-201ENST00000566385 TAF10Q12962 218 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 BTG3Q14201 252 aaPredicted RBP11.74□□□□□ -0.53
LINC00562-201ENST00000566385 SLMAPQ14BN4 828 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 PSMD5Q16401 504 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 PKN2Q16513 984 aaKnown RBP11.74□□□□□ -0.53
LINC00562-201ENST00000566385 MSS51Q4VC12 460 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 MON1AQ86VX9 555 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 NPWQ8N729 165 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 OLFM3Q96PB7 478 aa11.74□□□□□ -0.53
LINC00562-201ENST00000566385 BCLAF3A2AJT9 711 aaKnown RBP11.73□□□□□ -0.53
LINC00562-201ENST00000566385 SRGAP2BP0DMP2 458 aa11.73□□□□□ -0.53
LINC00562-201ENST00000566385 HAPLN1P10915 354 aaPredicted RBP11.73□□□□□ -0.53
LINC00562-201ENST00000566385 RFC2P35250 354 aa11.73□□□□□ -0.53
LINC00562-201ENST00000566385 CAV1Q03135 178 aa11.73□□□□□ -0.53
LINC00562-201ENST00000566385 DNAJC21Q5F1R6 531 aaKnown RBP11.73□□□□□ -0.53
LINC00562-201ENST00000566385 ARTNQ5T4W7 220 aa11.73□□□□□ -0.53
LINC00562-201ENST00000566385 SLC8B1Q6J4K2 584 aa11.73□□□□□ -0.53
LINC00562-201ENST00000566385 ZCCHC9Q8N567 271 aaKnown RBP11.73□□□□□ -0.53
LINC00562-201ENST00000566385 NAT8LQ8N9F0 302 aa11.73□□□□□ -0.53
LINC00562-201ENST00000566385 SPPL2BQ8TCT7 592 aa11.73□□□□□ -0.53
LINC00562-201ENST00000566385 CCHCR1Q8TD31 782 aa11.73□□□□□ -0.53
LINC00562-201ENST00000566385 TMEM106CQ9BVX2 250 aa11.73□□□□□ -0.53
LINC00562-201ENST00000566385 SMOC2Q9H3U7 446 aa11.73□□□□□ -0.53
LINC00562-201ENST00000566385 RRN3Q9NYV6 651 aa11.73□□□□□ -0.53
LINC00562-201ENST00000566385 IL37Q9NZH6 218 aa11.73□□□□□ -0.53
LINC00562-201ENST00000566385 MTRRQ9UBK8 725 aa11.73□□□□□ -0.53
LINC00562-201ENST00000566385 MAGED2Q9UNF1 606 aaPredicted RBP11.73□□□□□ -0.53
LINC00562-201ENST00000566385 UNC80Q8N2C7 3258 aa11.73□□□□□ -0.53
LINC00562-201ENST00000566385 SMIM23A6NLE4 172 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 F5H423 210 aaPredicted RBP11.72□□□□□ -0.53
LINC00562-201ENST00000566385 H3BRJ5 948 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 OPA1O60313 960 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 SEC24AO95486 1093 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 MOCS2O96007 188 aaPredicted RBP11.72□□□□□ -0.53
LINC00562-201ENST00000566385 NUDT17P0C025 328 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 DNAJB2P25686 324 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 MORF4L2Q15014 288 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 FNBP1LQ5T0N5 605 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 DENND2CQ68D51 928 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 KIAA1841Q6NSI8 718 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 LRIG3Q6UXM1 1119 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 GOLGA6L1Q8N7Z2 621 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 FAM129AQ9BZQ8 928 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 TMBIM4Q9HC24 238 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 NINJ2Q9NZG7 142 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 RCOR3Q9P2K3 495 aaPredicted RBP11.72□□□□□ -0.53
LINC00562-201ENST00000566385 FAM92AA1XBS5 289 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 GOLGA6CA6NDK9 693 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 H7C4K7 107 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 METTL18O95568 372 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 TTC4O95801 387 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 GOLGA6DP0CG33 693 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 YWHAQP27348 245 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 EPHB2P29323 1055 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 SLCO1A2P46721 670 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 NR2C2P49116 596 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 TPI1P60174 286 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms