RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 NIPAL4Q0D2K0 466 aa22.27■■□□□ 1.16
SPSB3-208ENST00000566339 ITGA9Q13797 1035 aa22.27■■□□□ 1.16
SPSB3-208ENST00000566339 FSCBQ5H9T9 825 aa22.27■■□□□ 1.16
SPSB3-208ENST00000566339 RASSF3Q86WH2 238 aa22.27■■□□□ 1.16
SPSB3-208ENST00000566339 PCDH19Q8TAB3 1148 aa22.27■■□□□ 1.16
SPSB3-208ENST00000566339 DNAJC16Q9Y2G8 782 aa22.27■■□□□ 1.16
SPSB3-208ENST00000566339 ANK1P16157 1881 aa22.26■■□□□ 1.15
SPSB3-208ENST00000566339 CYB561D2O14569 222 aa22.26■■□□□ 1.15
SPSB3-208ENST00000566339 LGR5O75473 907 aa22.26■■□□□ 1.15
SPSB3-208ENST00000566339 ITGBL1O95965 494 aaPredicted RBP22.26■■□□□ 1.15
SPSB3-208ENST00000566339 C6orf222P0C671 652 aaPredicted RBP22.26■■□□□ 1.15
SPSB3-208ENST00000566339 UBTFL6P0CB48 400 aaPredicted RBP22.26■■□□□ 1.15
SPSB3-208ENST00000566339 HARS2P49590 506 aaKnown RBP22.26■■□□□ 1.15
SPSB3-208ENST00000566339 BIRC2Q13490 618 aa22.26■■□□□ 1.15
SPSB3-208ENST00000566339 MTM1Q13496 603 aa22.26■■□□□ 1.15
SPSB3-208ENST00000566339 BMPR2Q13873 1038 aa22.26■■□□□ 1.15
SPSB3-208ENST00000566339 CNPY1Q3B7I2 92 aa22.26■■□□□ 1.15
SPSB3-208ENST00000566339 RASIP1Q5U651 963 aa22.26■■□□□ 1.15
SPSB3-208ENST00000566339 METTL7BQ6UX53 244 aa22.26■■□□□ 1.15
SPSB3-208ENST00000566339 NT5DC4Q86YG4 428 aa22.26■■□□□ 1.15
SPSB3-208ENST00000566339 C1orf127Q8N9H9 656 aa22.26■■□□□ 1.15
SPSB3-208ENST00000566339 RNF149Q8NC42 400 aa22.26■■□□□ 1.15
SPSB3-208ENST00000566339 QKIQ96PU8 341 aaKnown RBP eCLIP22.26■■□□□ 1.15
SPSB3-208ENST00000566339 TUBGCP5Q96RT8 1024 aa22.26■■□□□ 1.15
SPSB3-208ENST00000566339 KCNK16Q96T55 309 aa22.26■■□□□ 1.15
SPSB3-208ENST00000566339 HACL1Q9UJ83 578 aa22.26■■□□□ 1.15
SPSB3-208ENST00000566339 STK10O94804 968 aaKnown RBP22.25■■□□□ 1.15
SPSB3-208ENST00000566339 HK2P52789 917 aa22.25■■□□□ 1.15
SPSB3-208ENST00000566339 CCDC14Q49A88 953 aa22.25■■□□□ 1.15
SPSB3-208ENST00000566339 NBPF12Q5TAG4 269 aaPredicted RBP22.25■■□□□ 1.15
SPSB3-208ENST00000566339 OR6B2Q6IFH4 312 aa22.25■■□□□ 1.15
SPSB3-208ENST00000566339 FAM183BPQ6ZVS7 135 aa22.25■■□□□ 1.15
SPSB3-208ENST00000566339 PLPPR4Q7Z2D5 763 aa22.25■■□□□ 1.15
SPSB3-208ENST00000566339 C20orf27Q9GZN8 174 aa22.25■■□□□ 1.15
SPSB3-208ENST00000566339 PICK1Q9NRD5 415 aa22.25■■□□□ 1.15
SPSB3-208ENST00000566339 ADAM28Q9UKQ2 775 aa22.25■■□□□ 1.15
SPSB3-208ENST00000566339 MAD1L1Q9Y6D9 718 aa22.25■■□□□ 1.15
SPSB3-208ENST00000566339 CCDC195A0A1B0GUA6 201 aa22.25■■□□□ 1.15
SPSB3-208ENST00000566339 H2AFYO75367 372 aaKnown RBP22.25■■□□□ 1.15
SPSB3-208ENST00000566339 KRT19P08727 400 aa22.25■■□□□ 1.15
SPSB3-208ENST00000566339 MCF2P10911 925 aa22.25■■□□□ 1.15
SPSB3-208ENST00000566339 RAP1GAPP47736 663 aa22.25■■□□□ 1.15
SPSB3-208ENST00000566339 NRLP54845 237 aa22.25■■□□□ 1.15
SPSB3-208ENST00000566339 UBAP2LQ14157 1087 aaKnown RBP22.25■■□□□ 1.15
SPSB3-208ENST00000566339 DPYSL2Q16555 572 aa22.25■■□□□ 1.15
SPSB3-208ENST00000566339 FAM187BQ17R55 369 aa22.25■■□□□ 1.15
SPSB3-208ENST00000566339 CCDC153Q494R4 210 aa22.25■■□□□ 1.15
SPSB3-208ENST00000566339 MROH9Q5TGP6 573 aa22.25■■□□□ 1.15
SPSB3-208ENST00000566339 CXorf38Q8TB03 319 aa22.25■■□□□ 1.15
SPSB3-208ENST00000566339 ISL2Q96A47 359 aa22.25■■□□□ 1.15
SPSB3-208ENST00000566339 CLPTM1LQ96KA5 538 aa22.25■■□□□ 1.15
SPSB3-208ENST00000566339 TWNKQ96RR1 684 aa22.25■■□□□ 1.15
SPSB3-208ENST00000566339 EBF4Q9BQW3 602 aa22.25■■□□□ 1.15
SPSB3-208ENST00000566339 BCAP29Q9UHQ4 241 aa22.25■■□□□ 1.15
SPSB3-208ENST00000566339 ARHGAP42A6NI28 874 aa22.24■■□□□ 1.15
SPSB3-208ENST00000566339 SLC22A2O15244 555 aa22.24■■□□□ 1.15
SPSB3-208ENST00000566339 SIN3BO75182 1162 aa22.24■■□□□ 1.15
SPSB3-208ENST00000566339 KITP10721 976 aa22.24■■□□□ 1.15
SPSB3-208ENST00000566339 SDC4P31431 198 aa22.24■■□□□ 1.15
SPSB3-208ENST00000566339 EPHX2P34913 555 aa22.24■■□□□ 1.15
SPSB3-208ENST00000566339 GARSP41250 739 aaKnown RBP22.24■■□□□ 1.15
SPSB3-208ENST00000566339 PTPN9P43378 593 aa22.24■■□□□ 1.15
SPSB3-208ENST00000566339 SLC26A2P50443 739 aa22.24■■□□□ 1.15
SPSB3-208ENST00000566339 HTRA3P83110 453 aa22.24■■□□□ 1.15
SPSB3-208ENST00000566339 FRG1Q14331 258 aaKnown RBP22.24■■□□□ 1.15
SPSB3-208ENST00000566339 FAXCQ5TGI0 409 aa22.24■■□□□ 1.15
SPSB3-208ENST00000566339 TRNP1Q6NT89 227 aa22.24■■□□□ 1.15
SPSB3-208ENST00000566339 HEXIM2Q96MH2 286 aaKnown RBP22.24■■□□□ 1.15
SPSB3-208ENST00000566339 CDT1Q9H211 546 aa22.24■■□□□ 1.15
SPSB3-208ENST00000566339 SMYD3Q9H7B4 428 aa22.24■■□□□ 1.15
SPSB3-208ENST00000566339 PRMT7Q9NVM4 692 aaPredicted RBP22.24■■□□□ 1.15
SPSB3-208ENST00000566339 C6orf203Q9P0P8 240 aaPredicted RBP22.24■■□□□ 1.15
SPSB3-208ENST00000566339 UGT1A9O60656 530 aa22.23■■□□□ 1.15
SPSB3-208ENST00000566339 MX2P20592 715 aa22.23■■□□□ 1.15
SPSB3-208ENST00000566339 APLP1P51693 650 aa22.23■■□□□ 1.15
SPSB3-208ENST00000566339 CDH8P55286 799 aa22.23■■□□□ 1.15
SPSB3-208ENST00000566339 PDE1BQ01064 536 aa22.23■■□□□ 1.15
SPSB3-208ENST00000566339 LRRC8BQ6P9F7 803 aa22.23■■□□□ 1.15
SPSB3-208ENST00000566339 TRMT10BQ6PF06 316 aaKnown RBP22.23■■□□□ 1.15
SPSB3-208ENST00000566339 PACS1Q6VY07 963 aa22.23■■□□□ 1.15
SPSB3-208ENST00000566339 CATSPER1Q8NEC5 780 aa22.23■■□□□ 1.15
SPSB3-208ENST00000566339 GSTCDQ8NEC7 633 aa22.23■■□□□ 1.15
SPSB3-208ENST00000566339 SNRNP25Q9BV90 132 aaKnown RBP22.23■■□□□ 1.15
SPSB3-208ENST00000566339 UGT1A7Q9HAW7 530 aa22.23■■□□□ 1.15
SPSB3-208ENST00000566339 UGT1A10Q9HAW8 530 aa22.23■■□□□ 1.15
SPSB3-208ENST00000566339 UGT1A8Q9HAW9 530 aa22.23■■□□□ 1.15
SPSB3-208ENST00000566339 RCOR3Q9P2K3 495 aaPredicted RBP22.23■■□□□ 1.15
SPSB3-208ENST00000566339 MARCOQ9UEW3 520 aaPredicted RBP22.23■■□□□ 1.15
SPSB3-208ENST00000566339 CDH22Q9UJ99 828 aa22.23■■□□□ 1.15
SPSB3-208ENST00000566339 EMCNQ9ULC0 261 aa22.23■■□□□ 1.15
SPSB3-208ENST00000566339 PRPF19Q9UMS4 504 aaKnown RBP22.23■■□□□ 1.15
SPSB3-208ENST00000566339 HEY1Q9Y5J3 304 aa22.23■■□□□ 1.15
SPSB3-208ENST00000566339 CDY2AQ9Y6F7 541 aa22.23■■□□□ 1.15
SPSB3-208ENST00000566339 CDY1Q9Y6F8 540 aa22.23■■□□□ 1.15
SPSB3-208ENST00000566339 PTPRFP10586 1907 aa22.23■■□□□ 1.15
SPSB3-208ENST00000566339 ATP9BO43861 1147 aa22.22■■□□□ 1.15
SPSB3-208ENST00000566339 PROCP04070 461 aa22.22■■□□□ 1.15
SPSB3-208ENST00000566339 SRGAP2CP0DJJ0 459 aa22.22■■□□□ 1.15
SPSB3-208ENST00000566339 PGAM1P18669 254 aa22.22■■□□□ 1.15
SPSB3-208ENST00000566339 IDH3AP50213 366 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms