RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 FBRSQ9HAH7 460 aa15.84■□□□□ 0.13
CMTM3-212ENST00000566121 CAPN10Q9HC96 672 aa15.84■□□□□ 0.13
CMTM3-212ENST00000566121 KIAA1468Q9P260 1216 aa15.84■□□□□ 0.13
CMTM3-212ENST00000566121 USP36Q9P275 1121 aaKnown RBP15.84■□□□□ 0.13
CMTM3-212ENST00000566121 SLC6A14Q9UN76 642 aa15.84■□□□□ 0.13
CMTM3-212ENST00000566121 INVSQ9Y283 1065 aa15.84■□□□□ 0.13
CMTM3-212ENST00000566121 PCDHB4Q9Y5E5 795 aa15.84■□□□□ 0.13
CMTM3-212ENST00000566121 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.84■□□□□ 0.13
CMTM3-212ENST00000566121 STON1Q9Y6Q2 735 aa15.84■□□□□ 0.13
CMTM3-212ENST00000566121 CHD6Q8TD26 2715 aa15.83■□□□□ 0.13
CMTM3-212ENST00000566121 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.83■□□□□ 0.12
CMTM3-212ENST00000566121 GTPBP10A4D1E9 387 aaKnown RBP15.83■□□□□ 0.12
CMTM3-212ENST00000566121 C4orf47A7E2U8 309 aa15.83■□□□□ 0.12
CMTM3-212ENST00000566121 SERPINF2P08697 491 aa15.83■□□□□ 0.12
CMTM3-212ENST00000566121 HOXD9P28356 352 aaPredicted RBP15.83■□□□□ 0.12
CMTM3-212ENST00000566121 GPD2P43304 727 aa15.83■□□□□ 0.12
CMTM3-212ENST00000566121 ZNF33AQ06730 810 aa15.83■□□□□ 0.12
CMTM3-212ENST00000566121 GEN1Q17RS7 908 aa15.83■□□□□ 0.12
CMTM3-212ENST00000566121 TCEAL6Q6IPX3 200 aa15.83■□□□□ 0.12
CMTM3-212ENST00000566121 KIAA1211LQ6NV74 962 aa15.83■□□□□ 0.12
CMTM3-212ENST00000566121 TMEM110Q86TL2 294 aa15.83■□□□□ 0.12
CMTM3-212ENST00000566121 TMEFF1Q8IYR6 380 aa15.83■□□□□ 0.12
CMTM3-212ENST00000566121 KDM1BQ8NB78 822 aa15.83■□□□□ 0.12
CMTM3-212ENST00000566121 UBA3Q8TBC4 463 aa15.83■□□□□ 0.12
CMTM3-212ENST00000566121 DNASE2BQ8WZ79 361 aa15.83■□□□□ 0.12
CMTM3-212ENST00000566121 PIGKQ92643 395 aa15.83■□□□□ 0.12
CMTM3-212ENST00000566121 TCEAL3Q969E4 200 aa15.83■□□□□ 0.12
CMTM3-212ENST00000566121 TMA16Q96EY4 203 aaKnown RBP15.83■□□□□ 0.12
CMTM3-212ENST00000566121 SMOC1Q9H4F8 434 aa15.83■□□□□ 0.12
CMTM3-212ENST00000566121 TMEM74BQ9NUR3 256 aa15.83■□□□□ 0.12
CMTM3-212ENST00000566121 PLK2Q9NYY3 685 aa15.83■□□□□ 0.12
CMTM3-212ENST00000566121 RWDD2AQ9UIY3 292 aa15.83■□□□□ 0.12
CMTM3-212ENST00000566121 TNRC6BQ9UPQ9 1833 aaKnown RBP15.82■□□□□ 0.12
CMTM3-212ENST00000566121 LTFP02788 710 aa15.82■□□□□ 0.12
CMTM3-212ENST00000566121 NCAM1P13591 858 aa15.82■□□□□ 0.12
CMTM3-212ENST00000566121 UBE2HP62256 183 aa15.82■□□□□ 0.12
CMTM3-212ENST00000566121 RPL6Q02878 288 aaKnown RBP15.82■□□□□ 0.12
CMTM3-212ENST00000566121 ZBTB16Q05516 673 aa15.82■□□□□ 0.12
CMTM3-212ENST00000566121 LRMPQ12912 555 aa15.82■□□□□ 0.12
CMTM3-212ENST00000566121 TRIM61Q5EBN2 209 aa15.82■□□□□ 0.12
CMTM3-212ENST00000566121 N4BP2L1Q5TBK1 243 aaPredicted RBP15.82■□□□□ 0.12
CMTM3-212ENST00000566121 DDI1Q8WTU0 396 aa15.82■□□□□ 0.12
CMTM3-212ENST00000566121 KREMEN1Q96MU8 473 aa15.82■□□□□ 0.12
CMTM3-212ENST00000566121 DDX50Q9BQ39 737 aaKnown RBP15.82■□□□□ 0.12
CMTM3-212ENST00000566121 SRRTQ9BXP5 876 aaKnown RBP15.82■□□□□ 0.12
CMTM3-212ENST00000566121 SLC4A5Q9BY07 1137 aa15.82■□□□□ 0.12
CMTM3-212ENST00000566121 ZDHHC4Q9NPG8 344 aa15.82■□□□□ 0.12
CMTM3-212ENST00000566121 CACNA2D2Q9NY47 1150 aa15.82■□□□□ 0.12
CMTM3-212ENST00000566121 WSB2Q9NYS7 404 aaPredicted RBP15.82■□□□□ 0.12
CMTM3-212ENST00000566121 SUSD2Q9UGT4 822 aa15.82■□□□□ 0.12
CMTM3-212ENST00000566121 GADD45BO75293 160 aaPredicted RBP15.81■□□□□ 0.12
CMTM3-212ENST00000566121 IL12RB1P42701 662 aa15.81■□□□□ 0.12
CMTM3-212ENST00000566121 SLC11A2P49281 568 aa15.81■□□□□ 0.12
CMTM3-212ENST00000566121 SLC14A1Q13336 389 aa15.81■□□□□ 0.12
CMTM3-212ENST00000566121 CAMK2GQ13555 558 aaPredicted RBP15.81■□□□□ 0.12
CMTM3-212ENST00000566121 HNRNPDQ14103 355 aaKnown RBP15.81■□□□□ 0.12
CMTM3-212ENST00000566121 ARID5BQ14865 1188 aa15.81■□□□□ 0.12
CMTM3-212ENST00000566121 FUT11Q495W5 492 aa15.81■□□□□ 0.12
CMTM3-212ENST00000566121 SYCP2LQ5T4T6 812 aa15.81■□□□□ 0.12
CMTM3-212ENST00000566121 PIK3R6Q5UE93 754 aa15.81■□□□□ 0.12
CMTM3-212ENST00000566121 TMEM215Q68D42 235 aa15.81■□□□□ 0.12
CMTM3-212ENST00000566121 ISM2Q6H9L7 571 aa15.81■□□□□ 0.12
CMTM3-212ENST00000566121 KLHL10Q6JEL2 608 aa15.81■□□□□ 0.12
CMTM3-212ENST00000566121 PIP4P1Q86T03 277 aa15.81■□□□□ 0.12
CMTM3-212ENST00000566121 FRMD1Q8N878 549 aa15.81■□□□□ 0.12
CMTM3-212ENST00000566121 GOLGA1Q92805 767 aa15.81■□□□□ 0.12
CMTM3-212ENST00000566121 KAT5Q92993 513 aa15.81■□□□□ 0.12
CMTM3-212ENST00000566121 SLC39A13Q96H72 371 aa15.81■□□□□ 0.12
CMTM3-212ENST00000566121 ZDHHC5Q9C0B5 715 aa15.81■□□□□ 0.12
CMTM3-212ENST00000566121 TMEM245Q9H330 911 aa15.81■□□□□ 0.12
CMTM3-212ENST00000566121 PRDM16Q9HAZ2 1276 aa15.81■□□□□ 0.12
CMTM3-212ENST00000566121 TMEM51Q9NW97 253 aa15.81■□□□□ 0.12
CMTM3-212ENST00000566121 ANGPTL2Q9UKU9 493 aa15.81■□□□□ 0.12
CMTM3-212ENST00000566121 CLEC4EQ9ULY5 219 aa15.81■□□□□ 0.12
CMTM3-212ENST00000566121 TLR6Q9Y2C9 796 aa15.81■□□□□ 0.12
CMTM3-212ENST00000566121 WASH3PC4AMC7 463 aa15.8■□□□□ 0.12
CMTM3-212ENST00000566121 MED7O43513 233 aa15.8■□□□□ 0.12
CMTM3-212ENST00000566121 SYNCRIPO60506 623 aaKnown RBP15.8■□□□□ 0.12
CMTM3-212ENST00000566121 FYNP06241 537 aa15.8■□□□□ 0.12
CMTM3-212ENST00000566121 GLI1P08151 1106 aa15.8■□□□□ 0.12
CMTM3-212ENST00000566121 HMBSP08397 361 aa15.8■□□□□ 0.12
CMTM3-212ENST00000566121 ITPKAP23677 461 aa15.8■□□□□ 0.12
CMTM3-212ENST00000566121 CD6P30203 668 aa15.8■□□□□ 0.12
CMTM3-212ENST00000566121 HLA-FP30511 346 aa15.8■□□□□ 0.12
CMTM3-212ENST00000566121 MTA1Q13330 715 aa15.8■□□□□ 0.12
CMTM3-212ENST00000566121 EIF4EBP2Q13542 120 aaPredicted RBP15.8■□□□□ 0.12
CMTM3-212ENST00000566121 ZNF234Q14588 700 aa15.8■□□□□ 0.12
CMTM3-212ENST00000566121 CT47A1Q5JQC4 288 aaPredicted RBP15.8■□□□□ 0.12
CMTM3-212ENST00000566121 WDR45BQ5MNZ6 344 aa15.8■□□□□ 0.12
CMTM3-212ENST00000566121 RRAGAQ7L523 313 aa15.8■□□□□ 0.12
CMTM3-212ENST00000566121 SLC41A1Q8IVJ1 513 aa15.8■□□□□ 0.12
CMTM3-212ENST00000566121 ARHGEF19Q8IW93 802 aa15.8■□□□□ 0.12
CMTM3-212ENST00000566121 MLKLQ8NB16 471 aa15.8■□□□□ 0.12
CMTM3-212ENST00000566121 FIBINQ8TAL6 211 aa15.8■□□□□ 0.12
CMTM3-212ENST00000566121 NDRG1Q92597 394 aaKnown RBP15.8■□□□□ 0.12
CMTM3-212ENST00000566121 EDEM1Q92611 657 aa15.8■□□□□ 0.12
CMTM3-212ENST00000566121 LMLNQ96KR4 655 aa15.8■□□□□ 0.12
CMTM3-212ENST00000566121 SERPINB11Q96P15 392 aa15.8■□□□□ 0.12
CMTM3-212ENST00000566121 MKRN2Q9H000 416 aaKnown RBP15.8■□□□□ 0.12
CMTM3-212ENST00000566121 SFMBT1Q9UHJ3 866 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms