RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 TEAD4Q15561 434 aa13.38□□□□□ -0.27
RNF40-208ENST00000565995 KIAA0907Q7Z7F0 614 aaPredicted RBP13.38□□□□□ -0.27
RNF40-208ENST00000565995 TMPRSS12Q86WS5 348 aa13.38□□□□□ -0.27
RNF40-208ENST00000565995 OR2T3Q8NH03 318 aa13.38□□□□□ -0.27
RNF40-208ENST00000565995 TMC2Q8TDI7 906 aa13.38□□□□□ -0.27
RNF40-208ENST00000565995 ELMO3Q96BJ8 720 aa13.38□□□□□ -0.27
RNF40-208ENST00000565995 TWNKQ96RR1 684 aa13.38□□□□□ -0.27
RNF40-208ENST00000565995 ORAI3Q9BRQ5 295 aa13.38□□□□□ -0.27
RNF40-208ENST00000565995 DUSP16Q9BY84 665 aa13.38□□□□□ -0.27
RNF40-208ENST00000565995 UBXN6Q9BZV1 441 aa13.38□□□□□ -0.27
RNF40-208ENST00000565995 C6orf106Q9H6K1 298 aaPredicted RBP13.38□□□□□ -0.27
RNF40-208ENST00000565995 FBRSQ9HAH7 460 aa13.38□□□□□ -0.27
RNF40-208ENST00000565995 TM9SF3Q9HD45 589 aa13.38□□□□□ -0.27
RNF40-208ENST00000565995 FAM49BQ9NUQ9 324 aa13.38□□□□□ -0.27
RNF40-208ENST00000565995 NAGPAQ9UK23 515 aa13.38□□□□□ -0.27
RNF40-208ENST00000565995 AGO1Q9UL18 857 aaKnown RBP13.38□□□□□ -0.27
RNF40-208ENST00000565995 EIF4E1BA6NMX2 242 aaKnown RBP13.37□□□□□ -0.27
RNF40-208ENST00000565995 C10orf142B7Z368 130 aa13.37□□□□□ -0.27
RNF40-208ENST00000565995 EPHX1P07099 455 aa13.37□□□□□ -0.27
RNF40-208ENST00000565995 CDK4P11802 303 aa13.37□□□□□ -0.27
RNF40-208ENST00000565995 TRIM21P19474 475 aaKnown RBP13.37□□□□□ -0.27
RNF40-208ENST00000565995 CD27P26842 260 aa13.37□□□□□ -0.27
RNF40-208ENST00000565995 ADORA2BP29275 332 aa13.37□□□□□ -0.27
RNF40-208ENST00000565995 CORO1AP31146 461 aaKnown RBP13.37□□□□□ -0.27
RNF40-208ENST00000565995 CTSKP43235 329 aa13.37□□□□□ -0.27
RNF40-208ENST00000565995 MCCD1P59942 119 aaPredicted RBP13.37□□□□□ -0.27
RNF40-208ENST00000565995 DLG4P78352 724 aa13.37□□□□□ -0.27
RNF40-208ENST00000565995 C1orf220Q5T0J3 134 aa13.37□□□□□ -0.27
RNF40-208ENST00000565995 SV2AQ7L0J3 742 aa13.37□□□□□ -0.27
RNF40-208ENST00000565995 MARCH9Q86YJ5 346 aa13.37□□□□□ -0.27
RNF40-208ENST00000565995 ENGASEQ8NFI3 743 aa13.37□□□□□ -0.27
RNF40-208ENST00000565995 BIRC7Q96CA5 298 aa13.37□□□□□ -0.27
RNF40-208ENST00000565995 NT5C1AQ9BXI3 368 aa13.37□□□□□ -0.27
RNF40-208ENST00000565995 CYP3A43Q9HB55 503 aa13.37□□□□□ -0.27
RNF40-208ENST00000565995 SLC39A2Q9NP94 309 aa13.37□□□□□ -0.27
RNF40-208ENST00000565995 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.37□□□□□ -0.27
RNF40-208ENST00000565995 MTMR6Q9Y217 621 aa13.37□□□□□ -0.27
RNF40-208ENST00000565995 PCDHGA1Q9Y5H4 931 aa13.37□□□□□ -0.27
RNF40-208ENST00000565995 SPTLC2O15270 562 aa13.36□□□□□ -0.27
RNF40-208ENST00000565995 CYBBP04839 570 aa13.36□□□□□ -0.27
RNF40-208ENST00000565995 C1SP09871 688 aa13.36□□□□□ -0.27
RNF40-208ENST00000565995 CCT8P50990 548 aa13.36□□□□□ -0.27
RNF40-208ENST00000565995 C19orf57Q0VDD7 668 aa13.36□□□□□ -0.27
RNF40-208ENST00000565995 RAB41Q5JT25 222 aa13.36□□□□□ -0.27
RNF40-208ENST00000565995 SHC4Q6S5L8 630 aa13.36□□□□□ -0.27
RNF40-208ENST00000565995 SERPINA13PQ6UXR4 307 aa13.36□□□□□ -0.27
RNF40-208ENST00000565995 DENND1CQ8IV53 801 aa13.36□□□□□ -0.27
RNF40-208ENST00000565995 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.36□□□□□ -0.27
RNF40-208ENST00000565995 DHX58Q96C10 678 aa13.36□□□□□ -0.27
RNF40-208ENST00000565995 CRELD1Q96HD1 420 aa13.36□□□□□ -0.27
RNF40-208ENST00000565995 LHX5Q9H2C1 402 aa13.36□□□□□ -0.27
RNF40-208ENST00000565995 KCTD10Q9H3F6 313 aa13.36□□□□□ -0.27
RNF40-208ENST00000565995 PRORYQ9H606 182 aa13.36□□□□□ -0.27
RNF40-208ENST00000565995 STOML2Q9UJZ1 356 aa13.36□□□□□ -0.27
RNF40-208ENST00000565995 FAM149AA5PLN7 773 aa13.35□□□□□ -0.27
RNF40-208ENST00000565995 H0Y8X5 98 aa13.35□□□□□ -0.27
RNF40-208ENST00000565995 PDXKO00764 312 aa13.35□□□□□ -0.27
RNF40-208ENST00000565995 MAPK13O15264 365 aa13.35□□□□□ -0.27
RNF40-208ENST00000565995 ATXN7O15265 892 aaPredicted RBP13.35□□□□□ -0.27
RNF40-208ENST00000565995 CUTAO60888 179 aa13.35□□□□□ -0.27
RNF40-208ENST00000565995 C1QL1O75973 258 aa13.35□□□□□ -0.27
RNF40-208ENST00000565995 SEMA4FO95754 770 aa13.35□□□□□ -0.27
RNF40-208ENST00000565995 HLA-DRAP01903 254 aa13.35□□□□□ -0.27
RNF40-208ENST00000565995 HLA-EP13747 358 aa13.35□□□□□ -0.27
RNF40-208ENST00000565995 EIF2S3P41091 472 aaKnown RBP13.35□□□□□ -0.27
RNF40-208ENST00000565995 ABCG1P45844 678 aa13.35□□□□□ -0.27
RNF40-208ENST00000565995 ENPEPQ07075 957 aa13.35□□□□□ -0.27
RNF40-208ENST00000565995 EFEMP1Q12805 493 aa13.35□□□□□ -0.27
RNF40-208ENST00000565995 STK38Q15208 465 aa13.35□□□□□ -0.27
RNF40-208ENST00000565995 TRIP4Q15650 581 aaPredicted RBP13.35□□□□□ -0.27
RNF40-208ENST00000565995 MPPE1Q53F39 396 aa13.35□□□□□ -0.27
RNF40-208ENST00000565995 KCNT1Q5JUK3 1230 aa13.35□□□□□ -0.27
RNF40-208ENST00000565995 SPOPLQ6IQ16 392 aa13.35□□□□□ -0.27
RNF40-208ENST00000565995 FAM124AQ86V42 546 aa13.35□□□□□ -0.27
RNF40-208ENST00000565995 ARHGAP18Q8N392 663 aa13.35□□□□□ -0.27
RNF40-208ENST00000565995 WFIKKN2Q8TEU8 576 aa13.35□□□□□ -0.27
RNF40-208ENST00000565995 DDI1Q8WTU0 396 aa13.35□□□□□ -0.27
RNF40-208ENST00000565995 SORCS1Q8WY21 1168 aa13.35□□□□□ -0.27
RNF40-208ENST00000565995 PLD4Q96BZ4 506 aa13.35□□□□□ -0.27
RNF40-208ENST00000565995 FAXDC2Q96IV6 333 aa13.35□□□□□ -0.27
RNF40-208ENST00000565995 IRX2Q9BZI1 471 aaPredicted RBP13.35□□□□□ -0.27
RNF40-208ENST00000565995 BTBD1Q9H0C5 482 aa13.35□□□□□ -0.27
RNF40-208ENST00000565995 SGK2Q9HBY8 427 aa13.35□□□□□ -0.27
RNF40-208ENST00000565995 ZNF462Q96JM2 2506 aa13.34□□□□□ -0.27
RNF40-208ENST00000565995 A0A1B0GTQ1 180 aa13.34□□□□□ -0.27
RNF40-208ENST00000565995 GOLGA8CPA6NN73 597 aa13.34□□□□□ -0.27
RNF40-208ENST00000565995 VILLO15195 856 aa13.34□□□□□ -0.27
RNF40-208ENST00000565995 KLRC4O43908 158 aa13.34□□□□□ -0.27
RNF40-208ENST00000565995 HOXD9P28356 352 aaPredicted RBP13.34□□□□□ -0.27
RNF40-208ENST00000565995 CASP1P29466 404 aa13.34□□□□□ -0.27
RNF40-208ENST00000565995 HLA-FP30511 346 aa13.34□□□□□ -0.27
RNF40-208ENST00000565995 ZNF445P59923 1031 aa13.34□□□□□ -0.27
RNF40-208ENST00000565995 RPS14P62263 151 aaKnown RBP13.34□□□□□ -0.27
RNF40-208ENST00000565995 RACK1P63244 317 aaKnown RBP13.34□□□□□ -0.27
RNF40-208ENST00000565995 CUL4BQ13620 913 aa13.34□□□□□ -0.27
RNF40-208ENST00000565995 RTP5Q14D33 572 aa13.34□□□□□ -0.27
RNF40-208ENST00000565995 INAVAQ3KP66 663 aa13.34□□□□□ -0.27
RNF40-208ENST00000565995 PPP1R26Q5T8A7 1209 aaPredicted RBP13.34□□□□□ -0.27
RNF40-208ENST00000565995 PM20D1Q6GTS8 502 aa13.34□□□□□ -0.27
RNF40-208ENST00000565995 DHRS13Q6UX07 377 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms