RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 MRE11P49959 708 aa14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 SEC13P55735 322 aa14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 ZBED6P86452 979 aa14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 MESP2Q0VG99 397 aa14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 C2orf27AQ580R0 203 aa14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 ADGRF1Q5T601 910 aa14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 FYB2Q5VWT5 728 aa14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 GRAMD4Q6IC98 578 aa14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 TOGARAM2Q6ZUX3 1019 aa14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 SYT13Q7L8C5 426 aa14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 SLC26A9Q7LBE3 791 aa14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 ALYREFQ86V81 257 aaKnown RBP14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 DEFB106AQ8N104 65 aa14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 TERB1Q8NA31 727 aa14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 MSANTD4Q8NCY6 345 aa14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 ZNF397Q8NF99 534 aaPredicted RBP14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 SLC30A5Q8TAD4 765 aa14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 USP33Q8TEY7 942 aa14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 CPLX3Q8WVH0 158 aa14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 NKD2Q969F2 451 aaPredicted RBP14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 AZIN2Q96A70 460 aa14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 ACDQ96AP0 544 aa14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 DNAJC17Q9NVM6 304 aaKnown RBP14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 PLK2Q9NYY3 685 aa14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 FBXO10Q9UK96 956 aa14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 SLC8A2Q9UPR5 921 aa14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 TLR6Q9Y2C9 796 aa14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 FAM186AA6NE01 2351 aa14.39□□□□□ -0.11
HERPUD1-210ENST00000565966 GRAP2O75791 330 aa14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 TRUB2O95900 331 aaKnown RBP14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 CISD3P0C7P0 127 aa14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 TNFAIP3P21580 790 aa14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 MMP8P22894 467 aa14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 SCNN1AP37088 669 aa14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 SLC11A2P49281 568 aa14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 DGKGP49619 791 aa14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 PITX1P78337 314 aaPredicted RBP14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 CENPCQ03188 943 aa14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 PTP4A2Q12974 167 aa14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 HSF5Q4G112 596 aaPredicted RBP14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 DCAF6Q58WW2 860 aa14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 SARM1Q6SZW1 724 aa14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 MMS22LQ6ZRQ5 1243 aa14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 ZNF571Q7Z3V5 609 aaPredicted RBP14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 TAC4Q86UU9 113 aa14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 VSTM4Q8IW00 320 aa14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 CAMKK1Q8N5S9 505 aa14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 KCNV2Q8TDN2 545 aa14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 DDI1Q8WTU0 396 aa14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 BHMTQ93088 406 aa14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 SLC39A13Q96H72 371 aa14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 FCRL2Q96LA5 508 aaPredicted RBP14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 C11orf70Q9BRQ4 267 aa14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 IRX2Q9BZI1 471 aaPredicted RBP14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 NUCKS1Q9H1E3 243 aaKnown RBP14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 HAUS4Q9H6D7 363 aa14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 SEPT11Q9NVA2 429 aaKnown RBP14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 LUC7L2Q9Y383 392 aaKnown RBP14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 PTPRZ1P23471 2315 aaPredicted RBP14.38□□□□□ -0.11
HERPUD1-210ENST00000565966 ZFHX2Q9C0A1 2572 aaPredicted RBP14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 GOLGA8SH3BPF8 625 aa14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 TRIM24O15164 1050 aa14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 ACSL4O60488 711 aa14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 LILRB5O75023 590 aa14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 DAB1O75553 588 aa14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 IGLV3-25P01717 112 aa14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 SKILP12757 684 aa14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 HOXD11P31277 338 aaPredicted RBP14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 CASP14P31944 242 aa14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 GBP1P32455 592 aa14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 TIE1P35590 1138 aa14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 KIR2DL1P43626 348 aaPredicted RBP14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 NSFP46459 744 aaKnown RBP14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 CDK17Q00537 523 aa14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 KLHL30Q0D2K2 578 aa14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 DMC1Q14565 340 aa14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 MPPE1Q53F39 396 aa14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 FAM102AQ5T9C2 384 aaPredicted RBP14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 SPECC1LQ69YQ0 1117 aa14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 LONP2Q86WA8 852 aa14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 PHF13Q86YI8 300 aaPredicted RBP14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 SFTPA1Q8IWL2 248 aa14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 ADAM32Q8TC27 787 aa14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 SYN2Q92777 582 aaPredicted RBP14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 TMA16Q96EY4 203 aaKnown RBP14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 P2RY11Q96G91 374 aa14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 DDX50Q9BQ39 737 aaKnown RBP14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 STARD13Q9Y3M8 1113 aa14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 SDK1Q7Z5N4 2213 aa14.37□□□□□ -0.11
HERPUD1-210ENST00000565966 USP34Q70CQ2 3546 aa14.36□□□□□ -0.11
HERPUD1-210ENST00000565966 CCDC163A0A0D9SF12 145 aa14.36□□□□□ -0.11
HERPUD1-210ENST00000565966 ANTXRLA6NF34 631 aa14.36□□□□□ -0.11
HERPUD1-210ENST00000565966 GFRA2O00451 464 aa14.36□□□□□ -0.11
HERPUD1-210ENST00000565966 IRAK2O43187 625 aa14.36□□□□□ -0.11
HERPUD1-210ENST00000565966 LMNAP02545 664 aaKnown RBP14.36□□□□□ -0.11
HERPUD1-210ENST00000565966 CNR2P34972 360 aa14.36□□□□□ -0.11
HERPUD1-210ENST00000565966 NOS2P35228 1153 aa14.36□□□□□ -0.11
HERPUD1-210ENST00000565966 MATKP42679 507 aa14.36□□□□□ -0.11
HERPUD1-210ENST00000565966 FNTBP49356 437 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms