RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 LRRC32Q14392 662 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 PSMD6Q15008 389 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 TCEAL1Q15170 157 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 KRT31Q15323 416 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 NFIL3Q16649 462 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 EDRF1Q3B7T1 1238 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 CBWD6Q4V339 395 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 CBWD3Q5JTY5 395 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 CBWD5Q5RIA9 395 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 EGFLAMQ63HQ2 1017 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 SLFN12LQ6IEE8 588 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 SPOPLQ6IQ16 392 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 GJB7Q6PEY0 223 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 TTC30AQ86WT1 665 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 ZDHHC13Q8IUH4 622 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 BRSK2Q8IWQ3 736 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 TRIM59Q8IWR1 403 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 FAM186BQ8IYM0 893 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 TTC16Q8NEE8 873 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 LMO3Q8TAP4 145 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 TMEM174Q8WUU8 243 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 RLN3Q8WXF3 142 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 SLC35C1Q96A29 364 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 SYAP1Q96A49 352 aaPredicted RBP6.56□□□□□ -1.36
UBFD1-204ENST00000565634 SPACA7Q96KW9 195 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 TRIM56Q9BRZ2 755 aaKnown RBP6.56□□□□□ -1.36
UBFD1-204ENST00000565634 CRACR2AQ9BSW2 395 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 PI4K2AQ9BTU6 479 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 VPS16Q9H269 839 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 SLC32A1Q9H598 525 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 TAB2Q9NYJ8 693 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 RBAKQ9NYW8 714 aaPredicted RBP6.56□□□□□ -1.36
UBFD1-204ENST00000565634 KANSL3Q9P2N6 904 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 AJAP1Q9UKB5 411 aaPredicted RBP6.56□□□□□ -1.36
UBFD1-204ENST00000565634 ADAM28Q9UKQ2 775 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 OAS3Q9Y6K5 1087 aaKnown RBP6.56□□□□□ -1.36
UBFD1-204ENST00000565634 MYH10P35580 1976 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 MGAQ8IWI9 3026 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 UBE4BO95155 1302 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 PTPN13Q12923 2485 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 DENND4CQ5VZ89 1909 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 FAM149AA5PLN7 773 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 FAM221BA6H8Z2 402 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 KCNJ18B7U540 433 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 ARNTLO00327 626 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 CETN3O15182 167 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 MOSPD3O75425 235 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 RHOBTB1O94844 696 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 KCNE1P15382 129 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 ENGP17813 658 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 SLC9A1P19634 815 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 PSMC2P35998 433 aaKnown RBP6.55□□□□□ -1.36
UBFD1-204ENST00000565634 EIF2S3P41091 472 aaKnown RBP6.55□□□□□ -1.36
UBFD1-204ENST00000565634 BRCC3P46736 316 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 CLCNKBP51801 687 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 VAMP7P51809 220 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 DGKEP52429 567 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 MYL6P60660 151 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 TFAMQ00059 246 aaKnown RBP6.55□□□□□ -1.36
UBFD1-204ENST00000565634 LRRC63Q05C16 580 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 DSC1Q08554 894 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 NCBP1Q09161 790 aaKnown RBP6.55□□□□□ -1.36
UBFD1-204ENST00000565634 KCNJ12Q14500 433 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 PCBP1Q15365 356 aaKnown RBP eCLIP6.55□□□□□ -1.36
UBFD1-204ENST00000565634 TEAD2Q15562 447 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 DCAF4L1Q3SXM0 396 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 TRIM61Q5EBN2 209 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 TCP11X2Q5H9J9 407 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 STXBP5Q5T5C0 1151 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 TDRD10Q5VZ19 366 aaKnown RBP6.55□□□□□ -1.36
UBFD1-204ENST00000565634 CCNI2Q6ZMN8 369 aaPredicted RBP6.55□□□□□ -1.36
UBFD1-204ENST00000565634 STXBP4Q6ZWJ1 553 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 ZNF438Q7Z4V0 828 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 SLCO6A1Q86UG4 719 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 TRIM42Q8IWZ5 723 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 YAF2Q8IY57 180 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 C1orf127Q8N9H9 656 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 ZSCAN18Q8TBC5 510 aaPredicted RBP6.55□□□□□ -1.36
UBFD1-204ENST00000565634 TAS1R2Q8TE23 839 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 KAT5Q92993 513 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 CCDC51Q96ER9 411 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 KLHDC7BQ96G42 594 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 CCDC34Q96HJ3 373 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 CNOT6LQ96LI5 555 aaKnown RBP6.55□□□□□ -1.36
UBFD1-204ENST00000565634 CCDC94Q9BW85 323 aaPredicted RBP6.55□□□□□ -1.36
UBFD1-204ENST00000565634 TRIM6Q9C030 488 aaPredicted RBP6.55□□□□□ -1.36
UBFD1-204ENST00000565634 MTMR12Q9C0I1 747 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 C7orf69Q9H7B7 122 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 APOBEC3GQ9HC16 384 aaKnown RBP6.55□□□□□ -1.36
UBFD1-204ENST00000565634 DPP3Q9NY33 737 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 ABI2Q9NYB9 513 aaPredicted RBP6.55□□□□□ -1.36
UBFD1-204ENST00000565634 GDE1Q9NZC3 331 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 CNTN3Q9P232 1028 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 FAM8A1Q9UBU6 413 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 SRPK3Q9UPE1 567 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 GIT1Q9Y2X7 761 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 NME7Q9Y5B8 376 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 KIAA1549LQ6ZVL6 1849 aa6.55□□□□□ -1.36
UBFD1-204ENST00000565634 AHCTF1Q8WYP5 2266 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms