RNA–Protein interactions for RNA: ENST00000565143.1

PKM-214, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 2,301 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-214ENST00000565143 KAT6AQ92794 2004 aa13.19□□□□□ -0.3
PKM-214ENST00000565143 CAPN14A8MX76 684 aa13.19□□□□□ -0.3
PKM-214ENST00000565143 HOXD8P13378 290 aaPredicted RBP13.19□□□□□ -0.3
PKM-214ENST00000565143 ATP6V1C1P21283 382 aa13.19□□□□□ -0.3
PKM-214ENST00000565143 AMPD1P23109 780 aa13.19□□□□□ -0.3
PKM-214ENST00000565143 ATXN1P54253 815 aaKnown RBP13.19□□□□□ -0.3
PKM-214ENST00000565143 WASHC5Q12768 1159 aa13.19□□□□□ -0.3
PKM-214ENST00000565143 SNAPC2Q13487 334 aa13.19□□□□□ -0.3
PKM-214ENST00000565143 CCDC6Q16204 474 aa13.19□□□□□ -0.3
PKM-214ENST00000565143 KIZQ2M2Z5 673 aa13.19□□□□□ -0.3
PKM-214ENST00000565143 KHDC1Q4VXA5 237 aaKnown RBP13.19□□□□□ -0.3
PKM-214ENST00000565143 FBXO47Q5MNV8 452 aa13.19□□□□□ -0.3
PKM-214ENST00000565143 DSTYKQ6XUX3 929 aa13.19□□□□□ -0.3
PKM-214ENST00000565143 DENND5BQ6ZUT9 1274 aa13.19□□□□□ -0.3
PKM-214ENST00000565143 TTC7BQ86TV6 843 aa13.19□□□□□ -0.3
PKM-214ENST00000565143 ALYREFQ86V81 257 aaKnown RBP13.19□□□□□ -0.3
PKM-214ENST00000565143 TMPRSS6Q8IU80 811 aa13.19□□□□□ -0.3
PKM-214ENST00000565143 CCDC185Q8N715 623 aa13.19□□□□□ -0.3
PKM-214ENST00000565143 C18orf25Q96B23 403 aaPredicted RBP13.19□□□□□ -0.3
PKM-214ENST00000565143 TSPAN18Q96SJ8 248 aa13.19□□□□□ -0.3
PKM-214ENST00000565143 NAT9Q9BTE0 207 aa13.19□□□□□ -0.3
PKM-214ENST00000565143 KATNBL1Q9H079 304 aa13.19□□□□□ -0.3
PKM-214ENST00000565143 CXCL16Q9H2A7 254 aa13.19□□□□□ -0.3
PKM-214ENST00000565143 SNX25Q9H3E2 840 aa13.19□□□□□ -0.3
PKM-214ENST00000565143 C2orf71A6NGG8 1288 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 XPOTO43592 962 aaKnown RBP13.18□□□□□ -0.3
PKM-214ENST00000565143 MAGEC1O60732 1142 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 OPHN1O60890 802 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 ZNF189O75820 626 aaPredicted RBP13.18□□□□□ -0.3
PKM-214ENST00000565143 CCDC130P13994 396 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 PNPLA4P41247 253 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 MATKP42679 507 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 BLMHQ13867 455 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 LMNTD2Q8IXW0 634 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 ATP2A3Q93084 1043 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 EIF2AQ9BY44 585 aaKnown RBP13.18□□□□□ -0.3
PKM-214ENST00000565143 GDAP2Q9NXN4 497 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 PPARGC1AQ9UBK2 798 aaKnown RBP13.18□□□□□ -0.3
PKM-214ENST00000565143 FZD10Q9ULW2 581 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 CCDC195A0A1B0GUA6 201 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 WDR27A2RRH5 827 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 PIRO00625 290 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 CYB561D2O14569 222 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 STRNO43815 780 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 GLRA3O75311 464 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 MMP3P08254 477 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 PDGFRBP09619 1106 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 VAV1P15498 845 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 ACADSP16219 412 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 GOT1P17174 413 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 PGM1P36871 562 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 VHLP40337 213 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 GRIA1P42261 906 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 RAP1GDS1P52306 607 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 ZRSR2Q15696 482 aaKnown RBP13.18□□□□□ -0.3
PKM-214ENST00000565143 DGKDQ16760 1214 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 SLC25A52Q3SY17 297 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 COLGALT1Q8NBJ5 622 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 PPP1R14CQ8TAE6 165 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 KBTBD7Q8WVZ9 684 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 LPIN3Q9BQK8 851 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 TRIM6Q9C030 488 aaPredicted RBP13.18□□□□□ -0.3
PKM-214ENST00000565143 TAGLN3Q9UI15 199 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 SORCS3Q9UPU3 1222 aa13.18□□□□□ -0.3
PKM-214ENST00000565143 HBS1LQ9Y450 684 aaKnown RBP13.18□□□□□ -0.3
PKM-214ENST00000565143 SF3B1O75533 1304 aaKnown RBP eCLIP13.18□□□□□ -0.35e-7■■■■■ 63.1
PKM-214ENST00000565143 KPNA7A9QM74 516 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 B2RBV5 119 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 H3BRJ5 948 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 XPO1O14980 1071 aaKnown RBP13.17□□□□□ -0.3
PKM-214ENST00000565143 DAB1O75553 588 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 RECQL4O94761 1208 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 PGAM1P18669 254 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 AXLP30530 894 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 GLUD2P49448 558 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 AQP5P55064 265 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 NIPAL4Q0D2K0 466 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 KPNB1Q14974 876 aaKnown RBP13.17□□□□□ -0.3
PKM-214ENST00000565143 DUSP28Q4G0W2 176 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 HSF5Q4G112 596 aaPredicted RBP13.17□□□□□ -0.3
PKM-214ENST00000565143 CASC4Q6P4E1 433 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 ADGRF2Q8IZF7 708 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 DNAJC9Q8WXX5 260 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 STMN2Q93045 179 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 TNIP3Q96KP6 325 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 TRIM56Q9BRZ2 755 aaKnown RBP13.17□□□□□ -0.3
PKM-214ENST00000565143 STN1Q9H668 368 aaKnown RBP13.17□□□□□ -0.3
PKM-214ENST00000565143 ARHGEF4Q9NR80 690 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 ARMCX1Q9P291 453 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 DCDC2Q9UHG0 476 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 PLXNB2O15031 1838 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 SBF1O95248 1867 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.17□□□□□ -0.3
PKM-214ENST00000565143 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.17□□□□□ -0.3
PKM-214ENST00000565143 SPECC1L-ADORA2AF8WAN1 911 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 GPR32O75388 356 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 PSMG1O95456 288 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 SNAI1O95863 264 aaPredicted RBP13.17□□□□□ -0.3
PKM-214ENST00000565143 SERPINA6P08185 405 aa13.17□□□□□ -0.3
PKM-214ENST00000565143 SULT1E1P49888 294 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms