RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 SYCP1Q15431 976 aa19.08■□□□□ 0.64
SYNGR3-204ENST00000564642 USP39Q53GS9 565 aaKnown RBP19.08■□□□□ 0.64
SYNGR3-204ENST00000564642 DCAF6Q58WW2 860 aa19.08■□□□□ 0.64
SYNGR3-204ENST00000564642 TAF3Q5VWG9 929 aa19.08■□□□□ 0.64
SYNGR3-204ENST00000564642 EGFLAMQ63HQ2 1017 aa19.08■□□□□ 0.64
SYNGR3-204ENST00000564642 TAC4Q86UU9 113 aa19.08■□□□□ 0.64
SYNGR3-204ENST00000564642 KIAA2013Q8IYS2 634 aa19.08■□□□□ 0.64
SYNGR3-204ENST00000564642 CHPFQ8IZ52 775 aa19.08■□□□□ 0.64
SYNGR3-204ENST00000564642 GPR161Q8N6U8 529 aaKnown RBP19.08■□□□□ 0.64
SYNGR3-204ENST00000564642 UCMAQ8WVF2 138 aa19.08■□□□□ 0.64
SYNGR3-204ENST00000564642 FCRL2Q96LA5 508 aaPredicted RBP19.08■□□□□ 0.64
SYNGR3-204ENST00000564642 SPAG5Q96R06 1193 aa19.08■□□□□ 0.64
SYNGR3-204ENST00000564642 TPSD1Q9BZJ3 242 aa19.08■□□□□ 0.64
SYNGR3-204ENST00000564642 NLRC4Q9NPP4 1024 aa19.08■□□□□ 0.64
SYNGR3-204ENST00000564642 ASNSD1Q9NWL6 643 aa19.08■□□□□ 0.64
SYNGR3-204ENST00000564642 BCCIPQ9P287 314 aaKnown RBP eCLIP19.08■□□□□ 0.64
SYNGR3-204ENST00000564642 VPS13AQ96RL7 3174 aa19.08■□□□□ 0.64
SYNGR3-204ENST00000564642 GOLGA6L7A0A1B0GV03 622 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 ZBTB24O43167 697 aaPredicted RBP19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 IRAK2O43187 625 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 HSF2BPO75031 334 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 GFPT2O94808 682 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 TRUB2O95900 331 aaKnown RBP19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 APOEP02649 317 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 ERBB2P04626 1255 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 HOXB2P14652 356 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 HNRNPLP14866 589 aaKnown RBP eCLIP19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 GBP1P32455 592 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 WASP42768 502 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 CDK17Q00537 523 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 SLC6A3Q01959 620 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 E2F5Q15329 346 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 TAF5Q15542 800 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 RFWD3Q6PCD5 774 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 FAM183BPQ6ZVS7 135 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 ERMP1Q7Z2K6 904 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 ANKS1BQ7Z6G8 1248 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 NOP9Q86U38 636 aaKnown RBP19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 RASSF3Q86WH2 238 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 ZDHHC17Q8IUH5 632 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 DEFB106AQ8N104 65 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 PGBD3Q8N328 593 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 FAM160A2Q8N612 972 aaPredicted RBP19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 MDGA1Q8NFP4 955 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 NEK11Q8NG66 645 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 PIWIL1Q96J94 861 aaKnown RBP19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 BPIFA3Q9BQP9 254 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 IRX2Q9BZI1 471 aaPredicted RBP19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 HCN2Q9UL51 889 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 CLEC4EQ9ULY5 219 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 SIK3Q9Y2K2 1263 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 RALGAPA1Q6GYQ0 2036 aa19.07■□□□□ 0.64
SYNGR3-204ENST00000564642 TCRBV21S2A2A0A5A6 115 aa19.06■□□□□ 0.64
SYNGR3-204ENST00000564642 TYW5A2RUC4 315 aaKnown RBP19.06■□□□□ 0.64
SYNGR3-204ENST00000564642 GRAP2O75791 330 aa19.06■□□□□ 0.64
SYNGR3-204ENST00000564642 MOCS2O96007 188 aaPredicted RBP19.06■□□□□ 0.64
SYNGR3-204ENST00000564642 RETP07949 1114 aa19.06■□□□□ 0.64
SYNGR3-204ENST00000564642 HOXD9P28356 352 aaPredicted RBP19.06■□□□□ 0.64
SYNGR3-204ENST00000564642 SOX5P35711 763 aa19.06■□□□□ 0.64
SYNGR3-204ENST00000564642 STAT1P42224 750 aa19.06■□□□□ 0.64
SYNGR3-204ENST00000564642 GEN1Q17RS7 908 aa19.06■□□□□ 0.64
SYNGR3-204ENST00000564642 PTPN20Q4JDL3 420 aa19.06■□□□□ 0.64
SYNGR3-204ENST00000564642 PIK3R6Q5UE93 754 aa19.06■□□□□ 0.64
SYNGR3-204ENST00000564642 KBTBD6Q86V97 674 aa19.06■□□□□ 0.64
SYNGR3-204ENST00000564642 ERICH1Q86X53 443 aa19.06■□□□□ 0.64
SYNGR3-204ENST00000564642 MSANTD4Q8NCY6 345 aa19.06■□□□□ 0.64
SYNGR3-204ENST00000564642 HMGB4Q8WW32 186 aa19.06■□□□□ 0.64
SYNGR3-204ENST00000564642 DDX1Q92499 740 aaKnown RBP19.06■□□□□ 0.64
SYNGR3-204ENST00000564642 SLC39A13Q96H72 371 aa19.06■□□□□ 0.64
SYNGR3-204ENST00000564642 SLC2A13Q96QE2 648 aa19.06■□□□□ 0.64
SYNGR3-204ENST00000564642 ACOX2Q99424 681 aa19.06■□□□□ 0.64
SYNGR3-204ENST00000564642 HSD3B7Q9H2F3 369 aa19.06■□□□□ 0.64
SYNGR3-204ENST00000564642 SLC12A6Q9UHW9 1150 aa19.06■□□□□ 0.64
SYNGR3-204ENST00000564642 RIF1Q5UIP0 2472 aaKnown RBP19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 EPHB6O15197 1021 aa19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 TIMM44O43615 452 aa19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 TBL1XO60907 577 aa19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 LSM8O95777 96 aaKnown RBP19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 MMEP08473 750 aa19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 ATP1A3P13637 1013 aa19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 PTMSP20962 102 aa19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 SLC6A4P31645 630 aa19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 CDH5P33151 784 aaPredicted RBP19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 ZNF165P49910 485 aa19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 ARID5AQ03989 594 aa19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 KLHL40Q2TBA0 621 aa19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 FAM133BQ5BKY9 247 aaKnown RBP19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 ZC3H12AQ5D1E8 599 aaKnown RBP19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 MPP7Q5T2T1 576 aa19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 OLFML1Q6UWY5 402 aa19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 ZNF677Q86XU0 584 aa19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 ATP6V0D2Q8N8Y2 350 aa19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 EPS8L1Q8TE68 723 aa19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 RNF34Q969K3 372 aa19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 C18orf8Q96DM3 657 aa19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 ERGIC2Q96RQ1 377 aa19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 FAM204AQ9H8W3 233 aa19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 INVSQ9Y283 1065 aa19.05■□□□□ 0.64
SYNGR3-204ENST00000564642 FAM186AA6NE01 2351 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms