RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 IGFBP2P18065 325 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 YY1P25490 414 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 GRK5P34947 590 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 ICAM4Q14773 271 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 SEC23BQ15437 767 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 GPR68Q15743 365 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 ANKRD44Q8N8A2 993 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 PNPLA1Q8N8W4 532 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 ZCCHC10Q8TBK6 192 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 MYCBPAPQ8TBZ2 947 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 SSH3Q8TE77 659 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 FKBP10Q96AY3 582 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 R3HDM4Q96D70 268 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 PRR25Q96S07 402 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 EIF3CQ99613 913 aaKnown RBP2.86□□□□□ -1.95
CHD9-209ENST00000564255 KLC4Q9NSK0 619 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 RAB21Q9UL25 225 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 TRPC5Q9UL62 973 aaPredicted RBP2.86□□□□□ -1.95
CHD9-209ENST00000564255 ASAP1Q9ULH1 1129 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 NAALADL1Q9UQQ1 740 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 GDAQ9Y2T3 454 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 KDM3AQ9Y4C1 1321 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 TBC1D3DA0A087WVF3 549 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 TBC1D3IA0A087WXS9 549 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 TBC1D3EA0A087X179 549 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 TBC1D3KA0A087X1G2 549 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 TBC1D3BA6NDS4 549 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 TBC1D3FA6NER0 549 aaPredicted RBP2.86□□□□□ -1.95
CHD9-209ENST00000564255 FAM90A7PA6NKC0 464 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 FAM90A22PA8MWA6 464 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 FAM90A12PA8MX19 464 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 FAM90A23PA8MXZ1 464 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 TBC1D3LB9A6J9 549 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 H3BNC9 293 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 PSMD9O00233 223 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 PLSCR1O15162 318 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 GUCY1B2O75343 617 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 NDUFA10O95299 355 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 TBC1D3HP0C7X1 549 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 PSMA4P25789 261 aaKnown RBP2.86□□□□□ -1.95
CHD9-209ENST00000564255 DDX6P26196 483 aaKnown RBP eCLIP2.86□□□□□ -1.95
CHD9-209ENST00000564255 PCSK6P29122 969 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 EPHA8P29322 1005 aaPredicted RBP2.86□□□□□ -1.95
CHD9-209ENST00000564255 PGM1P36871 562 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 IGHMBP2P38935 993 aaKnown RBP2.86□□□□□ -1.95
CHD9-209ENST00000564255 GPD2P43304 727 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 RAD52P43351 418 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 DRG2P55039 364 aaKnown RBP2.86□□□□□ -1.95
CHD9-209ENST00000564255 CRHR2Q13324 411 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 BFSP2Q13515 415 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 CAMK1Q14012 370 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 CYP1B1Q16678 543 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 LRRC24Q50LG9 513 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 TREML2Q5T2D2 321 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 SNX30Q5VWJ9 437 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 KIAA0895LQ68EN5 471 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 ANKRD40Q6AI12 368 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 TBC1D3GQ6DHY5 549 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 TBC1D3CQ6IPX1 549 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 WDR93Q6P2C0 686 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 R3HCC1LQ7Z5L2 792 aaKnown RBP2.86□□□□□ -1.95
CHD9-209ENST00000564255 TBC1D3Q8IZP1 549 aaPredicted RBP2.86□□□□□ -1.95
CHD9-209ENST00000564255 NGEFQ8N5V2 710 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 USP44Q9H0E7 712 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 LMAN2LQ9H0V9 348 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 CDCP1Q9H5V8 836 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 STN1Q9H668 368 aaKnown RBP2.86□□□□□ -1.95
CHD9-209ENST00000564255 EHD3Q9NZN3 535 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 CEP72Q9P209 647 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 SEMA5BQ9P283 1151 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 SLC25A10Q9UBX3 287 aaPredicted RBP2.86□□□□□ -1.95
CHD9-209ENST00000564255 BAG5Q9UL15 447 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 FSD2A1L4K1 749 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 PRICKLE3O43900 615 aaPredicted RBP2.86□□□□□ -1.95
CHD9-209ENST00000564255 TMCC2O75069 709 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 PTP4A3O75365 173 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 NXPH3O95157 252 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 SPDEFO95238 335 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 PEX11BO96011 259 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 CREB1P16220 341 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 PCP4P48539 62 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 CLCN2P51788 898 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 TAS2R50P59544 299 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 TBL3Q12788 808 aaKnown RBP2.86□□□□□ -1.95
CHD9-209ENST00000564255 TP53BP2Q13625 1128 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 TBCCQ15814 346 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 SYNE3Q6ZMZ3 975 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 USP51Q70EK9 711 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 ARHGEF19Q8IW93 802 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 TMTC2Q8N394 836 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 ZNF366Q8N895 744 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 NFKBIDQ8NI38 313 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 STAMQ92783 540 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 NSUN4Q96CB9 384 aaKnown RBP2.86□□□□□ -1.95
CHD9-209ENST00000564255 PRR11Q96HE9 360 aaPredicted RBP2.86□□□□□ -1.95
CHD9-209ENST00000564255 RBM17Q96I25 401 aaKnown RBP2.86□□□□□ -1.95
CHD9-209ENST00000564255 KAZALD1Q96I82 304 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 TEPSINQ96N21 525 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 THAP7Q9BT49 309 aaPredicted RBP2.86□□□□□ -1.95
CHD9-209ENST00000564255 ALG8Q9BVK2 526 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms