RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 DCLK3Q9C098 648 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 RAB6CQ9H0N0 254 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 TASP1Q9H6P5 420 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 L2HGDHQ9H9P8 463 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 PRDM16Q9HAZ2 1276 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 EFR3BQ9Y2G0 817 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 MTCH2Q9Y6C9 303 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 GREB1Q4ZG55 1949 aa13.29□□□□□ -0.28
CLK3-214ENST00000564096 PI4K2BG5E9Z4 385 aa13.28□□□□□ -0.28
CLK3-214ENST00000564096 EEF2KO00418 725 aaKnown RBP13.28□□□□□ -0.28
CLK3-214ENST00000564096 TJP3O95049 919 aa13.28□□□□□ -0.28
CLK3-214ENST00000564096 LATS1O95835 1130 aa13.28□□□□□ -0.28
CLK3-214ENST00000564096 GLP2RO95838 553 aa13.28□□□□□ -0.28
CLK3-214ENST00000564096 HMBSP08397 361 aa13.28□□□□□ -0.28
CLK3-214ENST00000564096 ZFXP17010 805 aaPredicted RBP13.28□□□□□ -0.28
CLK3-214ENST00000564096 HDCP19113 662 aa13.28□□□□□ -0.28
CLK3-214ENST00000564096 KDELR1P24390 212 aa13.28□□□□□ -0.28
CLK3-214ENST00000564096 GTF2F1P35269 517 aaKnown RBP eCLIP13.28□□□□□ -0.28
CLK3-214ENST00000564096 TPI1P60174 286 aa13.28□□□□□ -0.28
CLK3-214ENST00000564096 SLC7A9P82251 487 aa13.28□□□□□ -0.28
CLK3-214ENST00000564096 RBM10P98175 930 aaKnown RBP13.28□□□□□ -0.28
CLK3-214ENST00000564096 EIF4EBP2Q13542 120 aaPredicted RBP13.28□□□□□ -0.28
CLK3-214ENST00000564096 DPYSL3Q14195 570 aa13.28□□□□□ -0.28
CLK3-214ENST00000564096 TEAD2Q15562 447 aa13.28□□□□□ -0.28
CLK3-214ENST00000564096 PRSS36Q5K4E3 855 aa13.28□□□□□ -0.28
CLK3-214ENST00000564096 GPR149Q86SP6 731 aa13.28□□□□□ -0.28
CLK3-214ENST00000564096 MAB21L3Q8N8X9 362 aa13.28□□□□□ -0.28
CLK3-214ENST00000564096 RAPGEF5Q92565 580 aa13.28□□□□□ -0.28
CLK3-214ENST00000564096 OSBPL8Q9BZF1 889 aa13.28□□□□□ -0.28
CLK3-214ENST00000564096 OSBPL2Q9H1P3 480 aa13.28□□□□□ -0.28
CLK3-214ENST00000564096 KIF9Q9HAQ2 790 aa13.28□□□□□ -0.28
CLK3-214ENST00000564096 PCDH18Q9HCL0 1135 aa13.28□□□□□ -0.28
CLK3-214ENST00000564096 GPATCH2LQ9NWQ4 482 aa13.28□□□□□ -0.28
CLK3-214ENST00000564096 ARHGAP26Q9UNA1 814 aa13.28□□□□□ -0.28
CLK3-214ENST00000564096 CPQQ9Y646 472 aa13.28□□□□□ -0.28
CLK3-214ENST00000564096 ATG2AQ2TAZ0 1938 aa13.28□□□□□ -0.28
CLK3-214ENST00000564096 hCG_1818297A0A087WSY0 165 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 CTAGE15A4D2H0 777 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 KCNU1A8MYU2 1149 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 ZNF185O15231 689 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 DAPK3O43293 454 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 CREB3O43889 395 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 PAGE1O75459 146 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 CTAGE8P0CG41 777 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 FSHRP23945 695 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 L1CAMP32004 1257 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 CDKN2BP42772 138 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 NRG1Q02297 640 aaPredicted RBP13.27□□□□□ -0.29
CLK3-214ENST00000564096 SLC5A9Q2M3M2 681 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 ATP13A4Q4VNC1 1196 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 GPR153Q6NV75 609 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 MFSD7Q6UXD7 560 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 LRRC31Q6UY01 552 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 CTAGE6Q86UF2 777 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 CHSY1Q86X52 802 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 SLC13A5Q86YT5 568 aaPredicted RBP13.27□□□□□ -0.29
CLK3-214ENST00000564096 RFX6Q8HWS3 928 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 CREG2Q8IUH2 290 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 CTAGE4Q8IX94 777 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 MICALL1Q8N3F8 863 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 C12orf76Q8N812 135 aaPredicted RBP13.27□□□□□ -0.29
CLK3-214ENST00000564096 ARL14EPQ8N8R7 260 aaPredicted RBP13.27□□□□□ -0.29
CLK3-214ENST00000564096 FAM71BQ8TC56 605 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 TBC1D31Q96DN5 1066 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 RIPOR3Q96MK2 946 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 KCTD15Q96SI1 283 aaPredicted RBP13.27□□□□□ -0.29
CLK3-214ENST00000564096 SMPD4Q9NXE4 827 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 CLDND1Q9NY35 253 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 DONSONQ9NYP3 566 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 STIM2Q9P246 746 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 ZNF510Q9Y2H8 683 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 SH3BP1Q9Y3L3 701 aa13.27□□□□□ -0.29
CLK3-214ENST00000564096 TYW5A2RUC4 315 aaKnown RBP13.26□□□□□ -0.29
CLK3-214ENST00000564096 C3orf70A6NLC5 250 aaPredicted RBP13.26□□□□□ -0.29
CLK3-214ENST00000564096 F5H5T6 163 aa13.26□□□□□ -0.29
CLK3-214ENST00000564096 CCDC188H7C350 402 aa13.26□□□□□ -0.29
CLK3-214ENST00000564096 KRIT1O00522 736 aa13.26□□□□□ -0.29
CLK3-214ENST00000564096 SOX1O00570 391 aaPredicted RBP13.26□□□□□ -0.29
CLK3-214ENST00000564096 APOL1O14791 398 aa13.26□□□□□ -0.29
CLK3-214ENST00000564096 FGF10O15520 208 aaPredicted RBP13.26□□□□□ -0.29
CLK3-214ENST00000564096 LINC01565O15544 149 aa13.26□□□□□ -0.29
CLK3-214ENST00000564096 STC2O76061 302 aa13.26□□□□□ -0.29
CLK3-214ENST00000564096 IRF1P10914 325 aa13.26□□□□□ -0.29
CLK3-214ENST00000564096 GJA1P17302 382 aa13.26□□□□□ -0.29
CLK3-214ENST00000564096 CEBPBP17676 345 aa13.26□□□□□ -0.29
CLK3-214ENST00000564096 CORO1AP31146 461 aaKnown RBP13.26□□□□□ -0.29
CLK3-214ENST00000564096 SERPINB6P35237 376 aa13.26□□□□□ -0.29
CLK3-214ENST00000564096 CCR2P41597 374 aa13.26□□□□□ -0.29
CLK3-214ENST00000564096 RANBP2P49792 3224 aaKnown RBP13.26□□□□□ -0.29
CLK3-214ENST00000564096 ARSEP51690 589 aa13.26□□□□□ -0.29
CLK3-214ENST00000564096 ADAM15Q13444 863 aa13.26□□□□□ -0.29
CLK3-214ENST00000564096 CA9Q16790 459 aa13.26□□□□□ -0.29
CLK3-214ENST00000564096 ATAT1Q5SQI0 421 aa13.26□□□□□ -0.29
CLK3-214ENST00000564096 KAZNQ674X7 775 aa13.26□□□□□ -0.29
CLK3-214ENST00000564096 EP400NLQ6ZTU2 488 aa13.26□□□□□ -0.29
CLK3-214ENST00000564096 RFX8Q6ZV50 586 aa13.26□□□□□ -0.29
CLK3-214ENST00000564096 GET4Q7L5D6 327 aaPredicted RBP13.26□□□□□ -0.29
CLK3-214ENST00000564096 ZNF572Q7Z3I7 529 aaPredicted RBP13.26□□□□□ -0.29
CLK3-214ENST00000564096 CMTM8Q8IZV2 173 aa13.26□□□□□ -0.29
CLK3-214ENST00000564096 TTC13Q8NBP0 860 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms