RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 SARGQ9BW04 601 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 TEX12Q9BXU0 123 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 FRMD8P1Q9BZ68 369 aaPredicted RBP6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 EHD4Q9H223 541 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 GGNBP2Q9H3C7 697 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 IPO11Q9UI26 975 aaKnown RBP6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 SMG5Q9UPR3 1016 aaKnown RBP6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 SNX14Q9Y5W7 946 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 PIAS3Q9Y6X2 628 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 TECPR2O15040 1411 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 C1orf167Q5SNV9 1468 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 KPNA4O00629 521 aaPredicted RBP6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 ZBTB24O43167 697 aaPredicted RBP6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 ARHGAP6O43182 974 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 SRGAP2O75044 1071 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 TRIM3O75382 744 aaPredicted RBP6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 PFKMP08237 780 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 SRGAP2BP0DMP2 458 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 HDCP19113 662 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 HTR7P34969 479 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 HIRAP54198 1017 aaPredicted RBP6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 PDE1AP54750 535 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 RPL10AP62906 217 aaKnown RBP6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 GCNT1Q02742 428 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 C16orf72Q14CZ0 275 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 SSX2Q16385 188 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 DPYSL2Q16555 572 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 ZNF674Q2M3X9 581 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 C6orf10Q5SRN2 563 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 STXBP5Q5T5C0 1151 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 ARMCX5Q6P1M9 558 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 LRIG3Q6UXM1 1119 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 NET1Q7Z628 596 aaPredicted RBP6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 EFHBQ8N7U6 833 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 GPR156Q8NFN8 814 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 PNPT1Q8TCS8 783 aaKnown RBP6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 MCOLN3Q8TDD5 553 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 MTFMTQ96DP5 389 aaKnown RBP6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 SEC16BQ96JE7 1060 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 VCPIP1Q96JH7 1222 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 NSMCE2Q96MF7 247 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 ZNF285Q96NJ3 590 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 SLC4A5Q9BY07 1137 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 RNPEPL1Q9HAU8 725 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 UXTQ9UBK9 157 aaPredicted RBP6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 WARS2Q9UGM6 360 aaKnown RBP6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 CDC23Q9UJX2 597 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 GPSM3Q9Y4H4 160 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 FLT1P17948 1338 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 PASKQ96RG2 1323 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 ARHGEF10O15013 1369 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 A0A1W2PRG6 482 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 FANCGO15287 622 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 PI15O43692 258 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 SORBS3O60504 671 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 GNAI2P04899 355 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 CPB1P15086 417 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 PRKCAP17252 672 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 HLA-DPA1P20036 260 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 MAP4P27816 1152 aaKnown RBP6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 PSMA5P28066 241 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 GARSP41250 739 aaKnown RBP6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 NUP107P57740 925 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 CCZ1BP86790 482 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 CCZ1P86791 482 aaPredicted RBP6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 PRKCQQ04759 706 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 ZNF211Q13398 564 aaPredicted RBP6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 SNX17Q15036 470 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 THEM4Q5T1C6 240 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 FAM102BQ5T8I3 360 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 SCYL2Q6P3W7 929 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 ISLR2Q6UXK2 745 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 BRINP3Q76B58 766 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 MICU3Q86XE3 530 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 OR8H3Q8N146 312 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 LRRC20Q8TCA0 184 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 GATA6Q92908 595 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 BORCS5Q969J3 196 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 ZNF669Q96BR6 464 aaPredicted RBP6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 FAR2Q96K12 515 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 FBXL18Q96ME1 805 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 SLC2A13Q96QE2 648 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 VSX1Q9NZR4 365 aaPredicted RBP6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 NYAP2Q9P242 653 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 ADAMTS1Q9UHI8 967 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 CRYL1Q9Y2S2 319 aa6.1□□□□□ -1.43
TUBGCP4-207ENST00000563963 LOC100506127A0A0U1RQW1 187 aa6.09□□□□□ -1.43
TUBGCP4-207ENST00000563963 PRR23AA6NEV1 266 aa6.09□□□□□ -1.43
TUBGCP4-207ENST00000563963 FAM25AB3EWG3 89 aa6.09□□□□□ -1.43
TUBGCP4-207ENST00000563963 FAM25CB3EWG5 89 aa6.09□□□□□ -1.43
TUBGCP4-207ENST00000563963 FAM25GB3EWG6 89 aa6.09□□□□□ -1.43
TUBGCP4-207ENST00000563963 TRAF5O00463 557 aa6.09□□□□□ -1.43
TUBGCP4-207ENST00000563963 RAB3DO95716 219 aa6.09□□□□□ -1.43
TUBGCP4-207ENST00000563963 PCSK2P16519 638 aa6.09□□□□□ -1.43
TUBGCP4-207ENST00000563963 CYP3A5P20815 502 aa6.09□□□□□ -1.43
TUBGCP4-207ENST00000563963 PTBP1P26599 531 aaKnown RBP eCLIP6.09□□□□□ -1.43
TUBGCP4-207ENST00000563963 G0S2P27469 103 aa6.09□□□□□ -1.43
TUBGCP4-207ENST00000563963 HOXA6P31267 233 aa6.09□□□□□ -1.43
TUBGCP4-207ENST00000563963 SLC7A2P52569 658 aa6.09□□□□□ -1.43
TUBGCP4-207ENST00000563963 SPARCL1Q14515 664 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms