RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 SGSHP51688 502 aa18.42■□□□□ 0.54
NME3-205ENST00000563854 TBX4P57082 545 aa18.42■□□□□ 0.54
NME3-205ENST00000563854 APBA1Q02410 837 aa18.42■□□□□ 0.54
NME3-205ENST00000563854 ZNF234Q14588 700 aa18.42■□□□□ 0.54
NME3-205ENST00000563854 FUT11Q495W5 492 aa18.42■□□□□ 0.54
NME3-205ENST00000563854 TRIM61Q5EBN2 209 aa18.42■□□□□ 0.54
NME3-205ENST00000563854 RFWD3Q6PCD5 774 aa18.42■□□□□ 0.54
NME3-205ENST00000563854 TRIM65Q6PJ69 517 aa18.42■□□□□ 0.54
NME3-205ENST00000563854 SCUBE3Q8IX30 993 aa18.42■□□□□ 0.54
NME3-205ENST00000563854 TMA16Q96EY4 203 aaKnown RBP18.42■□□□□ 0.54
NME3-205ENST00000563854 PIWIL1Q96J94 861 aaKnown RBP18.42■□□□□ 0.54
NME3-205ENST00000563854 MRGPRX1Q96LB2 322 aa18.42■□□□□ 0.54
NME3-205ENST00000563854 CD248Q9HCU0 757 aa18.42■□□□□ 0.54
NME3-205ENST00000563854 ACP6Q9NPH0 428 aa18.42■□□□□ 0.54
NME3-205ENST00000563854 ELOVL2Q9NXB9 296 aa18.42■□□□□ 0.54
NME3-205ENST00000563854 PLXND1Q9Y4D7 1925 aa18.41■□□□□ 0.54
NME3-205ENST00000563854 GOLGA6L7A0A1B0GV03 622 aa18.41■□□□□ 0.54
NME3-205ENST00000563854 SLC9A1P19634 815 aa18.41■□□□□ 0.54
NME3-205ENST00000563854 SLC11A2P49281 568 aa18.41■□□□□ 0.54
NME3-205ENST00000563854 IRX4P78413 519 aa18.41■□□□□ 0.54
NME3-205ENST00000563854 ADGRF1Q5T601 910 aa18.41■□□□□ 0.54
NME3-205ENST00000563854 SERPINA13PQ6UXR4 307 aa18.41■□□□□ 0.54
NME3-205ENST00000563854 GBP6Q6ZN66 633 aa18.41■□□□□ 0.54
NME3-205ENST00000563854 SYT12Q8IV01 421 aa18.41■□□□□ 0.54
NME3-205ENST00000563854 ADAM32Q8TC27 787 aa18.41■□□□□ 0.54
NME3-205ENST00000563854 MED15Q96RN5 788 aa18.41■□□□□ 0.54
NME3-205ENST00000563854 NUSAP1Q9BXS6 441 aaKnown RBP18.41■□□□□ 0.54
NME3-205ENST00000563854 SLC2A11Q9BYW1 496 aa18.41■□□□□ 0.54
NME3-205ENST00000563854 CLSTN2Q9H4D0 955 aa18.41■□□□□ 0.54
NME3-205ENST00000563854 TMEM9BQ9NQ34 198 aa18.41■□□□□ 0.54
NME3-205ENST00000563854 TMEM74BQ9NUR3 256 aa18.41■□□□□ 0.54
NME3-205ENST00000563854 ABCB8Q9NUT2 735 aa18.41■□□□□ 0.54
NME3-205ENST00000563854 STIM2Q9P246 746 aa18.41■□□□□ 0.54
NME3-205ENST00000563854 THAP10Q9P2Z0 257 aaPredicted RBP18.41■□□□□ 0.54
NME3-205ENST00000563854 LAMA1P25391 3075 aa18.41■□□□□ 0.54
NME3-205ENST00000563854 SPTBN2O15020 2390 aa18.4■□□□□ 0.54
NME3-205ENST00000563854 CAPN9O14815 690 aa18.4■□□□□ 0.54
NME3-205ENST00000563854 NDUFS2O75306 463 aa18.4■□□□□ 0.54
NME3-205ENST00000563854 LATS1O95835 1130 aa18.4■□□□□ 0.54
NME3-205ENST00000563854 MOCS2O96007 188 aaPredicted RBP18.4■□□□□ 0.54
NME3-205ENST00000563854 ADRB1P08588 477 aa18.4■□□□□ 0.54
NME3-205ENST00000563854 PRKCHP24723 683 aa18.4■□□□□ 0.54
NME3-205ENST00000563854 GPD2P43304 727 aa18.4■□□□□ 0.54
NME3-205ENST00000563854 MAPK8P45983 427 aa18.4■□□□□ 0.54
NME3-205ENST00000563854 ZNF445P59923 1031 aa18.4■□□□□ 0.54
NME3-205ENST00000563854 EIF4HQ15056 248 aaKnown RBP18.4■□□□□ 0.54
NME3-205ENST00000563854 UAP1L1Q3KQV9 507 aa18.4■□□□□ 0.54
NME3-205ENST00000563854 DAB2IPQ5VWQ8 1189 aa18.4■□□□□ 0.54
NME3-205ENST00000563854 NUGGCQ68CJ6 796 aa18.4■□□□□ 0.54
NME3-205ENST00000563854 TMEM215Q68D42 235 aa18.4■□□□□ 0.54
NME3-205ENST00000563854 CHST9Q7L1S5 443 aa18.4■□□□□ 0.54
NME3-205ENST00000563854 ENOSF1Q7L5Y1 443 aa18.4■□□□□ 0.54
NME3-205ENST00000563854 UNC45BQ8IWX7 931 aa18.4■□□□□ 0.54
NME3-205ENST00000563854 MLKLQ8NB16 471 aa18.4■□□□□ 0.54
NME3-205ENST00000563854 DQX1Q8TE96 717 aaKnown RBP18.4■□□□□ 0.54
NME3-205ENST00000563854 HSPA12BQ96MM6 686 aa18.4■□□□□ 0.54
NME3-205ENST00000563854 PRDM16Q9HAZ2 1276 aa18.4■□□□□ 0.54
NME3-205ENST00000563854 FSCN3Q9NQT6 498 aa18.4■□□□□ 0.54
NME3-205ENST00000563854 CNTN6Q9UQ52 1028 aa18.4■□□□□ 0.54
NME3-205ENST00000563854 NAALADL1Q9UQQ1 740 aa18.4■□□□□ 0.54
NME3-205ENST00000563854 TNRC6BQ9UPQ9 1833 aaKnown RBP18.39■□□□□ 0.54
NME3-205ENST00000563854 E5RJQ4 531 aa18.39■□□□□ 0.53
NME3-205ENST00000563854 NPC1O15118 1278 aa18.39■□□□□ 0.53
NME3-205ENST00000563854 SART1O43290 800 aaKnown RBP18.39■□□□□ 0.53
NME3-205ENST00000563854 ACSL4O60488 711 aa18.39■□□□□ 0.53
NME3-205ENST00000563854 TBL1XO60907 577 aa18.39■□□□□ 0.53
NME3-205ENST00000563854 IGLV3-27P01718 113 aa18.39■□□□□ 0.53
NME3-205ENST00000563854 EPHX1P07099 455 aa18.39■□□□□ 0.53
NME3-205ENST00000563854 HLA-FP30511 346 aa18.39■□□□□ 0.53
NME3-205ENST00000563854 ACADSBP45954 432 aa18.39■□□□□ 0.53
NME3-205ENST00000563854 ZNF33AQ06730 810 aa18.39■□□□□ 0.53
NME3-205ENST00000563854 EXOC3L4Q17RC7 722 aa18.39■□□□□ 0.53
NME3-205ENST00000563854 FNDC3BQ53EP0 1204 aaKnown RBP18.39■□□□□ 0.53
NME3-205ENST00000563854 HSP90AA4PQ58FG1 418 aa18.39■□□□□ 0.53
NME3-205ENST00000563854 PSAPL1Q6NUJ1 521 aa18.39■□□□□ 0.53
NME3-205ENST00000563854 PASD1Q8IV76 773 aa18.39■□□□□ 0.53
NME3-205ENST00000563854 CYB5D2Q8WUJ1 264 aa18.39■□□□□ 0.53
NME3-205ENST00000563854 ZNF606Q8WXB4 792 aa18.39■□□□□ 0.53
NME3-205ENST00000563854 SERPINB11Q96P15 392 aa18.39■□□□□ 0.53
NME3-205ENST00000563854 APEX2Q9UBZ4 518 aa18.39■□□□□ 0.53
NME3-205ENST00000563854 GGA2Q9UJY4 613 aa18.39■□□□□ 0.53
NME3-205ENST00000563854 TM4SF5O14894 197 aa18.38■□□□□ 0.53
NME3-205ENST00000563854 HLA-EP13747 358 aa18.38■□□□□ 0.53
NME3-205ENST00000563854 SLC6A4P31645 630 aa18.38■□□□□ 0.53
NME3-205ENST00000563854 LMAN2Q12907 356 aa18.38■□□□□ 0.53
NME3-205ENST00000563854 E2F5Q15329 346 aa18.38■□□□□ 0.53
NME3-205ENST00000563854 DPCR1Q3MIW9 517 aa18.38■□□□□ 0.53
NME3-205ENST00000563854 SPDYCQ5MJ68 293 aa18.38■□□□□ 0.53
NME3-205ENST00000563854 TAC4Q86UU9 113 aa18.38■□□□□ 0.53
NME3-205ENST00000563854 IRF2BP1Q8IU81 584 aa18.38■□□□□ 0.53
NME3-205ENST00000563854 SLC41A1Q8IVJ1 513 aa18.38■□□□□ 0.53
NME3-205ENST00000563854 RGL4Q8IZJ4 473 aa18.38■□□□□ 0.53
NME3-205ENST00000563854 ZNF366Q8N895 744 aa18.38■□□□□ 0.53
NME3-205ENST00000563854 WFDC5Q8TCV5 224 aa18.38■□□□□ 0.53
NME3-205ENST00000563854 WFIKKN2Q8TEU8 576 aa18.38■□□□□ 0.53
NME3-205ENST00000563854 GTPBP2Q9BX10 602 aaKnown RBP18.38■□□□□ 0.53
NME3-205ENST00000563854 LSM14BQ9BX40 385 aaKnown RBP18.38■□□□□ 0.53
NME3-205ENST00000563854 MKRN2Q9H000 416 aaKnown RBP18.38■□□□□ 0.53
NME3-205ENST00000563854 EVLQ9UI08 416 aaPredicted RBP18.38■□□□□ 0.53
NME3-205ENST00000563854 CYTH4Q9UIA0 394 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms