RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 SKA1Q96BD8 255 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 TUBGCP5Q96RT8 1024 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 SRPK1Q96SB4 655 aaKnown RBP10.77□□□□□ -0.69
RNF40-204ENST00000563683 GPR20Q99678 358 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 GPAMQ9HCL2 828 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 C20orf96Q9NUD7 363 aaPredicted RBP10.77□□□□□ -0.69
RNF40-204ENST00000563683 GALNT8Q9NY28 637 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 CIDEBQ9UHD4 219 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 ITGA11Q9UKX5 1188 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 GMEB1Q9Y692 573 aa10.77□□□□□ -0.69
RNF40-204ENST00000563683 AHDC1Q5TGY3 1603 aaPredicted RBP10.76□□□□□ -0.69
RNF40-204ENST00000563683 PTPRJQ12913 1337 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 ALOX15BO15296 676 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 FAM200BP0CF97 657 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 ATXN3P54252 364 aaPredicted RBP10.76□□□□□ -0.69
RNF40-204ENST00000563683 BCAT1P54687 386 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 MAP3K7CLP57077 242 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 SV2CQ496J9 727 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 PLEKHG4Q58EX7 1191 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 GNASQ5JWF2 1037 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 RABGAP1LQ5R372 815 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 BTBD8Q5XKL5 378 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 FAM91A1Q658Y4 838 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 ACAD11Q709F0 780 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 C1orf127Q8N9H9 656 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 COLGALT1Q8NBJ5 622 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 CCDC97Q96F63 343 aaPredicted RBP10.76□□□□□ -0.69
RNF40-204ENST00000563683 SUDS3Q9H7L9 328 aaPredicted RBP10.76□□□□□ -0.69
RNF40-204ENST00000563683 BCAP29Q9UHQ4 241 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 WASF2Q9Y6W5 498 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 RRN3P2A6NIE6 340 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 TRUB2O95900 331 aaKnown RBP10.76□□□□□ -0.69
RNF40-204ENST00000563683 PABPC4LP0CB38 370 aaKnown RBP10.76□□□□□ -0.69
RNF40-204ENST00000563683 KLRC2P26717 231 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 CDKN2BP42772 138 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 MAGEA8P43361 318 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 RPL10AP62906 217 aaKnown RBP10.76□□□□□ -0.69
RNF40-204ENST00000563683 ADIGQ0VDE8 80 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 MAP1SQ66K74 1059 aaPredicted RBP10.76□□□□□ -0.69
RNF40-204ENST00000563683 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.76□□□□□ -0.69
RNF40-204ENST00000563683 OXNAD1Q96HP4 312 aaPredicted RBP10.76□□□□□ -0.69
RNF40-204ENST00000563683 SLC39A10Q9ULF5 831 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.76□□□□□ -0.69
RNF40-204ENST00000563683 SDR42E2A6NKP2 422 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 CYB561D2O14569 222 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 TNPO2O14787 897 aaKnown RBP10.76□□□□□ -0.69
RNF40-204ENST00000563683 B3GAT3O94766 335 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 NEK3P51956 506 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 ZNF143P52747 638 aaPredicted RBP10.76□□□□□ -0.69
RNF40-204ENST00000563683 SLC6A3Q01959 620 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 USP10Q14694 798 aaKnown RBP10.76□□□□□ -0.69
RNF40-204ENST00000563683 TAF1CQ15572 869 aaPredicted RBP10.76□□□□□ -0.69
RNF40-204ENST00000563683 DCAF4L1Q3SXM0 396 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 ACBD5Q5T8D3 534 aaPredicted RBP10.76□□□□□ -0.69
RNF40-204ENST00000563683 ANKRD22Q5VYY1 191 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 ITPRIPL1Q6GPH6 555 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 KBTBD2Q8IY47 623 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 ADGRF2Q8IZF7 708 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 NAT14Q8WUY8 206 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 MTBPQ96DY7 904 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 SGF29Q96ES7 293 aa10.76□□□□□ -0.69
RNF40-204ENST00000563683 NIFKQ9BYG3 293 aaKnown RBP10.76□□□□□ -0.69
RNF40-204ENST00000563683 FRMD8Q9BZ67 464 aaPredicted RBP10.76□□□□□ -0.69
RNF40-204ENST00000563683 C3orf70A6NLC5 250 aaPredicted RBP10.75□□□□□ -0.69
RNF40-204ENST00000563683 PDHXO00330 501 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 FCHO1O14526 889 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 PMM2O15305 246 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 USP2O75604 605 aaPredicted RBP10.75□□□□□ -0.69
RNF40-204ENST00000563683 TMCC1O94876 653 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 TSPY1Q01534 308 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 ITGA9Q13797 1035 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 PCSK7Q16549 785 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 DBN1Q16643 649 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 PRAMEF19Q5SWL8 479 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 SPOUT1Q5T280 376 aaKnown RBP10.75□□□□□ -0.69
RNF40-204ENST00000563683 PPP1R26Q5T8A7 1209 aaPredicted RBP10.75□□□□□ -0.69
RNF40-204ENST00000563683 DEFB106AQ8N104 65 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 THEM5Q8N1Q8 247 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 IPMKQ8NFU5 416 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 HASPINQ8TF76 798 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 DDX1Q92499 740 aaKnown RBP10.75□□□□□ -0.69
RNF40-204ENST00000563683 EDEM1Q92611 657 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 VPS39Q96JC1 886 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 RNF157Q96PX1 679 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 SNRNP25Q9BV90 132 aaKnown RBP10.75□□□□□ -0.69
RNF40-204ENST00000563683 PHACTR1Q9C0D0 580 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 TASP1Q9H6P5 420 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 DNAAF2Q9NVR5 837 aaKnown RBP10.75□□□□□ -0.69
RNF40-204ENST00000563683 IPO11Q9UI26 975 aaKnown RBP10.75□□□□□ -0.69
RNF40-204ENST00000563683 MID2Q9UJV3 735 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 CPSF3Q9UKF6 684 aaKnown RBP10.75□□□□□ -0.69
RNF40-204ENST00000563683 KAT6AQ92794 2004 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 TTLL13PA6NNM8 815 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 TRPA1O75762 1119 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 RECQL4O94761 1208 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 YY1P25490 414 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 BST2Q10589 180 aaKnown RBP10.75□□□□□ -0.69
RNF40-204ENST00000563683 KLF1Q13351 362 aaPredicted RBP10.75□□□□□ -0.69
RNF40-204ENST00000563683 HIC1Q14526 733 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 TBCCQ15814 346 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms