RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 SEMA3BQ13214 749 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 TEX35Q5T0J7 233 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 ZNF697Q5TEC3 545 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 FAM72AQ5TYM5 149 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 FAM72DQ6L9T8 149 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 FAM72BQ86X60 149 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 KLHL7Q8IXQ5 586 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 PQLC3Q8N755 202 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 VN1R2Q8NFZ6 395 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 PCDH19Q8TAB3 1148 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 MAIP1Q8WWC4 291 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 MRPL38Q96DV4 380 aaKnown RBP10.53□□□□□ -0.72
SMG1-208ENST00000563448 TMEM51Q9NW97 253 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 XPO7Q9UIA9 1087 aaKnown RBP10.53□□□□□ -0.72
SMG1-208ENST00000563448 R3HDM2Q9Y2K5 976 aaKnown RBP10.53□□□□□ -0.72
SMG1-208ENST00000563448 TRANK1O15050 2925 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 CREB3O43889 395 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 CST8O60676 142 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 PHF2O75151 1096 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 OLFM2O95897 454 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 GGCXP38435 758 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 CCR2P41597 374 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 EPHA5P54756 1037 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 DYNLT1P63172 113 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 CYP1B1Q16678 543 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 ERCC6LQ2NKX8 1250 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 ARTNQ5T4W7 220 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 TXNDC8Q6A555 127 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 BBS12Q6ZW61 710 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 C12orf50Q8NA57 414 aaPredicted RBP10.53□□□□□ -0.72
SMG1-208ENST00000563448 C1orf54Q8WWF1 131 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 CSPG4P5Q96PW8 444 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 SLC22A12Q96S37 553 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 HAPLN3Q96S86 360 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 CYP2S1Q96SQ9 504 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 KRT12Q99456 494 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 KLF16Q9BXK1 252 aaPredicted RBP10.53□□□□□ -0.72
SMG1-208ENST00000563448 MAK16Q9BXY0 300 aaKnown RBP10.53□□□□□ -0.72
SMG1-208ENST00000563448 DDX47Q9H0S4 455 aaKnown RBP10.53□□□□□ -0.72
SMG1-208ENST00000563448 OSBPL2Q9H1P3 480 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 ZNF576Q9H609 170 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 ASAH2Q9NR71 780 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 ZDHHC7Q9NXF8 308 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 HBS1LQ9Y450 684 aaKnown RBP10.53□□□□□ -0.72
SMG1-208ENST00000563448 MYOFQ9NZM1 2061 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 RANBP2P49792 3224 aaKnown RBP10.53□□□□□ -0.72
SMG1-208ENST00000563448 GOLGA6L10A0A0M3HER8 536 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 CCDC195A0A1B0GUA6 201 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 A0A1W2PRU2 124 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 EEF2KO00418 725 aaKnown RBP10.52□□□□□ -0.73
SMG1-208ENST00000563448 MOSPD3O75425 235 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 MOCS2O96007 188 aaPredicted RBP10.52□□□□□ -0.73
SMG1-208ENST00000563448 SLC2A3P11169 496 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 GJA1P17302 382 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 AMPD1P23109 780 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 CDC25CP30307 473 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 ARL4AP40617 200 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 KCNQ1P51787 676 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 RING1Q06587 406 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 SLC9A4Q6AI14 798 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 TTC27Q6P3X3 843 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 ARL14EPQ8N8R7 260 aaPredicted RBP10.52□□□□□ -0.73
SMG1-208ENST00000563448 ZNF707Q96C28 371 aaPredicted RBP10.52□□□□□ -0.73
SMG1-208ENST00000563448 HAUS1Q96CS2 278 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 FAM118BQ9BPY3 351 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 LRRC1Q9BTT6 524 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 PRKD2Q9BZL6 878 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 DCLK3Q9C098 648 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 NACA2Q9H009 215 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 SIK2Q9H0K1 926 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 EPC1Q9H2F5 836 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 ATXN3LQ9H3M9 355 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 LRRC19Q9H756 370 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 TRPC7Q9HCX4 862 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 RCOR3Q9P2K3 495 aaPredicted RBP10.52□□□□□ -0.73
SMG1-208ENST00000563448 OR12D3Q9UGF7 316 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 DPP7Q9UHL4 492 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 HS3ST4Q9Y661 456 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 DENND4AQ7Z401 1863 aa10.52□□□□□ -0.73
SMG1-208ENST00000563448 H3BRJ5 948 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 APOEP02649 317 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 POU2F2P09086 479 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 HCAR3P49019 387 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 KPNA1P52294 538 aaPredicted RBP10.51□□□□□ -0.73
SMG1-208ENST00000563448 MRPS25P82663 173 aaKnown RBP10.51□□□□□ -0.73
SMG1-208ENST00000563448 DPYSQ14117 519 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 LRIT3Q3SXY7 679 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 STXBP5Q5T5C0 1151 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 PIK3R6Q5UE93 754 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 NPNTQ6UXI9 565 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 RFX8Q6ZV50 586 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 PLD5Q8N7P1 536 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 C12orf76Q8N812 135 aaPredicted RBP10.51□□□□□ -0.73
SMG1-208ENST00000563448 ATP6V0D2Q8N8Y2 350 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 SHKBP1Q8TBC3 707 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 ATG4AQ8WYN0 398 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 MRPS31Q92665 395 aaKnown RBP10.51□□□□□ -0.73
SMG1-208ENST00000563448 WBP2Q969T9 261 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 MAGOHBQ96A72 148 aaKnown RBP10.51□□□□□ -0.73
SMG1-208ENST00000563448 TCEAL4Q96EI5 215 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms