RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 TSGA10Q9BZW7 698 aa19.54■□□□□ 0.72
RAB40C-207ENST00000563109 OSGEPQ9NPF4 335 aa19.54■□□□□ 0.72
RAB40C-207ENST00000563109 CALCOCO1Q9P1Z2 691 aa19.54■□□□□ 0.72
RAB40C-207ENST00000563109 AGO1Q9UL18 857 aaKnown RBP19.54■□□□□ 0.72
RAB40C-207ENST00000563109 BTNL10A8MVZ5 291 aa19.53■□□□□ 0.72
RAB40C-207ENST00000563109 PJA2O43164 708 aa19.53■□□□□ 0.72
RAB40C-207ENST00000563109 ACSL4O60488 711 aa19.53■□□□□ 0.72
RAB40C-207ENST00000563109 GREM1O60565 184 aa19.53■□□□□ 0.72
RAB40C-207ENST00000563109 SRFP11831 508 aa19.53■□□□□ 0.72
RAB40C-207ENST00000563109 ARHGAP25P42331 645 aa19.53■□□□□ 0.72
RAB40C-207ENST00000563109 ATXN1P54253 815 aaKnown RBP19.53■□□□□ 0.72
RAB40C-207ENST00000563109 HDAC4P56524 1084 aa19.53■□□□□ 0.72
RAB40C-207ENST00000563109 PFKPQ01813 784 aa19.53■□□□□ 0.72
RAB40C-207ENST00000563109 ZNF252P-AS1Q0IIN9 211 aa19.53■□□□□ 0.72
RAB40C-207ENST00000563109 SH3PXD2AQ5TCZ1 1133 aa19.53■□□□□ 0.72
RAB40C-207ENST00000563109 SCYL2Q6P3W7 929 aa19.53■□□□□ 0.72
RAB40C-207ENST00000563109 CPA6Q8N4T0 437 aa19.53■□□□□ 0.72
RAB40C-207ENST00000563109 NIPA2Q8N8Q9 360 aa19.53■□□□□ 0.72
RAB40C-207ENST00000563109 CSGALNACT1Q8TDX6 532 aa19.53■□□□□ 0.72
RAB40C-207ENST00000563109 AZIN2Q96A70 460 aa19.53■□□□□ 0.72
RAB40C-207ENST00000563109 ZFYVE19Q96K21 471 aa19.53■□□□□ 0.72
RAB40C-207ENST00000563109 BTBD6Q96KE9 485 aa19.53■□□□□ 0.72
RAB40C-207ENST00000563109 NECAB3Q96P71 396 aaPredicted RBP19.53■□□□□ 0.72
RAB40C-207ENST00000563109 TKTL2Q9H0I9 626 aa19.53■□□□□ 0.72
RAB40C-207ENST00000563109 TFR2Q9UP52 801 aa19.53■□□□□ 0.72
RAB40C-207ENST00000563109 C5orf42Q9H799 3197 aa19.53■□□□□ 0.72
RAB40C-207ENST00000563109 TICRRQ7Z2Z1 1910 aa19.53■□□□□ 0.72
RAB40C-207ENST00000563109 TMEM110-MUSTN1A8MSY1 372 aa19.52■□□□□ 0.72
RAB40C-207ENST00000563109 KCNU1A8MYU2 1149 aa19.52■□□□□ 0.72
RAB40C-207ENST00000563109 KLKB1P03952 638 aa19.52■□□□□ 0.72
RAB40C-207ENST00000563109 CHKAP35790 457 aa19.52■□□□□ 0.72
RAB40C-207ENST00000563109 HADHBP55084 474 aaKnown RBP19.52■□□□□ 0.72
RAB40C-207ENST00000563109 NAP1L1P55209 391 aaKnown RBP19.52■□□□□ 0.72
RAB40C-207ENST00000563109 MESDQ14696 234 aa19.52■□□□□ 0.72
RAB40C-207ENST00000563109 IFI16Q16666 785 aaKnown RBP19.52■□□□□ 0.72
RAB40C-207ENST00000563109 DNASE1L2Q92874 299 aa19.52■□□□□ 0.72
RAB40C-207ENST00000563109 ASIC4Q96FT7 647 aa19.52■□□□□ 0.72
RAB40C-207ENST00000563109 ZNF830Q96NB3 372 aaPredicted RBP19.52■□□□□ 0.72
RAB40C-207ENST00000563109 KCNF1Q9H3M0 494 aa19.52■□□□□ 0.72
RAB40C-207ENST00000563109 ARHGEF38Q9NXL2 777 aa19.52■□□□□ 0.72
RAB40C-207ENST00000563109 DUSP12Q9UNI6 340 aa19.52■□□□□ 0.72
RAB40C-207ENST00000563109 RCCD1A6NED2 376 aa19.51■□□□□ 0.71
RAB40C-207ENST00000563109 KRT86O43790 486 aa19.51■□□□□ 0.71
RAB40C-207ENST00000563109 PRPSAP2O60256 369 aa19.51■□□□□ 0.71
RAB40C-207ENST00000563109 PROSCO94903 275 aa19.51■□□□□ 0.71
RAB40C-207ENST00000563109 ADH1CP00326 375 aa19.51■□□□□ 0.71
RAB40C-207ENST00000563109 MAN1A1P33908 653 aa19.51■□□□□ 0.71
RAB40C-207ENST00000563109 SSR1P43307 286 aaKnown RBP19.51■□□□□ 0.71
RAB40C-207ENST00000563109 AIF1P55008 147 aa19.51■□□□□ 0.71
RAB40C-207ENST00000563109 NR1H3Q13133 447 aa19.51■□□□□ 0.71
RAB40C-207ENST00000563109 EML3Q32P44 896 aa19.51■□□□□ 0.71
RAB40C-207ENST00000563109 ADGRF1Q5T601 910 aa19.51■□□□□ 0.71
RAB40C-207ENST00000563109 ACBD5Q5T8D3 534 aaPredicted RBP19.51■□□□□ 0.71
RAB40C-207ENST00000563109 TRIM68Q6AZZ1 485 aa19.51■□□□□ 0.71
RAB40C-207ENST00000563109 CHSY1Q86X52 802 aa19.51■□□□□ 0.71
RAB40C-207ENST00000563109 FAM83CQ9BQN1 747 aa19.51■□□□□ 0.71
RAB40C-207ENST00000563109 EBF3Q9H4W6 596 aa19.51■□□□□ 0.71
RAB40C-207ENST00000563109 STOML2Q9UJZ1 356 aa19.51■□□□□ 0.71
RAB40C-207ENST00000563109 TYW5A2RUC4 315 aaKnown RBP19.5■□□□□ 0.71
RAB40C-207ENST00000563109 PAGE1O75459 146 aa19.5■□□□□ 0.71
RAB40C-207ENST00000563109 CYBBP04839 570 aa19.5■□□□□ 0.71
RAB40C-207ENST00000563109 ARSAP15289 507 aa19.5■□□□□ 0.71
RAB40C-207ENST00000563109 PCK1P35558 622 aa19.5■□□□□ 0.71
RAB40C-207ENST00000563109 RUNX3Q13761 415 aa19.5■□□□□ 0.71
RAB40C-207ENST00000563109 RAB6CQ53S08 254 aa19.5■□□□□ 0.71
RAB40C-207ENST00000563109 EFHC2Q5JST6 749 aa19.5■□□□□ 0.71
RAB40C-207ENST00000563109 FAM217AQ8IXS0 508 aa19.5■□□□□ 0.71
RAB40C-207ENST00000563109 UBALD2Q8IYN6 164 aa19.5■□□□□ 0.71
RAB40C-207ENST00000563109 CPXM2Q8N436 756 aa19.5■□□□□ 0.71
RAB40C-207ENST00000563109 NTAN1Q96AB6 310 aa19.5■□□□□ 0.71
RAB40C-207ENST00000563109 LACRTQ9GZZ8 138 aa19.5■□□□□ 0.71
RAB40C-207ENST00000563109 RAB6CQ9H0N0 254 aa19.5■□□□□ 0.71
RAB40C-207ENST00000563109 LINC00597Q9H2U6 94 aa19.5■□□□□ 0.71
RAB40C-207ENST00000563109 SLC2A4RGQ9NR83 387 aa19.5■□□□□ 0.71
RAB40C-207ENST00000563109 MYO10Q9HD67 2058 aa19.5■□□□□ 0.71
RAB40C-207ENST00000563109 COL4A2P08572 1712 aa19.49■□□□□ 0.71
RAB40C-207ENST00000563109 F5H5T6 163 aa19.49■□□□□ 0.71
RAB40C-207ENST00000563109 NARSO43776 548 aaKnown RBP19.49■□□□□ 0.71
RAB40C-207ENST00000563109 LRCH4O75427 683 aa19.49■□□□□ 0.71
RAB40C-207ENST00000563109 CYP17A1P05093 508 aa19.49■□□□□ 0.71
RAB40C-207ENST00000563109 MIPP30301 263 aa19.49■□□□□ 0.71
RAB40C-207ENST00000563109 VCPP55072 806 aaKnown RBP19.49■□□□□ 0.71
RAB40C-207ENST00000563109 TNK2Q07912 1038 aa19.49■□□□□ 0.71
RAB40C-207ENST00000563109 HADHQ16836 314 aaKnown RBP19.49■□□□□ 0.71
RAB40C-207ENST00000563109 ITPRIPL2Q3MIP1 535 aa19.49■□□□□ 0.71
RAB40C-207ENST00000563109 RAP1GAP2Q684P5 730 aa19.49■□□□□ 0.71
RAB40C-207ENST00000563109 SLFN11Q7Z7L1 901 aa19.49■□□□□ 0.71
RAB40C-207ENST00000563109 CCDC185Q8N715 623 aa19.49■□□□□ 0.71
RAB40C-207ENST00000563109 HAPLN3Q96S86 360 aa19.49■□□□□ 0.71
RAB40C-207ENST00000563109 IRX2Q9BZI1 471 aaPredicted RBP19.49■□□□□ 0.71
RAB40C-207ENST00000563109 ECT2Q9H8V3 914 aa19.49■□□□□ 0.71
RAB40C-207ENST00000563109 TRPV5Q9NQA5 729 aa19.49■□□□□ 0.71
RAB40C-207ENST00000563109 HPS4Q9NQG7 708 aa19.49■□□□□ 0.71
RAB40C-207ENST00000563109 SPHK2Q9NRA0 654 aa19.49■□□□□ 0.71
RAB40C-207ENST00000563109 PCSK1NQ9UHG2 260 aa19.49■□□□□ 0.71
RAB40C-207ENST00000563109 XPO7Q9UIA9 1087 aaKnown RBP19.49■□□□□ 0.71
RAB40C-207ENST00000563109 MUTYHQ9UIF7 546 aa19.49■□□□□ 0.71
RAB40C-207ENST00000563109 USP18Q9UMW8 372 aa19.49■□□□□ 0.71
RAB40C-207ENST00000563109 PPP2R2CQ9Y2T4 447 aa19.49■□□□□ 0.71
RAB40C-207ENST00000563109 MACROD2A1Z1Q3 448 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms