RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 CHKAP35790 457 aa17.27■□□□□ 0.36
CDT1-202ENST00000562747 PLK5Q496M5 336 aa17.27■□□□□ 0.36
CDT1-202ENST00000562747 FBXO43Q4G163 708 aa17.27■□□□□ 0.36
CDT1-202ENST00000562747 RPLP0P6Q8NHW5 317 aa17.27■□□□□ 0.36
CDT1-202ENST00000562747 IPO4Q8TEX9 1081 aaKnown RBP17.27■□□□□ 0.36
CDT1-202ENST00000562747 ZC3H10Q96K80 434 aaKnown RBP17.27■□□□□ 0.36
CDT1-202ENST00000562747 DUSP15Q9H1R2 295 aaPredicted RBP17.27■□□□□ 0.36
CDT1-202ENST00000562747 POPDC2Q9HBU9 364 aa17.27■□□□□ 0.36
CDT1-202ENST00000562747 ASNSD1Q9NWL6 643 aa17.27■□□□□ 0.36
CDT1-202ENST00000562747 SFMBT1Q9UHJ3 866 aa17.27■□□□□ 0.36
CDT1-202ENST00000562747 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.26■□□□□ 0.35
CDT1-202ENST00000562747 ATG13O75143 517 aa17.26■□□□□ 0.35
CDT1-202ENST00000562747 FYNP06241 537 aa17.26■□□□□ 0.35
CDT1-202ENST00000562747 HARS2P49590 506 aaKnown RBP17.26■□□□□ 0.35
CDT1-202ENST00000562747 YWHAZP63104 245 aaKnown RBP17.26■□□□□ 0.35
CDT1-202ENST00000562747 NNTQ13423 1086 aa17.26■□□□□ 0.35
CDT1-202ENST00000562747 PTPN20Q4JDL3 420 aa17.26■□□□□ 0.35
CDT1-202ENST00000562747 EFHC1Q5JVL4 640 aa17.26■□□□□ 0.35
CDT1-202ENST00000562747 TAF3Q5VWG9 929 aa17.26■□□□□ 0.35
CDT1-202ENST00000562747 TMEM25Q86YD3 366 aa17.26■□□□□ 0.35
CDT1-202ENST00000562747 ZDHHC17Q8IUH5 632 aa17.26■□□□□ 0.35
CDT1-202ENST00000562747 CAMKK1Q8N5S9 505 aa17.26■□□□□ 0.35
CDT1-202ENST00000562747 CCDC26Q8TAB7 109 aa17.26■□□□□ 0.35
CDT1-202ENST00000562747 NAP1L5Q96NT1 182 aaPredicted RBP17.26■□□□□ 0.35
CDT1-202ENST00000562747 MARK1Q9P0L2 795 aa17.26■□□□□ 0.35
CDT1-202ENST00000562747 WDR35Q9P2L0 1181 aa17.26■□□□□ 0.35
CDT1-202ENST00000562747 TJP2Q9UDY2 1190 aa17.26■□□□□ 0.35
CDT1-202ENST00000562747 NOCTQ9UK39 431 aaKnown RBP17.26■□□□□ 0.35
CDT1-202ENST00000562747 AGO1Q9UL18 857 aaKnown RBP17.26■□□□□ 0.35
CDT1-202ENST00000562747 PCDHGA5Q9Y5G8 931 aa17.26■□□□□ 0.35
CDT1-202ENST00000562747 FRYQ5TBA9 3013 aa17.26■□□□□ 0.35
CDT1-202ENST00000562747 LAMA1P25391 3075 aa17.26■□□□□ 0.35
CDT1-202ENST00000562747 ANTXRLA6NF34 631 aa17.25■□□□□ 0.35
CDT1-202ENST00000562747 CAPN9O14815 690 aa17.25■□□□□ 0.35
CDT1-202ENST00000562747 KCNK5O95279 499 aa17.25■□□□□ 0.35
CDT1-202ENST00000562747 LATS1O95835 1130 aa17.25■□□□□ 0.35
CDT1-202ENST00000562747 ERBB2P04626 1255 aa17.25■□□□□ 0.35
CDT1-202ENST00000562747 MMEP08473 750 aa17.25■□□□□ 0.35
CDT1-202ENST00000562747 GABRB2P47870 512 aa17.25■□□□□ 0.35
CDT1-202ENST00000562747 SHC2P98077 582 aa17.25■□□□□ 0.35
CDT1-202ENST00000562747 FANCCQ00597 558 aa17.25■□□□□ 0.35
CDT1-202ENST00000562747 CDR2Q01850 454 aa17.25■□□□□ 0.35
CDT1-202ENST00000562747 RING1Q06587 406 aa17.25■□□□□ 0.35
CDT1-202ENST00000562747 NR1I3Q14994 352 aa17.25■□□□□ 0.35
CDT1-202ENST00000562747 ANO4Q32M45 955 aa17.25■□□□□ 0.35
CDT1-202ENST00000562747 PREPLQ4J6C6 727 aaPredicted RBP17.25■□□□□ 0.35
CDT1-202ENST00000562747 TOGARAM2Q6ZUX3 1019 aa17.25■□□□□ 0.35
CDT1-202ENST00000562747 DENND1CQ8IV53 801 aa17.25■□□□□ 0.35
CDT1-202ENST00000562747 UNC45BQ8IWX7 931 aa17.25■□□□□ 0.35
CDT1-202ENST00000562747 ETFBKMTQ8IXQ9 262 aa17.25■□□□□ 0.35
CDT1-202ENST00000562747 CPXM2Q8N436 756 aa17.25■□□□□ 0.35
CDT1-202ENST00000562747 MSANTD4Q8NCY6 345 aa17.25■□□□□ 0.35
CDT1-202ENST00000562747 DQX1Q8TE96 717 aaKnown RBP17.25■□□□□ 0.35
CDT1-202ENST00000562747 SERPINB11Q96P15 392 aa17.25■□□□□ 0.35
CDT1-202ENST00000562747 PNKPQ96T60 521 aa17.25■□□□□ 0.35
CDT1-202ENST00000562747 SYNCQ9H7C4 482 aa17.25■□□□□ 0.35
CDT1-202ENST00000562747 MYO6Q9UM54 1294 aa17.25■□□□□ 0.35
CDT1-202ENST00000562747 NAALADL1Q9UQQ1 740 aa17.25■□□□□ 0.35
CDT1-202ENST00000562747 MSI1O43347 362 aaKnown RBP17.24■□□□□ 0.35
CDT1-202ENST00000562747 HSF2BPO75031 334 aa17.24■□□□□ 0.35
CDT1-202ENST00000562747 IGLV3-27P01718 113 aa17.24■□□□□ 0.35
CDT1-202ENST00000562747 CCDC172P0C7W6 258 aa17.24■□□□□ 0.35
CDT1-202ENST00000562747 NOMO3P69849 1222 aa17.24■□□□□ 0.35
CDT1-202ENST00000562747 DMC1Q14565 340 aa17.24■□□□□ 0.35
CDT1-202ENST00000562747 NUGGCQ68CJ6 796 aa17.24■□□□□ 0.35
CDT1-202ENST00000562747 OR6B2Q6IFH4 312 aa17.24■□□□□ 0.35
CDT1-202ENST00000562747 LRSAM1Q6UWE0 723 aa17.24■□□□□ 0.35
CDT1-202ENST00000562747 OLFML1Q6UWY5 402 aa17.24■□□□□ 0.35
CDT1-202ENST00000562747 TRIM72Q6ZMU5 477 aa17.24■□□□□ 0.35
CDT1-202ENST00000562747 TPGS1Q6ZTW0 290 aa17.24■□□□□ 0.35
CDT1-202ENST00000562747 FAM183BPQ6ZVS7 135 aa17.24■□□□□ 0.35
CDT1-202ENST00000562747 SYT13Q7L8C5 426 aa17.24■□□□□ 0.35
CDT1-202ENST00000562747 C12orf40Q86WS4 652 aa17.24■□□□□ 0.35
CDT1-202ENST00000562747 ERICH1Q86X53 443 aa17.24■□□□□ 0.35
CDT1-202ENST00000562747 FAM217AQ8IXS0 508 aa17.24■□□□□ 0.35
CDT1-202ENST00000562747 PIWIL1Q96J94 861 aaKnown RBP17.24■□□□□ 0.35
CDT1-202ENST00000562747 SLC2A13Q96QE2 648 aa17.24■□□□□ 0.35
CDT1-202ENST00000562747 XPO6Q96QU8 1125 aaKnown RBP17.24■□□□□ 0.35
CDT1-202ENST00000562747 BBS2Q9BXC9 721 aa17.24■□□□□ 0.35
CDT1-202ENST00000562747 VPS45Q9NRW7 570 aa17.24■□□□□ 0.35
CDT1-202ENST00000562747 STOML2Q9UJZ1 356 aa17.24■□□□□ 0.35
CDT1-202ENST00000562747 RALYQ9UKM9 306 aaKnown RBP17.24■□□□□ 0.35
CDT1-202ENST00000562747 NUP205Q92621 2012 aa17.24■□□□□ 0.35
CDT1-202ENST00000562747 MYOFQ9NZM1 2061 aa17.24■□□□□ 0.35
CDT1-202ENST00000562747 A0A0A0MRY4 1105 aa17.23■□□□□ 0.35
CDT1-202ENST00000562747 NEDD8-MDP1E9PL57 170 aa17.23■□□□□ 0.35
CDT1-202ENST00000562747 CACNG3O60359 315 aa17.23■□□□□ 0.35
CDT1-202ENST00000562747 CYP1A1P04798 512 aaPredicted RBP17.23■□□□□ 0.35
CDT1-202ENST00000562747 APODP05090 189 aa17.23■□□□□ 0.35
CDT1-202ENST00000562747 TYRP14679 529 aa17.23■□□□□ 0.35
CDT1-202ENST00000562747 FERP16591 822 aa17.23■□□□□ 0.35
CDT1-202ENST00000562747 SCNN1AP37088 669 aa17.23■□□□□ 0.35
CDT1-202ENST00000562747 SLC6A11P48066 632 aa17.23■□□□□ 0.35
CDT1-202ENST00000562747 TBX4P57082 545 aa17.23■□□□□ 0.35
CDT1-202ENST00000562747 ZNF445P59923 1031 aa17.23■□□□□ 0.35
CDT1-202ENST00000562747 FMO1Q01740 532 aa17.23■□□□□ 0.35
CDT1-202ENST00000562747 SLC6A3Q01959 620 aa17.23■□□□□ 0.35
CDT1-202ENST00000562747 SYPL2Q5VXT5 272 aa17.23■□□□□ 0.35
CDT1-202ENST00000562747 RNF43Q68DV7 783 aa17.23■□□□□ 0.35
CDT1-202ENST00000562747 SLC26A9Q7LBE3 791 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms