RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 HOMER1Q86YM7 354 aa6.4□□□□□ -1.38
TCF4-213ENST00000562543 ERC1Q8IUD2 1116 aa6.4□□□□□ -1.38
TCF4-213ENST00000562543 EID2Q8N6I1 236 aa6.4□□□□□ -1.38
TCF4-213ENST00000562543 MFSD2AQ8NA29 543 aa6.4□□□□□ -1.38
TCF4-213ENST00000562543 C9orf43Q8TAL5 461 aaPredicted RBP6.4□□□□□ -1.38
TCF4-213ENST00000562543 KCNN1Q92952 543 aa6.4□□□□□ -1.38
TCF4-213ENST00000562543 FAM167AQ96KS9 214 aa6.4□□□□□ -1.38
TCF4-213ENST00000562543 NXF3Q9H4D5 531 aaKnown RBP6.4□□□□□ -1.38
TCF4-213ENST00000562543 ZNF71Q9NQZ8 489 aaPredicted RBP6.4□□□□□ -1.38
TCF4-213ENST00000562543 WSB2Q9NYS7 404 aaPredicted RBP6.4□□□□□ -1.38
TCF4-213ENST00000562543 PRRC2CQ9Y520 2896 aaKnown RBP6.39□□□□□ -1.39
TCF4-213ENST00000562543 MXRA5Q9NR99 2828 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 IGKV6-21A0A0C4DH24 114 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 HEATR9A2RTY3 570 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 DDX39AO00148 427 aaKnown RBP6.39□□□□□ -1.39
TCF4-213ENST00000562543 VNN2O95498 520 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 FGF19O95750 216 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 CD99P14209 185 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 AKAP5P24588 427 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 KLRB1Q12918 225 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 BFSP1Q12934 665 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 PLD1Q13393 1074 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 MTF1Q14872 753 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 TGIF1Q15583 401 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 INF2Q27J81 1249 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 EGFLAMQ63HQ2 1017 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 MIS18BP1Q6P0N0 1132 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 LAYNQ6UX15 382 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 GDF7Q7Z4P5 450 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 DGKHQ86XP1 1220 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 RHPN2Q8IUC4 686 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 HPS3Q969F9 1004 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 GAL3ST3Q96A11 431 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 TOE1Q96GM8 510 aaKnown RBP6.39□□□□□ -1.39
TCF4-213ENST00000562543 NLRP4Q96MN2 994 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 PIGSQ96S52 555 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 GPR174Q9BXC1 333 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 KRTAP9-3Q9BYQ3 159 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 MINDY3Q9H8M7 445 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 AGO4Q9HCK5 861 aaKnown RBP6.39□□□□□ -1.39
TCF4-213ENST00000562543 TOMM22Q9NS69 142 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 DUS2Q9NX74 493 aaKnown RBP6.39□□□□□ -1.39
TCF4-213ENST00000562543 PARP2Q9UGN5 583 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 FBXL5Q9UKA1 691 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 PPM1HQ9ULR3 514 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 EXOC6BQ9Y2D4 811 aa6.39□□□□□ -1.39
TCF4-213ENST00000562543 PMS2P1A4D2B8 440 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 TCAF2A6NFQ2 919 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 PTGESO14684 152 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 RNF113AO15541 343 aaKnown RBP6.38□□□□□ -1.39
TCF4-213ENST00000562543 WNT1P04628 370 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 ITGAVP06756 1048 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 HOXB2P14652 356 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 CD1EP15812 388 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 SLC6A4P31645 630 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 KIF5BP33176 963 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 AVPR1AP37288 418 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 IFNAR2P48551 515 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 ZNF268Q14587 947 aaPredicted RBP6.38□□□□□ -1.39
TCF4-213ENST00000562543 SART3Q15020 963 aaKnown RBP6.38□□□□□ -1.39
TCF4-213ENST00000562543 TARBP2Q15633 366 aaKnown RBP6.38□□□□□ -1.39
TCF4-213ENST00000562543 ZNF77Q15935 545 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 SFMBT2Q5VUG0 894 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 THAP5Q7Z6K1 395 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 CREG2Q8IUH2 290 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 HID1Q8IV36 788 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 EFCAB13Q8IY85 973 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 KBTBD3Q8NAB2 608 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 NSUN7Q8NE18 718 aaKnown RBP6.38□□□□□ -1.39
TCF4-213ENST00000562543 BEST2Q8NFU1 509 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 PSMG2Q969U7 264 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 CCDC51Q96ER9 411 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 C20orf173Q96LM9 149 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 YTHDC1Q96MU7 727 aaKnown RBP6.38□□□□□ -1.39
TCF4-213ENST00000562543 MXRA8Q9BRK3 442 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 SGPP1Q9BX95 441 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 PTPRHQ9HD43 1115 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 TM9SF3Q9HD45 589 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 TDP1Q9NUW8 608 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 ZMYM5Q9UJ78 669 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 TMEM59LQ9UK28 342 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 TGP01266 2768 aa6.38□□□□□ -1.39
TCF4-213ENST00000562543 PLXNA2O75051 1894 aa6.37□□□□□ -1.39
TCF4-213ENST00000562543 KLRF2D3W0D1 207 aa6.37□□□□□ -1.39
TCF4-213ENST00000562543 I3L4J1 428 aa6.37□□□□□ -1.39
TCF4-213ENST00000562543 NUAK1O60285 661 aa6.37□□□□□ -1.39
TCF4-213ENST00000562543 KAT7O95251 611 aa6.37□□□□□ -1.39
TCF4-213ENST00000562543 CST3P01034 146 aaPredicted RBP6.37□□□□□ -1.39
TCF4-213ENST00000562543 RAC2P15153 192 aa6.37□□□□□ -1.39
TCF4-213ENST00000562543 ABCB4P21439 1286 aa6.37□□□□□ -1.39
TCF4-213ENST00000562543 EPHA8P29322 1005 aaPredicted RBP6.37□□□□□ -1.39
TCF4-213ENST00000562543 CDC25CP30307 473 aa6.37□□□□□ -1.39
TCF4-213ENST00000562543 BRCC3P46736 316 aa6.37□□□□□ -1.39
TCF4-213ENST00000562543 EPHB3P54753 998 aa6.37□□□□□ -1.39
TCF4-213ENST00000562543 HDAC4P56524 1084 aa6.37□□□□□ -1.39
TCF4-213ENST00000562543 MRPL58Q14197 206 aaKnown RBP6.37□□□□□ -1.39
TCF4-213ENST00000562543 EIF2S3LQ2VIR3 472 aaKnown RBP6.37□□□□□ -1.39
TCF4-213ENST00000562543 TRMT11Q7Z4G4 463 aaKnown RBP6.37□□□□□ -1.39
TCF4-213ENST00000562543 DNAJB7Q7Z6W7 309 aaPredicted RBP6.37□□□□□ -1.39
TCF4-213ENST00000562543 SGMS1Q86VZ5 419 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms