RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 RALGDSQ12967 914 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 DYNC1I2Q13409 638 aaKnown RBP5.72□□□□□ -1.49
CAPN3-211ENST00000562199 ORC1Q13415 861 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 SEMA5AQ13591 1074 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 NFIL3Q16649 462 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 ME3Q16798 604 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 TPD52L1Q16890 204 aaPredicted RBP5.72□□□□□ -1.49
CAPN3-211ENST00000562199 FSCBQ5H9T9 825 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 GKAP1Q5VSY0 366 aaPredicted RBP5.72□□□□□ -1.49
CAPN3-211ENST00000562199 JMJD6Q6NYC1 403 aaPredicted RBP5.72□□□□□ -1.49
CAPN3-211ENST00000562199 TAF2Q6P1X5 1199 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 INTS5Q6P9B9 1019 aaKnown RBP5.72□□□□□ -1.49
CAPN3-211ENST00000562199 PGM2L1Q6PCE3 622 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 TRIM65Q6PJ69 517 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 SLC2A7Q6PXP3 512 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 KDM7AQ6ZMT4 941 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 CATSPERGQ6ZRH7 1159 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 HDXQ7Z353 690 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 SLFN11Q7Z7L1 901 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 MTDHQ86UE4 582 aaKnown RBP5.72□□□□□ -1.49
CAPN3-211ENST00000562199 TMEM200AQ86VY9 491 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 STX12Q86Y82 276 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 PSTKQ8IV42 348 aaKnown RBP5.72□□□□□ -1.49
CAPN3-211ENST00000562199 MCEMP1Q8IX19 187 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 GALNT12Q8IXK2 581 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 SYCP3Q8IZU3 236 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 AHI1Q8N157 1196 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 KCTD6Q8NC69 237 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 FAM13CQ8NE31 585 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 PIP4K2CQ8TBX8 421 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 ADAMTS15Q8TE58 950 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 TSPEARQ8WU66 669 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 BTN2A2Q8WVV5 523 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 MAIP1Q8WWC4 291 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 INPP5DQ92835 1189 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 DDX17Q92841 729 aaKnown RBP5.72□□□□□ -1.49
CAPN3-211ENST00000562199 LRRC39Q96DD0 335 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 ERO1AQ96HE7 468 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 PGBD1Q96JS3 809 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 IFT74Q96LB3 600 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 CEP19Q96LK0 163 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 TTC1Q99614 292 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 CIB1Q99828 191 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 CITED2Q99967 270 aaPredicted RBP5.72□□□□□ -1.49
CAPN3-211ENST00000562199 SPATA9Q9BWV2 254 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 ZSCAN16Q9H4T2 348 aaPredicted RBP5.72□□□□□ -1.49
CAPN3-211ENST00000562199 C19orf44Q9H6X5 657 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 IFT22Q9H7X7 185 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 CERS4Q9HA82 394 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 SPACA1Q9HBV2 294 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 CRTAC1Q9NQ79 661 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 FAM114A2Q9NRY5 505 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 KRT84Q9NSB2 600 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 PAQR5Q9NXK6 330 aaPredicted RBP5.72□□□□□ -1.49
CAPN3-211ENST00000562199 STK32BQ9NY57 414 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 SENP1Q9P0U3 644 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 GMIPQ9P107 970 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 KLHL9Q9P2J3 617 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 CACNG4Q9UBN1 327 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 TRPS1Q9UHF7 1281 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 TLK1Q9UKI8 766 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 VANGL2Q9ULK5 521 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 SNX6Q9UNH7 406 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 STX8Q9UNK0 236 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 PIN4Q9Y237 131 aaKnown RBP5.72□□□□□ -1.49
CAPN3-211ENST00000562199 NCAPD2Q15021 1401 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 ADAMTS13Q76LX8 1427 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 SH3TC1Q8TE82 1336 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 PASKQ96RG2 1323 aa5.72□□□□□ -1.49
CAPN3-211ENST00000562199 LMTK3Q96Q04 1460 aa5.71□□□□□ -1.49
CAPN3-211ENST00000562199 ROBO2Q9HCK4 1378 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 A0A0U1RQK1 487 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 ZNF320A2RRD8 509 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 SH3D21A4FU49 640 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 CAPN8A6NHC0 703 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 METTL12A8MUP2 240 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 ZNF879B4DU55 563 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 KIF28PB7ZC32 967 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 NT5C1B-RDH14C9J2C7 533 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 H7BY64 318 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 EIF1AYO14602 144 aaKnown RBP5.71□□□□□ -1.5
CAPN3-211ENST00000562199 SCAMP1O15126 338 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 PAX4O43316 350 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 CA12O43570 354 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 AP1G1O43747 822 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 KRT86O43790 486 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 PTP4A3O75365 173 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 RECQL4O94761 1208 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 CAMTA2O94983 1202 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 FGF4P08620 206 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 USP17L7P0C7H9 530 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 TPBGLP0DKB5 382 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 TXNP10599 105 aaKnown RBP5.71□□□□□ -1.5
CAPN3-211ENST00000562199 EDN3P14138 238 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 CPA1P15085 419 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 KRT4P19013 534 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 GLRA2P23416 452 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 GPTP24298 496 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 TBXAS1P24557 533 aaPredicted RBP5.71□□□□□ -1.5
CAPN3-211ENST00000562199 TLX1P31314 330 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms