RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 MARCH2Q9P0N8 246 aa12.24□□□□□ -0.45
NSMCE1-202ENST00000561960 SFMBT1Q9UHJ3 866 aa12.24□□□□□ -0.45
NSMCE1-202ENST00000561960 RAI2Q9Y5P3 530 aa12.24□□□□□ -0.45
NSMCE1-202ENST00000561960 GOLGA6L7A0A1B0GV03 622 aa12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 PYCARD-AS1I3L0S3 204 aa12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 FLRT2O43155 660 aa12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 KLRC4O43908 158 aa12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 SEMA4FO95754 770 aa12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 ASS1P00966 412 aaKnown RBP12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 FAM163BP0C2L3 166 aa12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 RALAP11233 206 aa12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 P4HA1P13674 534 aa12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 HOXD9P28356 352 aaPredicted RBP12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 HLA-FP30511 346 aa12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 EIF2S3P41091 472 aaKnown RBP12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 AFF3P51826 1226 aaKnown RBP12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 PPP3CAQ08209 521 aa12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 CAMK2BQ13554 666 aa12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 ZACNQ401N2 412 aa12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 KMT5BQ4FZB7 885 aa12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 RFWD3Q6PCD5 774 aa12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 CHST9Q7L1S5 443 aa12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 GLRX5Q86SX6 157 aa12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 RBBP8NLQ8NC74 664 aaPredicted RBP12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 CADM4Q8NFZ8 388 aa12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 HEXIM2Q96MH2 286 aaKnown RBP12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 NT5C1AQ9BXI3 368 aa12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 LRRC27Q9C0I9 530 aa12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 SERGEFQ9UGK8 458 aa12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 SLC27A6Q9Y2P4 619 aa12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 PCDHA5Q9Y5H7 936 aa12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 PTPRQQ9UMZ3 2332 aa12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 KNTC1P50748 2209 aa12.23□□□□□ -0.45
NSMCE1-202ENST00000561960 WNT9AO14904 365 aa12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 TLX3O43711 291 aaPredicted RBP12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 CUTAO60888 179 aa12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 C1QL1O75973 258 aa12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 CALCAP01258 141 aa12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 PRR29P0C7W0 189 aa12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 KRT10P13645 584 aa12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 OXTRP30559 389 aa12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 ME1P48163 572 aa12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 YWHAGP61981 247 aaKnown RBP eCLIP12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 RPS14P62263 151 aaKnown RBP12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 CLDN10P78369 228 aa12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 ENPP2Q13822 863 aa12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 CCDC186Q7Z3E2 898 aa12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 FMNL3Q8IVF7 1028 aa12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 C12orf56Q8IXR9 622 aa12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 OR2T3Q8NH03 318 aa12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 DUSP9Q99956 384 aaKnown RBP12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 DUSP16Q9BY84 665 aa12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 KCTD10Q9H3F6 313 aa12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 CUEDC2Q9H467 287 aa12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 EXOC1Q9NV70 894 aa12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 DMAC2Q9NW81 257 aa12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 STIM2Q9P246 746 aa12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 FTSJ1Q9UET6 329 aa12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 COL5A1P20908 1838 aaPredicted RBP12.22□□□□□ -0.45
NSMCE1-202ENST00000561960 ARID1BQ8NFD5 2236 aaPredicted RBP12.21□□□□□ -0.45
NSMCE1-202ENST00000561960 CYBBP04839 570 aa12.21□□□□□ -0.45
NSMCE1-202ENST00000561960 PDIA4P13667 645 aaKnown RBP12.21□□□□□ -0.45
NSMCE1-202ENST00000561960 CD70P32970 193 aa12.21□□□□□ -0.45
NSMCE1-202ENST00000561960 ABCG1P45844 678 aa12.21□□□□□ -0.45
NSMCE1-202ENST00000561960 CCT8P50990 548 aa12.21□□□□□ -0.45
NSMCE1-202ENST00000561960 VAMP7P51809 220 aa12.21□□□□□ -0.45
NSMCE1-202ENST00000561960 TKTL1P51854 596 aa12.21□□□□□ -0.45
NSMCE1-202ENST00000561960 INCA1Q0VD86 236 aa12.21□□□□□ -0.45
NSMCE1-202ENST00000561960 GOLGA7BQ2TAP0 167 aa12.21□□□□□ -0.45
NSMCE1-202ENST00000561960 IL27RAQ6UWB1 636 aa12.21□□□□□ -0.45
NSMCE1-202ENST00000561960 METTL3Q86U44 580 aaKnown RBP12.21□□□□□ -0.45
NSMCE1-202ENST00000561960 PIGZQ86VD9 579 aa12.21□□□□□ -0.45
NSMCE1-202ENST00000561960 UNC93AQ86WB7 457 aa12.21□□□□□ -0.45
NSMCE1-202ENST00000561960 SEMA4DQ92854 862 aa12.21□□□□□ -0.45
NSMCE1-202ENST00000561960 TATDN2Q93075 761 aa12.21□□□□□ -0.45
NSMCE1-202ENST00000561960 MYEOVQ96EZ4 313 aa12.21□□□□□ -0.45
NSMCE1-202ENST00000561960 CDC6Q99741 560 aa12.21□□□□□ -0.45
NSMCE1-202ENST00000561960 ULBP1Q9BZM6 244 aa12.21□□□□□ -0.45
NSMCE1-202ENST00000561960 EBF2Q9HAK2 575 aa12.21□□□□□ -0.45
NSMCE1-202ENST00000561960 PRSS16Q9NQE7 514 aa12.21□□□□□ -0.45
NSMCE1-202ENST00000561960 PCDHA7Q9UN72 937 aa12.21□□□□□ -0.45
NSMCE1-202ENST00000561960 ZNF462Q96JM2 2506 aa12.21□□□□□ -0.45
NSMCE1-202ENST00000561960 TNFSF14O43557 240 aa12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 PPP6R2O75170 966 aa12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 DKK1O94907 266 aa12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 DNTTP04053 509 aa12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 WNT1P04628 370 aa12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 ZNF883P0CG24 379 aa12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 CHKAP35790 457 aa12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 COG7P83436 770 aa12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 CAMK2GQ13555 558 aaPredicted RBP12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 TEAD4Q15561 434 aa12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 PTPRNQ16849 979 aa12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 CNNM4Q6P4Q7 775 aa12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 KLHDC10Q6PID8 442 aa12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 MMS22LQ6ZRQ5 1243 aa12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 ADIPOR2Q86V24 386 aa12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 DHX40Q8IX18 779 aaKnown RBP12.2□□□□□ -0.46
NSMCE1-202ENST00000561960 EID2Q8N6I1 236 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms