RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 WDR60Q8WVS4 1066 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 ATG4AQ8WYN0 398 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 LPIN2Q92539 896 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 FUBP1Q96AE4 644 aaKnown RBP4.28□□□□□ -1.72
HERC1-215ENST00000561436 FKBP10Q96AY3 582 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 NAP1L4Q99733 375 aaKnown RBP4.28□□□□□ -1.72
HERC1-215ENST00000561436 GDF15Q99988 308 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 VN1R3Q9BXE9 311 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 TMEM120AQ9BXJ8 343 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 AMBRA1Q9C0C7 1298 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 MAGEH1Q9H213 219 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 TOR3AQ9H497 397 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 TRIM36Q9NQ86 728 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 IL17RBQ9NRM6 502 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 LUZP4Q9P127 313 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 HERC5Q9UII4 1024 aaKnown RBP4.28□□□□□ -1.72
HERC1-215ENST00000561436 DGKBQ9Y6T7 804 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 RGPD1P0DJD0 1748 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 A0A087WZ62 844 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 CCDC189A1A4V9 331 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 TRIM38O00635 465 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 ZSCAN9O15535 394 aaPredicted RBP4.27□□□□□ -1.73
HERC1-215ENST00000561436 ASNA1O43681 348 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 PRKCBP05771 671 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 HGFP14210 728 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 PECAM1P16284 738 aaPredicted RBP4.27□□□□□ -1.73
HERC1-215ENST00000561436 ADORA2AP29274 412 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 CXCR5P32302 372 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 AVPR1BP47901 424 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 RENBPP51606 427 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 PPFIA1Q13136 1202 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 MPP3Q13368 585 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 ATP1A4Q13733 1029 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 CLCA4Q14CN2 919 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 ST3GAL2Q16842 350 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 TRIM71Q2Q1W2 868 aaKnown RBP4.27□□□□□ -1.73
HERC1-215ENST00000561436 PTCHD3Q3KNS1 767 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 ADCK5Q3MIX3 580 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 TUBB8Q3ZCM7 444 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 ARHGAP15Q53QZ3 475 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 PLAC9Q5JTB6 97 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 ANKRD45Q5TZF3 282 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 RAP1GAP2Q684P5 730 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 DENND2CQ68D51 928 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 DTX2Q86UW9 622 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 DNAJC10Q8IXB1 793 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 GALNT15Q8N3T1 639 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 TFAP2BQ92481 460 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 EID2BQ96D98 161 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 FBXL20Q96IG2 436 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 VPS50Q96JG6 964 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 EIF3CQ99613 913 aaKnown RBP4.27□□□□□ -1.73
HERC1-215ENST00000561436 NUDT22Q9BRQ3 303 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 C17orf80Q9BSJ5 609 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 DPCDQ9BVM2 203 aaPredicted RBP4.27□□□□□ -1.73
HERC1-215ENST00000561436 KATNAL1Q9BW62 490 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 KCTD5Q9NXV2 234 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 EHD3Q9NZN3 535 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 STEAP1Q9UHE8 339 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 CCNL1Q9UK58 526 aaPredicted RBP4.27□□□□□ -1.73
HERC1-215ENST00000561436 NFU1Q9UMS0 254 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 GTF2A1LQ9UNN4 478 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 SH2B3Q9UQQ2 575 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 SSX2IPQ9Y2D8 614 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 DTNAQ9Y4J8 743 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 TNS2Q63HR2 1409 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 NSD3Q9BZ95 1437 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 ANKRD36BQ8N2N9 1353 aa4.27□□□□□ -1.73
HERC1-215ENST00000561436 EP400Q96L91 3159 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 SLIT3O75094 1523 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 FCHO1O14526 889 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 PPM1DO15297 605 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 YY2O15391 372 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 TOMM70O94826 608 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 ESRRBO95718 433 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 CSF1RP07333 972 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 RHOP08100 348 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 CHRM2P08172 466 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 DLDP09622 509 aaKnown RBP4.26□□□□□ -1.73
HERC1-215ENST00000561436 DHRS4L1P0CG22 281 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 TGM1P22735 817 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 ATXN1P54253 815 aaKnown RBP4.26□□□□□ -1.73
HERC1-215ENST00000561436 TPTEP56180 551 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 ARL4CP56559 192 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 TIAL1Q01085 375 aaKnown RBP eCLIP4.26□□□□□ -1.73
HERC1-215ENST00000561436 GALNT1Q10472 559 aaPredicted RBP4.26□□□□□ -1.73
HERC1-215ENST00000561436 EIF2B5Q13144 721 aaKnown RBP4.26□□□□□ -1.73
HERC1-215ENST00000561436 CSHL1Q14406 222 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 TBCCQ15814 346 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 TMTC4Q5T4D3 741 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 CLEC9AQ6UXN8 241 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 LDHAL6AQ6ZMR3 332 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 PTF1AQ7RTS3 328 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 LNX2Q8N448 690 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 MYCBPAPQ8TBZ2 947 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 ACTRT2Q8TDY3 377 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 STYXQ8WUJ0 223 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 IP6K1Q92551 441 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 RSC1A1Q92681 617 aa4.26□□□□□ -1.73
HERC1-215ENST00000561436 GCC1Q96CN9 775 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms