RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 CHURC1-FNTBB4DL54 471 aa20.7■□□□□ 0.9
TSPAN3-210ENST00000561277 ACSL4O60488 711 aa20.7■□□□□ 0.9
TSPAN3-210ENST00000561277 MMP8P22894 467 aa20.7■□□□□ 0.9
TSPAN3-210ENST00000561277 HOXC13P31276 330 aa20.7■□□□□ 0.9
TSPAN3-210ENST00000561277 NSFP46459 744 aaKnown RBP20.7■□□□□ 0.9
TSPAN3-210ENST00000561277 NME3Q13232 169 aa20.7■□□□□ 0.9
TSPAN3-210ENST00000561277 ASIC2Q16515 512 aa20.7■□□□□ 0.9
TSPAN3-210ENST00000561277 ZNF528Q3MIS6 628 aa20.7■□□□□ 0.9
TSPAN3-210ENST00000561277 ZC3H12AQ5D1E8 599 aaKnown RBP20.7■□□□□ 0.9
TSPAN3-210ENST00000561277 IRF2BP2Q7Z5L9 587 aa20.7■□□□□ 0.9
TSPAN3-210ENST00000561277 CCDC26Q8TAB7 109 aa20.7■□□□□ 0.9
TSPAN3-210ENST00000561277 USP33Q8TEY7 942 aa20.7■□□□□ 0.9
TSPAN3-210ENST00000561277 RNF34Q969K3 372 aa20.7■□□□□ 0.9
TSPAN3-210ENST00000561277 UNGP13051 313 aaPredicted RBP20.69■□□□□ 0.9
TSPAN3-210ENST00000561277 SLC6A4P31645 630 aa20.69■□□□□ 0.9
TSPAN3-210ENST00000561277 NOS2P35228 1153 aa20.69■□□□□ 0.9
TSPAN3-210ENST00000561277 TIE1P35590 1138 aa20.69■□□□□ 0.9
TSPAN3-210ENST00000561277 PBX1P40424 430 aa20.69■□□□□ 0.9
TSPAN3-210ENST00000561277 MATKP42679 507 aa20.69■□□□□ 0.9
TSPAN3-210ENST00000561277 CLEC16AQ2KHT3 1053 aa20.69■□□□□ 0.9
TSPAN3-210ENST00000561277 MPPE1Q53F39 396 aa20.69■□□□□ 0.9
TSPAN3-210ENST00000561277 FAM133BQ5BKY9 247 aaKnown RBP20.69■□□□□ 0.9
TSPAN3-210ENST00000561277 EMC10Q5UCC4 262 aa20.69■□□□□ 0.9
TSPAN3-210ENST00000561277 SFMBT2Q5VUG0 894 aa20.69■□□□□ 0.9
TSPAN3-210ENST00000561277 E4F1Q66K89 784 aaPredicted RBP20.69■□□□□ 0.9
TSPAN3-210ENST00000561277 ACDQ96AP0 544 aa20.69■□□□□ 0.9
TSPAN3-210ENST00000561277 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.69■□□□□ 0.9
TSPAN3-210ENST00000561277 XPO7Q9UIA9 1087 aaKnown RBP20.69■□□□□ 0.9
TSPAN3-210ENST00000561277 SLC8A2Q9UPR5 921 aa20.69■□□□□ 0.9
TSPAN3-210ENST00000561277 M0QYT0 321 aa20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 GBP1P32455 592 aa20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 SCNN1AP37088 669 aa20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 TNFRSF4P43489 277 aa20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 SGSHP51688 502 aa20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 ZNF445P59923 1031 aa20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 CENPCQ03188 943 aa20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 HEATR6Q6AI08 1181 aaKnown RBP20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 NADSYN1Q6IA69 706 aa20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 NUDT18Q6ZVK8 323 aa20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 CCDC33Q8N5R6 958 aa20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 TMA16Q96EY4 203 aaKnown RBP20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 XPO4Q9C0E2 1151 aaKnown RBP20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 METTL5Q9NRN9 209 aaKnown RBP20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 CLEC4EQ9ULY5 219 aa20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 STAP1Q9ULZ2 295 aa20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 K7ESF4 209 aa20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 TDGF1P13385 188 aa20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 HOXD9P28356 352 aaPredicted RBP20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 FLT3P36888 993 aa20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 SULT1E1P49888 294 aa20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 DMWDQ09019 674 aa20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 FIGNQ5HY92 759 aa20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 ALLCQ8N6M5 410 aa20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 NUP58Q9BVL2 599 aa20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 NUCKS1Q9H1E3 243 aaKnown RBP20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 ADAM22Q9P0K1 906 aa20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 CALCOCO1Q9P1Z2 691 aa20.68■□□□□ 0.9
TSPAN3-210ENST00000561277 A0A0A0MRY4 1105 aa20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 PRRT4C9JH25 899 aa20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 GFRA2O00451 464 aa20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 PAPSS2O95340 614 aaPredicted RBP20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 TPM3P06753 285 aa20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 CISD3P0C7P0 127 aa20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 TFE3P19532 575 aaPredicted RBP20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 ABCB4P21439 1286 aa20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 CCR1P32246 355 aa20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 NBL1P41271 181 aa20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 KIR2DL1P43626 348 aaPredicted RBP20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 PXNP49023 591 aaPredicted RBP20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 MRPS21P82921 87 aaKnown RBP20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 EIF4EBP2Q13542 120 aaPredicted RBP20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 DMC1Q14565 340 aa20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 OTUD1Q5VV17 481 aaPredicted RBP20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 ZC3H14Q6PJT7 736 aaKnown RBP20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 SYT13Q7L8C5 426 aa20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 CPLX3Q8WVH0 158 aa20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 AZIN2Q96A70 460 aa20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 BTN2A3PQ96KV6 586 aa20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 PRICKLE1Q96MT3 831 aaPredicted RBP20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 HHIPQ96QV1 700 aa20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 DDX50Q9BQ39 737 aaKnown RBP20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 EDEM3Q9BZQ6 932 aa20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 ZSCAN32Q9NX65 697 aa20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 AIPL1Q9NZN9 384 aa20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 FBXO10Q9UK96 956 aa20.67■□□□□ 0.9
TSPAN3-210ENST00000561277 TBL1XO60907 577 aa20.66■□□□□ 0.9
TSPAN3-210ENST00000561277 GJB6O95452 261 aa20.66■□□□□ 0.9
TSPAN3-210ENST00000561277 KLF8O95600 359 aaPredicted RBP20.66■□□□□ 0.9
TSPAN3-210ENST00000561277 TNFAIP3P21580 790 aa20.66■□□□□ 0.9
TSPAN3-210ENST00000561277 NRLP54845 237 aa20.66■□□□□ 0.9
TSPAN3-210ENST00000561277 PIK3R6Q5UE93 754 aa20.66■□□□□ 0.9
TSPAN3-210ENST00000561277 RAP1GAP2Q684P5 730 aa20.66■□□□□ 0.9
TSPAN3-210ENST00000561277 TRNP1Q6NT89 227 aa20.66■□□□□ 0.9
TSPAN3-210ENST00000561277 CHSY1Q86X52 802 aa20.66■□□□□ 0.9
TSPAN3-210ENST00000561277 EMC1Q8N766 993 aa20.66■□□□□ 0.9
TSPAN3-210ENST00000561277 ZNF513Q8N8E2 541 aaPredicted RBP20.66■□□□□ 0.9
TSPAN3-210ENST00000561277 ATP6V0D2Q8N8Y2 350 aa20.66■□□□□ 0.9
TSPAN3-210ENST00000561277 IL17RCQ8NAC3 791 aa20.66■□□□□ 0.9
TSPAN3-210ENST00000561277 TXNDC5Q8NBS9 432 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms