RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 CYTH4Q9UIA0 394 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 AGO1Q9UL18 857 aaKnown RBP11.12□□□□□ -0.63
TPM1-229ENST00000561242 PLA2G4CQ9UP65 541 aa11.12□□□□□ -0.63
TPM1-229ENST00000561242 KCNU1A8MYU2 1149 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 DDX3XO00571 662 aaKnown RBP eCLIP11.11□□□□□ -0.63
TPM1-229ENST00000561242 SRGAP2O75044 1071 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 ATP5BP06576 529 aaKnown RBP11.11□□□□□ -0.63
TPM1-229ENST00000561242 TYRP14679 529 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 ARSAP15289 507 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 EIF2DP41214 584 aaKnown RBP11.11□□□□□ -0.63
TPM1-229ENST00000561242 DGKGP49619 791 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 ZNF143P52747 638 aaPredicted RBP11.11□□□□□ -0.63
TPM1-229ENST00000561242 AIF1P55008 147 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 TNK2Q07912 1038 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 GSE1Q14687 1217 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 TAF5Q15542 800 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 EML3Q32P44 896 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 SYPL2Q5VXT5 272 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 RWDD4Q6NW29 188 aaKnown RBP11.11□□□□□ -0.63
TPM1-229ENST00000561242 MON1BQ7L1V2 547 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 STRADAQ7RTN6 431 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 SLFN11Q7Z7L1 901 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 TAC4Q86UU9 113 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 MFN1Q8IWA4 741 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 LGI2Q8N0V4 545 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 SYNPOQ8N3V7 929 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 CARNMT1Q8N4J0 409 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 EMC1Q8N766 993 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 FAM172AQ8WUF8 416 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 CFAP57Q96MR6 1250 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 FAM83CQ9BQN1 747 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 NUP85Q9BW27 656 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 SLC2A11Q9BYW1 496 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 ISCUQ9H1K1 167 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 LMAN1LQ9HAT1 526 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 ARHGEF4Q9NR80 690 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 ANAPC7Q9UJX3 599 aa11.11□□□□□ -0.63
TPM1-229ENST00000561242 VWA8A3KMH1 1905 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 A0A087X0T9 212 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 TBL1XO60907 577 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 FAM228BP0C875 321 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 GJA4P35212 333 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 GRIA2P42262 883 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 PTPN9P43378 593 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 CLCN5P51795 746 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 GALCP54803 685 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 STARD6P59095 220 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 KIF5AQ12840 1032 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 MAMLD1Q13495 774 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 KRT81Q14533 505 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 PON2Q15165 354 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 ASTLQ6HA08 431 aaPredicted RBP11.1□□□□□ -0.63
TPM1-229ENST00000561242 WDR59Q6PJI9 974 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 MAP7D3Q8IWC1 876 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 CPXM2Q8N436 756 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 FBXL6Q8N531 539 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 ACDQ96AP0 544 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 HAPLN3Q96S86 360 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 TBCBQ99426 244 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 EPAS1Q99814 870 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 IER2Q9BTL4 223 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 MAK16Q9BXY0 300 aaKnown RBP11.1□□□□□ -0.63
TPM1-229ENST00000561242 OSBPL6Q9BZF3 934 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 CD320Q9NPF0 282 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 SPATA6Q9NWH7 488 aaPredicted RBP11.1□□□□□ -0.63
TPM1-229ENST00000561242 ARHGAP20Q9P2F6 1191 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 INTUQ9ULD6 942 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 HPCAL4Q9UM19 191 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.1□□□□□ -0.63
TPM1-229ENST00000561242 EPN1Q9Y6I3 576 aaPredicted RBP11.1□□□□□ -0.63
TPM1-229ENST00000561242 MYO7AQ13402 2215 aa11.1□□□□□ -0.63
TPM1-229ENST00000561242 TMEM110-MUSTN1A8MSY1 372 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 PRR33A8MZF0 331 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 LAMTOR5O43504 91 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 SYNCRIPO60506 623 aaKnown RBP11.09□□□□□ -0.63
TPM1-229ENST00000561242 ALDH1A2O94788 518 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 PLEKP08567 350 aaPredicted RBP11.09□□□□□ -0.63
TPM1-229ENST00000561242 TMEM253P0C7T8 217 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 POLR2EP19388 210 aaKnown RBP11.09□□□□□ -0.63
TPM1-229ENST00000561242 TACR2P21452 398 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 CTHP32929 405 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 RFC1P35251 1148 aaPredicted RBP11.09□□□□□ -0.63
TPM1-229ENST00000561242 ARL4AP40617 200 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 GALK1P51570 392 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 GSCP56915 257 aaPredicted RBP11.09□□□□□ -0.63
TPM1-229ENST00000561242 TBX2Q13207 712 aaPredicted RBP11.09□□□□□ -0.63
TPM1-229ENST00000561242 BOLA3Q53S33 107 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 MPP7Q5T2T1 576 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 RAP1GAP2Q684P5 730 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 TMEM25Q86YD3 366 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 ZNF564Q8TBZ8 553 aaPredicted RBP11.09□□□□□ -0.63
TPM1-229ENST00000561242 WFIKKN2Q8TEU8 576 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 FCRL2Q96LA5 508 aaPredicted RBP11.09□□□□□ -0.63
TPM1-229ENST00000561242 NPY6RQ99463 290 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 TSGA10Q9BZW7 698 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 CIPCQ9C0C6 399 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 THAP2Q9H0W7 228 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 EPHX3Q9H6B9 360 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 CATSPERBQ9H7T0 1116 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 ZWILCHQ9H900 591 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms