RNA–Protein interactions for RNA: ENST00000561009.5

IRF9-212, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-212ENST00000561009 CAMK2BQ13554 666 aa12.15□□□□□ -0.46
IRF9-212ENST00000561009 CAMK2GQ13555 558 aaPredicted RBP12.15□□□□□ -0.46
IRF9-212ENST00000561009 E2F4Q16254 413 aa12.15□□□□□ -0.46
IRF9-212ENST00000561009 PTPRNQ16849 979 aa12.15□□□□□ -0.46
IRF9-212ENST00000561009 ZACNQ401N2 412 aa12.15□□□□□ -0.46
IRF9-212ENST00000561009 CPXM2Q8N436 756 aa12.15□□□□□ -0.46
IRF9-212ENST00000561009 C1orf216Q8TAB5 229 aa12.15□□□□□ -0.46
IRF9-212ENST00000561009 WFIKKN2Q8TEU8 576 aa12.15□□□□□ -0.46
IRF9-212ENST00000561009 SORCS1Q8WY21 1168 aa12.15□□□□□ -0.46
IRF9-212ENST00000561009 PLD4Q96BZ4 506 aa12.15□□□□□ -0.46
IRF9-212ENST00000561009 BIRC7Q96CA5 298 aa12.15□□□□□ -0.46
IRF9-212ENST00000561009 CRELD1Q96HD1 420 aa12.15□□□□□ -0.46
IRF9-212ENST00000561009 GZF1Q9H116 711 aaPredicted RBP12.15□□□□□ -0.46
IRF9-212ENST00000561009 SGK2Q9HBY8 427 aa12.15□□□□□ -0.46
IRF9-212ENST00000561009 PCDHGA1Q9Y5H4 931 aa12.15□□□□□ -0.46
IRF9-212ENST00000561009 LAMA5O15230 3695 aa12.15□□□□□ -0.47
IRF9-212ENST00000561009 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.14□□□□□ -0.47
IRF9-212ENST00000561009 PVALEFA0A1B0GWK0 134 aa12.14□□□□□ -0.47
IRF9-212ENST00000561009 H0Y8X5 98 aa12.14□□□□□ -0.47
IRF9-212ENST00000561009 KCNK3O14649 394 aa12.14□□□□□ -0.47
IRF9-212ENST00000561009 RNASEH1O60930 286 aaKnown RBP12.14□□□□□ -0.47
IRF9-212ENST00000561009 VNN1O95497 513 aa12.14□□□□□ -0.47
IRF9-212ENST00000561009 ASS1P00966 412 aaKnown RBP12.14□□□□□ -0.47
IRF9-212ENST00000561009 ATP5BP06576 529 aaKnown RBP12.14□□□□□ -0.47
IRF9-212ENST00000561009 ITGAVP06756 1048 aa12.14□□□□□ -0.47
IRF9-212ENST00000561009 CD58P19256 250 aa12.14□□□□□ -0.47
IRF9-212ENST00000561009 ASPAP45381 313 aa12.14□□□□□ -0.47
IRF9-212ENST00000561009 IL9RQ01113 521 aa12.14□□□□□ -0.47
IRF9-212ENST00000561009 SEMG2Q02383 582 aa12.14□□□□□ -0.47
IRF9-212ENST00000561009 SV2AQ7L0J3 742 aa12.14□□□□□ -0.47
IRF9-212ENST00000561009 SCD5Q86SK9 330 aa12.14□□□□□ -0.47
IRF9-212ENST00000561009 ZNF605Q86T29 641 aa12.14□□□□□ -0.47
IRF9-212ENST00000561009 LSM14AQ8ND56 463 aaKnown RBP12.14□□□□□ -0.47
IRF9-212ENST00000561009 PLEKHO2Q8TD55 490 aa12.14□□□□□ -0.47
IRF9-212ENST00000561009 ZNF396Q96N95 335 aaPredicted RBP12.14□□□□□ -0.47
IRF9-212ENST00000561009 DUSP16Q9BY84 665 aa12.14□□□□□ -0.47
IRF9-212ENST00000561009 BLZF1Q9H2G9 400 aa12.14□□□□□ -0.47
IRF9-212ENST00000561009 CYP3A43Q9HB55 503 aa12.14□□□□□ -0.47
IRF9-212ENST00000561009 SUN2Q9UH99 717 aa12.14□□□□□ -0.47
IRF9-212ENST00000561009 SCML1Q9UN30 329 aa12.14□□□□□ -0.47
IRF9-212ENST00000561009 FRMD4BQ9Y2L6 1034 aa12.14□□□□□ -0.47
IRF9-212ENST00000561009 GCN1Q92616 2671 aaKnown RBP12.14□□□□□ -0.47
IRF9-212ENST00000561009 CAPN8A6NHC0 703 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 FAM47DPA6NHR8 397 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 ENC1O14682 589 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 IKBKBO14920 756 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 ATXN7O15265 892 aaPredicted RBP12.13□□□□□ -0.47
IRF9-212ENST00000561009 YKT6O15498 198 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 TSPAN3O60637 253 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 PPP6R2O75170 966 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 RFPL3O75679 317 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 LDOC1O95751 146 aaPredicted RBP12.13□□□□□ -0.47
IRF9-212ENST00000561009 HLA-DRAP01903 254 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 PRB1P04280 392 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 C1SP09871 688 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 CTSKP43235 329 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 NASPP49321 788 aaPredicted RBP12.13□□□□□ -0.47
IRF9-212ENST00000561009 ST8SIA6P61647 398 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 YWHAGP61981 247 aaKnown RBP eCLIP12.13□□□□□ -0.47
IRF9-212ENST00000561009 RACK1P63244 317 aaKnown RBP12.13□□□□□ -0.47
IRF9-212ENST00000561009 DLG4P78352 724 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 PDE4CQ08493 712 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 INCA1Q0VD86 236 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 CEP135Q66GS9 1140 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 ZNF776Q68DI1 518 aaPredicted RBP12.13□□□□□ -0.47
IRF9-212ENST00000561009 SPOPLQ6IQ16 392 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 LAYNQ6UX15 382 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 CHST9Q7L1S5 443 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 CEP57L1Q8IYX8 460 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 AHI1Q8N157 1196 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 ZNF557Q8N988 423 aaPredicted RBP12.13□□□□□ -0.47
IRF9-212ENST00000561009 LINC00301Q8NCQ3 95 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 TMC2Q8TDI7 906 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 RNF139Q8WU17 664 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 CYB5D2Q8WUJ1 264 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 CNDP2Q96KP4 475 aaKnown RBP12.13□□□□□ -0.47
IRF9-212ENST00000561009 HEXIM2Q96MH2 286 aaKnown RBP12.13□□□□□ -0.47
IRF9-212ENST00000561009 FCRL3Q96P31 734 aaPredicted RBP12.13□□□□□ -0.47
IRF9-212ENST00000561009 ARID3AQ99856 593 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 OLA1Q9NTK5 396 aaKnown RBP12.13□□□□□ -0.47
IRF9-212ENST00000561009 EXOC1Q9NV70 894 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 FAM13BQ9NYF5 915 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 USP3Q9Y6I4 520 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 IGSF10Q6WRI0 2623 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 PI4KAP42356 2102 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 LOC400499M0QZD8 3231 aa12.13□□□□□ -0.47
IRF9-212ENST00000561009 CEP192Q8TEP8 1941 aa12.12□□□□□ -0.47
IRF9-212ENST00000561009 A0A1B0GTQ1 180 aa12.12□□□□□ -0.47
IRF9-212ENST00000561009 VILLO15195 856 aa12.12□□□□□ -0.47
IRF9-212ENST00000561009 POLR2DO15514 142 aaKnown RBP12.12□□□□□ -0.47
IRF9-212ENST00000561009 PAPSS1O43252 624 aaPredicted RBP12.12□□□□□ -0.47
IRF9-212ENST00000561009 CUTAO60888 179 aa12.12□□□□□ -0.47
IRF9-212ENST00000561009 POLR2EP19388 210 aaKnown RBP12.12□□□□□ -0.47
IRF9-212ENST00000561009 ITPKBP27987 946 aa12.12□□□□□ -0.47
IRF9-212ENST00000561009 EIF2S3P41091 472 aaKnown RBP12.12□□□□□ -0.47
IRF9-212ENST00000561009 AFMP43652 599 aa12.12□□□□□ -0.47
IRF9-212ENST00000561009 ARRB1P49407 418 aaPredicted RBP12.12□□□□□ -0.47
IRF9-212ENST00000561009 RPS14P62263 151 aaKnown RBP12.12□□□□□ -0.47
IRF9-212ENST00000561009 CUL4AQ13619 759 aa12.12□□□□□ -0.47
IRF9-212ENST00000561009 KMT5BQ4FZB7 885 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms