RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 ZNF234Q14588 700 aa10.66□□□□□ -0.7
LDLR-214ENST00000560628 STARD3Q14849 445 aa10.66□□□□□ -0.7
LDLR-214ENST00000560628 SPDYCQ5MJ68 293 aa10.66□□□□□ -0.7
LDLR-214ENST00000560628 ADGRF1Q5T601 910 aa10.66□□□□□ -0.7
LDLR-214ENST00000560628 SH3PXD2AQ5TCZ1 1133 aa10.66□□□□□ -0.7
LDLR-214ENST00000560628 DENND1BQ6P3S1 775 aa10.66□□□□□ -0.7
LDLR-214ENST00000560628 RFWD3Q6PCD5 774 aa10.66□□□□□ -0.7
LDLR-214ENST00000560628 GJB7Q6PEY0 223 aa10.66□□□□□ -0.7
LDLR-214ENST00000560628 FOXR2Q6PJQ5 311 aa10.66□□□□□ -0.7
LDLR-214ENST00000560628 ANKS1BQ7Z6G8 1248 aa10.66□□□□□ -0.7
LDLR-214ENST00000560628 SLC41A1Q8IVJ1 513 aa10.66□□□□□ -0.7
LDLR-214ENST00000560628 SCUBE3Q8IX30 993 aa10.66□□□□□ -0.7
LDLR-214ENST00000560628 FAM217AQ8IXS0 508 aa10.66□□□□□ -0.7
LDLR-214ENST00000560628 SCML4Q8N228 414 aa10.66□□□□□ -0.7
LDLR-214ENST00000560628 TRIML1Q8N9V2 468 aa10.66□□□□□ -0.7
LDLR-214ENST00000560628 CRACR2AQ9BSW2 395 aa10.66□□□□□ -0.7
LDLR-214ENST00000560628 SLC2A11Q9BYW1 496 aa10.66□□□□□ -0.7
LDLR-214ENST00000560628 PRDM16Q9HAZ2 1276 aa10.66□□□□□ -0.7
LDLR-214ENST00000560628 ST7Q9NRC1 585 aa10.66□□□□□ -0.7
LDLR-214ENST00000560628 EVLQ9UI08 416 aaPredicted RBP10.66□□□□□ -0.7
LDLR-214ENST00000560628 NUP205Q92621 2012 aa10.66□□□□□ -0.7
LDLR-214ENST00000560628 TIMM44O43615 452 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 LETM1O95202 739 aaPredicted RBP10.65□□□□□ -0.7
LDLR-214ENST00000560628 FGFR1OPO95684 399 aaKnown RBP10.65□□□□□ -0.7
LDLR-214ENST00000560628 LTFP02788 710 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 NCAM1P13591 858 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 HLA-EP13747 358 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 PRKCHP24723 683 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 MAOBP27338 520 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 HLA-FP30511 346 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 ZNF132P52740 706 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 MARSP56192 900 aaKnown RBP10.65□□□□□ -0.7
LDLR-214ENST00000560628 TBX4P57082 545 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 APBA1Q02410 837 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 GCNT1Q02742 428 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 ARID5AQ03989 594 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 LMAN2Q12907 356 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 STILQ15468 1287 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 DUOXA1Q1HG43 343 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 MSANTD2Q6P1R3 559 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 SLC23A3Q6PIS1 610 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 CACUL1Q86Y37 369 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 TMPRSS6Q8IU80 811 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 RGL4Q8IZJ4 473 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 CYB5D2Q8WUJ1 264 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 IRGQQ8WZA9 623 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 GOLGA1Q92805 767 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 HSFY1Q96LI6 401 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 HSPA12BQ96MM6 686 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 GTPBP2Q9BX10 602 aaKnown RBP10.65□□□□□ -0.7
LDLR-214ENST00000560628 MKRN2Q9H000 416 aaKnown RBP10.65□□□□□ -0.7
LDLR-214ENST00000560628 ACP6Q9NPH0 428 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 ITM2CQ9NQX7 267 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 ABCB8Q9NUT2 735 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 STIM2Q9P246 746 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 KIAA1468Q9P260 1216 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 STOML2Q9UJZ1 356 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 SLC6A14Q9UN76 642 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 NAALADL1Q9UQQ1 740 aa10.65□□□□□ -0.7
LDLR-214ENST00000560628 KCNJ18B7U540 433 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 NPC1O15118 1278 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 ACSL4O60488 711 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 TBL1XO60907 577 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 FBXO21O94952 628 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 IGLV3-27P01718 113 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 FYNP06241 537 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 EPHX1P07099 455 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 SLC9A1P19634 815 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 PMLP29590 882 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 CD6P30203 668 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 SLC6A4P31645 630 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 USP8P40818 1118 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 GPD2P43304 727 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 SLC11A2P49281 568 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 ATXN3P54252 364 aaPredicted RBP10.64□□□□□ -0.71
LDLR-214ENST00000560628 UBE2HP62256 183 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 GFPT1Q06210 699 aaPredicted RBP10.64□□□□□ -0.71
LDLR-214ENST00000560628 ENPP2Q13822 863 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 ARHGAP44Q17R89 818 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 FNDC3BQ53EP0 1204 aaKnown RBP10.64□□□□□ -0.71
LDLR-214ENST00000560628 SERPINA13PQ6UXR4 307 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 CHST9Q7L1S5 443 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 ADIPOR2Q86V24 386 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 UNC45BQ8IWX7 931 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 ZNF366Q8N895 744 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 DEFB124Q8NES8 71 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 OR2I1PQ8NGU4 316 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 ADAM32Q8TC27 787 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 ZNF606Q8WXB4 792 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 FAM149B1Q96BN6 582 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 MYEOVQ96EZ4 313 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 SIPA1Q96FS4 1042 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 TOE1Q96GM8 510 aaKnown RBP10.64□□□□□ -0.71
LDLR-214ENST00000560628 ZNF419Q96HQ0 510 aaPredicted RBP10.64□□□□□ -0.71
LDLR-214ENST00000560628 MED15Q96RN5 788 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 GPR174Q9BXC1 333 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 RWDD2AQ9UIY3 292 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 ANGPTL2Q9UKU9 493 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 PLA2G4CQ9UP65 541 aa10.64□□□□□ -0.71
LDLR-214ENST00000560628 CNTN6Q9UQ52 1028 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms