RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 SMYD3Q9H7B4 428 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 HSPBP1Q9NZL4 362 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 SCML2Q9UQR0 700 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 ZNF510Q9Y2H8 683 aa9.4□□□□□ -0.9
RABGGTA-217ENST00000560521 AHCTF1Q8WYP5 2266 aa9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 A0A1W2PPC4 97 aa9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 WNT9AO14904 365 aa9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 TIMM44O43615 452 aa9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 IDEP14735 1019 aa9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 ABCB4P21439 1286 aa9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 GLDCP23378 1020 aa9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 C21orf59P57076 290 aa9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 INSM1Q01101 510 aaPredicted RBP9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 ALCAMQ13740 583 aa9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 EIF4HQ15056 248 aaKnown RBP9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 C10orf120Q5SQS8 335 aa9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 SV2BQ7L1I2 683 aa9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 ZNF276Q8N554 614 aa9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 DCBLD1Q8N8Z6 715 aa9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 ZNF248Q8NDW4 579 aa9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 SLC2A14Q8TDB8 520 aa9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 CYB5D2Q8WUJ1 264 aa9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 TNIP3Q96KP6 325 aa9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 CGRRF1Q99675 332 aa9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 SGK2Q9HBY8 427 aa9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 PRSS16Q9NQE7 514 aa9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 PANK4Q9NVE7 773 aa9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 STK17AQ9UEE5 414 aa9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 CLCA2Q9UQC9 943 aa9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 NBPF19A0A087WUL8 3843 aa9.39□□□□□ -0.91
RABGGTA-217ENST00000560521 SCN8AQ9UQD0 1980 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 SLC28A2O43868 658 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 HMBSP08397 361 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 EPHA8P29322 1005 aaPredicted RBP9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 ATICP31939 592 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 TMPRSS3P57727 454 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 ILKQ13418 452 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 TRPC3Q13507 836 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 PSMD6Q15008 389 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 E2F5Q15329 346 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 SNRNP35Q16560 246 aaKnown RBP9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 BMT2Q1RMZ1 405 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 RRAGBQ5VZM2 374 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 KIAA0895LQ68EN5 471 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 KDM7AQ6ZMT4 941 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 CLEC20AQ6ZU45 233 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 KANSL1Q7Z3B3 1105 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 SCD5Q86SK9 330 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 CRYBG2Q8N1P7 616 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 C12orf29Q8N999 325 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 SNRNP27Q8WVK2 155 aaKnown RBP9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 CCDC127Q96BQ5 260 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 MED8Q96G25 268 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 HIC2Q96JB3 615 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 SLC2A11Q9BYW1 496 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 VRTNQ9H8Y1 702 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 KIAA1586Q9HCI6 787 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 CCDC39Q9UFE4 941 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 AGO1Q9UL18 857 aaKnown RBP9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 PCDHB1Q9Y5F3 818 aa9.38□□□□□ -0.91
RABGGTA-217ENST00000560521 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 A0A1W2PR77 199 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 FAM47DPA6NHR8 397 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 C10orf142B7Z368 130 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 CLIC2O15247 247 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 TGFB1I1O43294 461 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 DNTTP04053 509 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 CKMT2P17540 419 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 ACP1P24666 158 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 CD38P28907 300 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 ADORA2BP29275 332 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 HLA-FP30511 346 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 CORO1AP31146 461 aaKnown RBP9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 GALCP54803 685 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 UCNP55089 124 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 PCBP4P57723 403 aaKnown RBP9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 COG7P83436 770 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 ARID5AQ03989 594 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 ZBTB16Q05516 673 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 CYP24A1Q07973 514 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 KCNJ12Q14500 433 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 FNDC3BQ53EP0 1204 aaKnown RBP9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 ZNF667Q5HYK9 610 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 SFMBT2Q5VUG0 894 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 BROXQ5VW32 411 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 ADIPOR2Q86V24 386 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 DENND1CQ8IV53 801 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 ZC3H3Q8IXZ2 948 aaKnown RBP9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 CPXM2Q8N436 756 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 DDI1Q8WTU0 396 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 HPS3Q969F9 1004 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 SYAP1Q96A49 352 aaPredicted RBP9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 JAKMIP2Q96AA8 810 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 ZNF578Q96N58 590 aaPredicted RBP9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 DCLK3Q9C098 648 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 FAM49BQ9NUQ9 324 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 HMGXB4Q9UGU5 601 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 NAGPAQ9UK23 515 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 PLA2G4CQ9UP65 541 aa9.37□□□□□ -0.91
RABGGTA-217ENST00000560521 SSUH2Q9Y2M2 353 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms