RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 KIF20AO95235 890 aa18.68■□□□□ 0.58
TSPAN3-208ENST00000560514 LDOC1O95751 146 aaPredicted RBP18.68■□□□□ 0.58
TSPAN3-208ENST00000560514 KLKB1P03952 638 aa18.68■□□□□ 0.58
TSPAN3-208ENST00000560514 C1SP09871 688 aa18.68■□□□□ 0.58
TSPAN3-208ENST00000560514 ABCB4P21439 1286 aa18.68■□□□□ 0.58
TSPAN3-208ENST00000560514 CTSKP43235 329 aa18.68■□□□□ 0.58
TSPAN3-208ENST00000560514 EFEMP1Q12805 493 aa18.68■□□□□ 0.58
TSPAN3-208ENST00000560514 CAMK2GQ13555 558 aaPredicted RBP18.68■□□□□ 0.58
TSPAN3-208ENST00000560514 EPM2AIP1Q7L775 607 aaPredicted RBP18.68■□□□□ 0.58
TSPAN3-208ENST00000560514 GPR155Q7Z3F1 870 aa18.68■□□□□ 0.58
TSPAN3-208ENST00000560514 DENND1CQ8IV53 801 aa18.68■□□□□ 0.58
TSPAN3-208ENST00000560514 ELMO3Q96BJ8 720 aa18.68■□□□□ 0.58
TSPAN3-208ENST00000560514 CYFIP2Q96F07 1278 aa18.68■□□□□ 0.58
TSPAN3-208ENST00000560514 CNDP2Q96KP4 475 aaKnown RBP18.68■□□□□ 0.58
TSPAN3-208ENST00000560514 HNRNPABQ99729 332 aaKnown RBP18.68■□□□□ 0.58
TSPAN3-208ENST00000560514 FBRSQ9HAH7 460 aa18.68■□□□□ 0.58
TSPAN3-208ENST00000560514 STRIP2Q9ULQ0 834 aa18.68■□□□□ 0.58
TSPAN3-208ENST00000560514 TEX51A0A1B0GUA7 166 aa18.67■□□□□ 0.58
TSPAN3-208ENST00000560514 PAPSS1O43252 624 aaPredicted RBP18.67■□□□□ 0.58
TSPAN3-208ENST00000560514 TLX3O43711 291 aaPredicted RBP18.67■□□□□ 0.58
TSPAN3-208ENST00000560514 TSPAN3O60637 253 aa18.67■□□□□ 0.58
TSPAN3-208ENST00000560514 ITGAVP06756 1048 aa18.67■□□□□ 0.58
TSPAN3-208ENST00000560514 ZBTB16Q05516 673 aa18.67■□□□□ 0.58
TSPAN3-208ENST00000560514 RSRC2Q7L4I2 434 aaKnown RBP18.67■□□□□ 0.58
TSPAN3-208ENST00000560514 ZNF843Q8N446 348 aa18.67■□□□□ 0.58
TSPAN3-208ENST00000560514 ZNF276Q8N554 614 aa18.67■□□□□ 0.58
TSPAN3-208ENST00000560514 GANCQ8TET4 914 aa18.67■□□□□ 0.58
TSPAN3-208ENST00000560514 P2RY11Q96G91 374 aa18.67■□□□□ 0.58
TSPAN3-208ENST00000560514 NRSN2Q9GZP1 204 aa18.67■□□□□ 0.58
TSPAN3-208ENST00000560514 SGK2Q9HBY8 427 aa18.67■□□□□ 0.58
TSPAN3-208ENST00000560514 CLIC5Q9NZA1 410 aa18.67■□□□□ 0.58
TSPAN3-208ENST00000560514 HMGXB4Q9UGU5 601 aa18.67■□□□□ 0.58
TSPAN3-208ENST00000560514 AGO1Q9UL18 857 aaKnown RBP18.67■□□□□ 0.58
TSPAN3-208ENST00000560514 NCKAP1Q9Y2A7 1128 aa18.67■□□□□ 0.58
TSPAN3-208ENST00000560514 PTPRQQ9UMZ3 2332 aa18.66■□□□□ 0.58
TSPAN3-208ENST00000560514 COL5A1P20908 1838 aaPredicted RBP18.66■□□□□ 0.58
TSPAN3-208ENST00000560514 A0A1B0GTQ1 180 aa18.66■□□□□ 0.58
TSPAN3-208ENST00000560514 HHLA1C9JL84 531 aa18.66■□□□□ 0.58
TSPAN3-208ENST00000560514 KIF11P52732 1056 aa18.66■□□□□ 0.58
TSPAN3-208ENST00000560514 TARDBPQ13148 414 aaKnown RBP eCLIP18.66■□□□□ 0.58
TSPAN3-208ENST00000560514 CCDC186Q7Z3E2 898 aa18.66■□□□□ 0.58
TSPAN3-208ENST00000560514 GATAD2AQ86YP4 633 aa18.66■□□□□ 0.58
TSPAN3-208ENST00000560514 CPXM2Q8N436 756 aa18.66■□□□□ 0.58
TSPAN3-208ENST00000560514 GOLGA1Q92805 767 aa18.66■□□□□ 0.58
TSPAN3-208ENST00000560514 GZF1Q9H116 711 aaPredicted RBP18.66■□□□□ 0.58
TSPAN3-208ENST00000560514 CUEDC2Q9H467 287 aa18.66■□□□□ 0.58
TSPAN3-208ENST00000560514 TFIP11Q9UBB9 837 aaKnown RBP18.66■□□□□ 0.58
TSPAN3-208ENST00000560514 MYLKQ15746 1914 aa18.65■□□□□ 0.58
TSPAN3-208ENST00000560514 FAM47DPA6NHR8 397 aa18.65■□□□□ 0.58
TSPAN3-208ENST00000560514 LRRIQ3A6PVS8 624 aaPredicted RBP18.65■□□□□ 0.58
TSPAN3-208ENST00000560514 J3QKU1 62 aa18.65■□□□□ 0.58
TSPAN3-208ENST00000560514 VILLO15195 856 aa18.65■□□□□ 0.58
TSPAN3-208ENST00000560514 C4BPAP04003 597 aaKnown RBP18.65■□□□□ 0.58
TSPAN3-208ENST00000560514 RPN1P04843 607 aaKnown RBP18.65■□□□□ 0.58
TSPAN3-208ENST00000560514 RACK1P63244 317 aaKnown RBP18.65■□□□□ 0.58
TSPAN3-208ENST00000560514 CFHR1Q03591 330 aa18.65■□□□□ 0.58
TSPAN3-208ENST00000560514 KCNT1Q5JUK3 1230 aa18.65■□□□□ 0.58
TSPAN3-208ENST00000560514 HES3Q5TGS1 186 aa18.65■□□□□ 0.58
TSPAN3-208ENST00000560514 TMEM215Q68D42 235 aa18.65■□□□□ 0.58
TSPAN3-208ENST00000560514 SCD5Q86SK9 330 aa18.65■□□□□ 0.58
TSPAN3-208ENST00000560514 C12orf56Q8IXR9 622 aa18.65■□□□□ 0.58
TSPAN3-208ENST00000560514 ARHGAP18Q8N392 663 aa18.65■□□□□ 0.58
TSPAN3-208ENST00000560514 ZNF366Q8N895 744 aa18.65■□□□□ 0.58
TSPAN3-208ENST00000560514 WFIKKN2Q8TEU8 576 aa18.65■□□□□ 0.58
TSPAN3-208ENST00000560514 PARD3BQ8TEW8 1205 aa18.65■□□□□ 0.58
TSPAN3-208ENST00000560514 CYB5D2Q8WUJ1 264 aa18.65■□□□□ 0.58
TSPAN3-208ENST00000560514 TAF4BQ92750 862 aa18.65■□□□□ 0.58
TSPAN3-208ENST00000560514 ELF4Q99607 663 aaPredicted RBP18.65■□□□□ 0.58
TSPAN3-208ENST00000560514 NT5C1AQ9BXI3 368 aa18.65■□□□□ 0.58
TSPAN3-208ENST00000560514 KBTBD4Q9NVX7 518 aa18.65■□□□□ 0.58
TSPAN3-208ENST00000560514 CLEC4EQ9ULY5 219 aa18.65■□□□□ 0.58
TSPAN3-208ENST00000560514 KALRNO60229 2985 aa18.65■□□□□ 0.58
TSPAN3-208ENST00000560514 SLC12A8A0AV02 714 aa18.64■□□□□ 0.57
TSPAN3-208ENST00000560514 YKT6O15498 198 aa18.64■□□□□ 0.57
TSPAN3-208ENST00000560514 CLDN6P56747 220 aa18.64■□□□□ 0.57
TSPAN3-208ENST00000560514 RPS14P62263 151 aaKnown RBP18.64■□□□□ 0.57
TSPAN3-208ENST00000560514 SFSWAPQ12872 951 aaKnown RBP18.64■□□□□ 0.57
TSPAN3-208ENST00000560514 DNAJC3Q13217 504 aa18.64■□□□□ 0.57
TSPAN3-208ENST00000560514 RTP5Q14D33 572 aa18.64■□□□□ 0.57
TSPAN3-208ENST00000560514 MPPE1Q53F39 396 aa18.64■□□□□ 0.57
TSPAN3-208ENST00000560514 TAF1BQ53T94 588 aaPredicted RBP18.64■□□□□ 0.57
TSPAN3-208ENST00000560514 KIAA0895LQ68EN5 471 aa18.64■□□□□ 0.57
TSPAN3-208ENST00000560514 RBBP8NLQ8NC74 664 aaPredicted RBP18.64■□□□□ 0.57
TSPAN3-208ENST00000560514 SNIP1Q8TAD8 396 aaKnown RBP18.64■□□□□ 0.57
TSPAN3-208ENST00000560514 GOLGA5Q8TBA6 731 aa18.64■□□□□ 0.57
TSPAN3-208ENST00000560514 FGF11Q92914 225 aa18.64■□□□□ 0.57
TSPAN3-208ENST00000560514 DHX58Q96C10 678 aa18.64■□□□□ 0.57
TSPAN3-208ENST00000560514 INTS4Q96HW7 963 aaKnown RBP18.64■□□□□ 0.57
TSPAN3-208ENST00000560514 MARCH2Q9P0N8 246 aa18.64■□□□□ 0.57
TSPAN3-208ENST00000560514 MORC2Q9Y6X9 1032 aaPredicted RBP18.64■□□□□ 0.57
TSPAN3-208ENST00000560514 CBX4O00257 560 aa18.63■□□□□ 0.57
TSPAN3-208ENST00000560514 VNN1O95497 513 aa18.63■□□□□ 0.57
TSPAN3-208ENST00000560514 ATP5BP06576 529 aaKnown RBP18.63■□□□□ 0.57
TSPAN3-208ENST00000560514 ACTN2P35609 894 aa18.63■□□□□ 0.57
TSPAN3-208ENST00000560514 PIK3CAP42336 1068 aa18.63■□□□□ 0.57
TSPAN3-208ENST00000560514 CXADRP78310 365 aa18.63■□□□□ 0.57
TSPAN3-208ENST00000560514 SLC39A14Q15043 492 aa18.63■□□□□ 0.57
TSPAN3-208ENST00000560514 KNOP1Q1ED39 458 aaKnown RBP18.63■□□□□ 0.57
TSPAN3-208ENST00000560514 ZNF776Q68DI1 518 aaPredicted RBP18.63■□□□□ 0.57
TSPAN3-208ENST00000560514 FAM173BQ6P4H8 233 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms