RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 HMBSP08397 361 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 RARGP13631 454 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 ERCC2P18074 760 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 TGM2P21980 687 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 PAX3P23760 479 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 AP1B1Q10567 949 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 TAF10Q12962 218 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 GPR17Q13304 367 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 KRT71Q3SY84 523 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 RASIP1Q5U651 963 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 DENND2CQ68D51 928 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 DENND5BQ6ZUT9 1274 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 MIB1Q86YT6 1006 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 ANKMY2Q8IV38 441 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 CCNYQ8ND76 341 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 EPS8L3Q8TE67 593 aaKnown RBP11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 TMEM175Q9BSA9 504 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 SAYSD1Q9NPB0 183 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 ABCC13Q9NSE7 274 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 PDE4DIPQ5VU43 2346 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 GOLGA6CA6NDK9 693 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 TBC1D4O60343 1298 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 LRIG2O94898 1065 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 SPATA31D3P0C874 917 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 GOLGA6DP0CG33 693 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 VAV1P15498 845 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 ATF6P18850 670 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 ATP1A2P50993 1020 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 TPI1P60174 286 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 EFEMP1Q12805 493 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 PSMD5Q16401 504 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 LONRF1Q17RB8 773 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 MSS51Q4VC12 460 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 FNBP1LQ5T0N5 605 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 RWDD4Q6NW29 188 aaKnown RBP11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 SPATA31D4Q6ZUB0 917 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 ANKS3Q6ZW76 656 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 C16orf59Q7L2K0 433 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 CCDC13Q8IYE1 715 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 NPWQ8N729 165 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 FBXO32Q969P5 355 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 CELF6Q96J87 481 aaKnown RBP11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 NCAPGQ9BPX3 1015 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 TMEM106CQ9BVX2 250 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 PNPLA8Q9NP80 782 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 GOLGA6AQ9NYA3 693 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 COL4A6Q14031 1691 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 OR6C75A6NL08 312 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 OPA1O60313 960 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 PARNO95453 639 aaKnown RBP11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 EPHB2P29323 1055 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 GBP1P32455 592 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 HPDP32754 393 aaPredicted RBP11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 CXCR3P49682 368 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 USP41Q3LFD5 358 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 VSTM1Q6UX27 236 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 ZBED8Q8IZ13 594 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 IRGQQ8WZA9 623 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 PRCCQ92733 491 aaPredicted RBP11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 MRRFQ96E11 262 aaKnown RBP11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 FUBP3Q96I24 572 aaKnown RBP eCLIP11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 YME1L1Q96TA2 773 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 CLSTN3Q9BQT9 956 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 RAB6BQ9NRW1 208 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 PIH1D1Q9NWS0 290 aaKnown RBP11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 MYO7AQ13402 2215 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 KCNK1O00180 336 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 TRIM66O15016 1216 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 IRAK2O43187 625 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 SEC24AO95486 1093 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 METTL18O95568 372 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 SYN1P17600 705 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 YWHAQP27348 245 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 PDIA2Q13087 525 aaKnown RBP11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 SLMAPQ14BN4 828 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 ARL13BQ3SXY8 428 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 MFSD5Q6N075 450 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 ZNF689Q96CS4 500 aaPredicted RBP11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 PGAP3Q96FM1 320 aaPredicted RBP11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 C8orf48Q96LL4 319 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 PRDM12Q9H4Q4 367 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 NDFIP2Q9NV92 336 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 NINJ2Q9NZG7 142 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 CXXC1Q9P0U4 656 aaPredicted RBP11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 CTNNAL1Q9UBT7 734 aa11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 FARP1Q9Y4F1 1045 aaPredicted RBP11.24□□□□□ -0.61
SNRPA1-211ENST00000560433 PATJQ8NI35 1801 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 H3BRJ5 948 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 PAGE1O75459 146 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 MYZAPP0CAP1 466 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 STIP1P31948 543 aaKnown RBP11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 DPYSQ14117 519 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 NAT8LQ8N9F0 302 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 BADQ92934 168 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 TMEM169Q96HH4 297 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 CCSER2Q9H7U1 834 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 TMBIM4Q9HC24 238 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 MPP6Q9NZW5 540 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms