RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 ACOX2Q99424 681 aa15.34■□□□□ 0.05
IDH3A-219ENST00000560414 CYTH4Q9UIA0 394 aa15.34■□□□□ 0.05
IDH3A-219ENST00000560414 FBXO10Q9UK96 956 aa15.34■□□□□ 0.05
IDH3A-219ENST00000560414 DNAJC12Q9UKB3 198 aa15.34■□□□□ 0.05
IDH3A-219ENST00000560414 CLEC4EQ9ULY5 219 aa15.34■□□□□ 0.05
IDH3A-219ENST00000560414 STARD13Q9Y3M8 1113 aa15.34■□□□□ 0.05
IDH3A-219ENST00000560414 HBS1LQ9Y450 684 aaKnown RBP15.34■□□□□ 0.05
IDH3A-219ENST00000560414 CEP250Q9BV73 2442 aa15.34■□□□□ 0.05
IDH3A-219ENST00000560414 KCNJ18B7U540 433 aa15.33■□□□□ 0.04
IDH3A-219ENST00000560414 PES1O00541 588 aaKnown RBP15.33■□□□□ 0.04
IDH3A-219ENST00000560414 MED7O43513 233 aa15.33■□□□□ 0.04
IDH3A-219ENST00000560414 TSPAN3O60637 253 aa15.33■□□□□ 0.04
IDH3A-219ENST00000560414 FBXO21O94952 628 aa15.33■□□□□ 0.04
IDH3A-219ENST00000560414 FYNP06241 537 aa15.33■□□□□ 0.04
IDH3A-219ENST00000560414 PNMA6AP0CW24 399 aaPredicted RBP15.33■□□□□ 0.04
IDH3A-219ENST00000560414 RPL34P49207 117 aaKnown RBP15.33■□□□□ 0.04
IDH3A-219ENST00000560414 HARS2P49590 506 aaKnown RBP15.33■□□□□ 0.04
IDH3A-219ENST00000560414 KCNJ12Q14500 433 aa15.33■□□□□ 0.04
IDH3A-219ENST00000560414 CCDC6Q16204 474 aa15.33■□□□□ 0.04
IDH3A-219ENST00000560414 PLK5Q496M5 336 aa15.33■□□□□ 0.04
IDH3A-219ENST00000560414 DPY19L2P1Q6NXN4 242 aa15.33■□□□□ 0.04
IDH3A-219ENST00000560414 MSANTD2Q6P1R3 559 aa15.33■□□□□ 0.04
IDH3A-219ENST00000560414 CPXM2Q8N436 756 aa15.33■□□□□ 0.04
IDH3A-219ENST00000560414 GPR161Q8N6U8 529 aaKnown RBP15.33■□□□□ 0.04
IDH3A-219ENST00000560414 DDI1Q8WTU0 396 aa15.33■□□□□ 0.04
IDH3A-219ENST00000560414 FAM81BQ96LP2 452 aa15.33■□□□□ 0.04
IDH3A-219ENST00000560414 ARRDC1-AS1Q9H2J1 176 aa15.33■□□□□ 0.04
IDH3A-219ENST00000560414 POLMQ9NP87 494 aaPredicted RBP15.33■□□□□ 0.04
IDH3A-219ENST00000560414 SEMA4GQ9NTN9 838 aa15.33■□□□□ 0.04
IDH3A-219ENST00000560414 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.33■□□□□ 0.04
IDH3A-219ENST00000560414 SPAG17Q6Q759 2223 aa15.32■□□□□ 0.04
IDH3A-219ENST00000560414 TCRBV21S2A2A0A5A6 115 aa15.32■□□□□ 0.04
IDH3A-219ENST00000560414 E5RJQ4 531 aa15.32■□□□□ 0.04
IDH3A-219ENST00000560414 FOXN3O00409 490 aaPredicted RBP15.32■□□□□ 0.04
IDH3A-219ENST00000560414 PAPSS1O43252 624 aaPredicted RBP15.32■□□□□ 0.04
IDH3A-219ENST00000560414 ALDH1A2O94788 518 aa15.32■□□□□ 0.04
IDH3A-219ENST00000560414 CYBBP04839 570 aa15.32■□□□□ 0.04
IDH3A-219ENST00000560414 NCAM1P13591 858 aa15.32■□□□□ 0.04
IDH3A-219ENST00000560414 NTSR1P30989 418 aa15.32■□□□□ 0.04
IDH3A-219ENST00000560414 GBP1P32455 592 aa15.32■□□□□ 0.04
IDH3A-219ENST00000560414 KCNMA1Q12791 1236 aa15.32■□□□□ 0.04
IDH3A-219ENST00000560414 GEN1Q17RS7 908 aa15.32■□□□□ 0.04
IDH3A-219ENST00000560414 RSPO4Q2I0M5 234 aaPredicted RBP15.32■□□□□ 0.04
IDH3A-219ENST00000560414 USP39Q53GS9 565 aaKnown RBP15.32■□□□□ 0.04
IDH3A-219ENST00000560414 FAM217AQ8IXS0 508 aa15.32■□□□□ 0.04
IDH3A-219ENST00000560414 CHPFQ8IZ52 775 aa15.32■□□□□ 0.04
IDH3A-219ENST00000560414 HMGB4Q8WW32 186 aa15.32■□□□□ 0.04
IDH3A-219ENST00000560414 RLN3Q8WXF3 142 aa15.32■□□□□ 0.04
IDH3A-219ENST00000560414 GOLGA1Q92805 767 aa15.32■□□□□ 0.04
IDH3A-219ENST00000560414 FAM149B1Q96BN6 582 aa15.32■□□□□ 0.04
IDH3A-219ENST00000560414 DUSP15Q9H1R2 295 aaPredicted RBP15.32■□□□□ 0.04
IDH3A-219ENST00000560414 BCCIPQ9P287 314 aaKnown RBP eCLIP15.32■□□□□ 0.04
IDH3A-219ENST00000560414 TJP2Q9UDY2 1190 aa15.32■□□□□ 0.04
IDH3A-219ENST00000560414 NAALADL1Q9UQQ1 740 aa15.32■□□□□ 0.04
IDH3A-219ENST00000560414 NFE2L3Q9Y4A8 694 aa15.32■□□□□ 0.04
IDH3A-219ENST00000560414 ABCA7Q8IZY2 2146 aa15.32■□□□□ 0.04
IDH3A-219ENST00000560414 GOLGA6L7A0A1B0GV03 622 aa15.31■□□□□ 0.04
IDH3A-219ENST00000560414 WASH3PC4AMC7 463 aa15.31■□□□□ 0.04
IDH3A-219ENST00000560414 HOXB2P14652 356 aa15.31■□□□□ 0.04
IDH3A-219ENST00000560414 BCKDHBP21953 392 aa15.31■□□□□ 0.04
IDH3A-219ENST00000560414 ACADSBP45954 432 aa15.31■□□□□ 0.04
IDH3A-219ENST00000560414 MEA1Q16626 185 aa15.31■□□□□ 0.04
IDH3A-219ENST00000560414 TMEM259Q4ZIN3 620 aa15.31■□□□□ 0.04
IDH3A-219ENST00000560414 TCP11X2Q5H9J9 407 aa15.31■□□□□ 0.04
IDH3A-219ENST00000560414 CT47A1Q5JQC4 288 aaPredicted RBP15.31■□□□□ 0.04
IDH3A-219ENST00000560414 SYPL2Q5VXT5 272 aa15.31■□□□□ 0.04
IDH3A-219ENST00000560414 RBM43Q6ZSC3 357 aaKnown RBP15.31■□□□□ 0.04
IDH3A-219ENST00000560414 TRMT11Q7Z4G4 463 aaKnown RBP15.31■□□□□ 0.04
IDH3A-219ENST00000560414 TMEM110Q86TL2 294 aa15.31■□□□□ 0.04
IDH3A-219ENST00000560414 PASD1Q8IV76 773 aa15.31■□□□□ 0.04
IDH3A-219ENST00000560414 PGBD3Q8N328 593 aa15.31■□□□□ 0.04
IDH3A-219ENST00000560414 WDTC1Q8N5D0 677 aa15.31■□□□□ 0.04
IDH3A-219ENST00000560414 FRMD1Q8N878 549 aa15.31■□□□□ 0.04
IDH3A-219ENST00000560414 ADAM32Q8TC27 787 aa15.31■□□□□ 0.04
IDH3A-219ENST00000560414 DQX1Q8TE96 717 aaKnown RBP15.31■□□□□ 0.04
IDH3A-219ENST00000560414 STK32AQ8WU08 396 aa15.31■□□□□ 0.04
IDH3A-219ENST00000560414 ZC3H10Q96K80 434 aaKnown RBP15.31■□□□□ 0.04
IDH3A-219ENST00000560414 CACNA2D2Q9NY47 1150 aa15.31■□□□□ 0.04
IDH3A-219ENST00000560414 TAB2Q9NYJ8 693 aa15.31■□□□□ 0.04
IDH3A-219ENST00000560414 RAD54BQ9Y620 910 aa15.31■□□□□ 0.04
IDH3A-219ENST00000560414 DNAH14Q0VDD8 3507 aa15.3■□□□□ 0.04
IDH3A-219ENST00000560414 A0A1W2PQF6 199 aa15.3■□□□□ 0.04
IDH3A-219ENST00000560414 GOLGA6L22H0YM25 854 aa15.3■□□□□ 0.04
IDH3A-219ENST00000560414 LRP3O75074 770 aa15.3■□□□□ 0.04
IDH3A-219ENST00000560414 EPN2O95208 641 aa15.3■□□□□ 0.04
IDH3A-219ENST00000560414 IGLV3-27P01718 113 aa15.3■□□□□ 0.04
IDH3A-219ENST00000560414 HOXD9P28356 352 aaPredicted RBP15.3■□□□□ 0.04
IDH3A-219ENST00000560414 SGSHP51688 502 aa15.3■□□□□ 0.04
IDH3A-219ENST00000560414 TBX4P57082 545 aa15.3■□□□□ 0.04
IDH3A-219ENST00000560414 LMNB2Q03252 620 aa15.3■□□□□ 0.04
IDH3A-219ENST00000560414 PTK2Q05397 1052 aa15.3■□□□□ 0.04
IDH3A-219ENST00000560414 PDCLQ13371 301 aa15.3■□□□□ 0.04
IDH3A-219ENST00000560414 TAF5Q15542 800 aa15.3■□□□□ 0.04
IDH3A-219ENST00000560414 CSRP2Q16527 193 aa15.3■□□□□ 0.04
IDH3A-219ENST00000560414 MPPE1Q53F39 396 aa15.3■□□□□ 0.04
IDH3A-219ENST00000560414 ADGRF1Q5T601 910 aa15.3■□□□□ 0.04
IDH3A-219ENST00000560414 RALGAPA1Q6GYQ0 2036 aa15.3■□□□□ 0.04
IDH3A-219ENST00000560414 SDE2Q6IQ49 451 aa15.3■□□□□ 0.04
IDH3A-219ENST00000560414 KIAA1211LQ6NV74 962 aa15.3■□□□□ 0.04
IDH3A-219ENST00000560414 RFWD3Q6PCD5 774 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms