RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 LGALS16A8MUM7 142 aa12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 WASH3PC4AMC7 463 aa12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 SART1O43290 800 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 GRAP2O75791 330 aa12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 CYBBP04839 570 aa12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 POLR2FP61218 127 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 RING1Q06587 406 aa12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 SPEM2Q0P670 501 aa12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 SYCP1Q15431 976 aa12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 HSF5Q4G112 596 aaPredicted RBP12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 PREPLQ4J6C6 727 aaPredicted RBP12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 EOGTQ5NDL2 527 aa12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 TMEM215Q68D42 235 aa12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 LAIR1Q6GTX8 287 aa12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 KIAA1211LQ6NV74 962 aa12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 BEND5Q7L4P6 421 aa12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 FRMD1Q8N878 549 aa12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 SLC20A1Q8WUM9 679 aa12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 SORCS1Q8WY21 1168 aa12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 SLC39A13Q96H72 371 aa12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 STK33Q9BYT3 514 aa12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 POPDC2Q9HBU9 364 aa12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 NLRC4Q9NPP4 1024 aa12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 CACNA2D2Q9NY47 1150 aa12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 TLR6Q9Y2C9 796 aa12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 SLC27A6Q9Y2P4 619 aa12.12□□□□□ -0.47
RABGGTA-216ENST00000560243 TCRBV21S2A2A0A5A6 115 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 CAPN9O14815 690 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 ACSL4O60488 711 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 GFPT2O94808 682 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 LATS1O95835 1130 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 TRUB2O95900 331 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 MOCS2O96007 188 aaPredicted RBP12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 IGLV3-25P01717 112 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 MMEP08473 750 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 HOXB2P14652 356 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 BCKDHBP21953 392 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 NTSR1P30989 418 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 BPIFB4P59827 614 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 MPPE1Q53F39 396 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 C2CD6Q53TS8 623 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 DCAF6Q58WW2 860 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 ZC3H12AQ5D1E8 599 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 FKBP15Q5T1M5 1219 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 NUGGCQ68CJ6 796 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 SMYD5Q6GMV2 418 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 OR6B2Q6IFH4 312 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 OLFML1Q6UWY5 402 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 NUDT18Q6ZVK8 323 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 CACNA2D4Q7Z3S7 1137 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 UNC45BQ8IWX7 931 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 DHX40Q8IX18 779 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 CHPFQ8IZ52 775 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 DEFB106AQ8N104 65 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 WFDC5Q8TCV5 224 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 KCNV2Q8TDN2 545 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 EPS8L1Q8TE68 723 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 HMGB4Q8WW32 186 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 RLN3Q8WXF3 142 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 TMA16Q96EY4 203 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 PRICKLE1Q96MT3 831 aaPredicted RBP12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 SERPINB11Q96P15 392 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 SLC2A13Q96QE2 648 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 NUCKS1Q9H1E3 243 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 CD248Q9HCU0 757 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 NOCTQ9UK39 431 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 GMEB2Q9UKD1 530 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 RAD54BQ9Y620 910 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 DNAH14Q0VDD8 3507 aa12.11□□□□□ -0.47
RABGGTA-216ENST00000560243 THADAQ6YHU6 1953 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 SPTBN2O15020 2390 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 LRRC10BA6NIK2 292 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 IRAK2O43187 625 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 RETP07949 1114 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 TPM2P07951 284 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 CHRNB2P17787 502 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 GABRG2P18507 467 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 CDK11BP21127 795 aaKnown RBP12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 HLA-FP30511 346 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 CDH5P33151 784 aaPredicted RBP12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 SLC11A2P49281 568 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 JAM2P57087 298 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 RPS24P62847 133 aaKnown RBP12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 UBXN1Q04323 297 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 NNTQ13423 1086 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 EIF4EBP2Q13542 120 aaPredicted RBP12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 CCDC6Q16204 474 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 PLK5Q496M5 336 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 PIK3R6Q5UE93 754 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 ANKS1BQ7Z6G8 1248 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 TMEM35BQ8NCS4 154 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 OLIG1Q8TAK6 271 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 AZIN2Q96A70 460 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 NOX5Q96PH1 765 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 GABRG3Q99928 467 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 FUCA2Q9BTY2 467 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 SLC2A11Q9BYW1 496 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 ADAM33Q9BZ11 813 aa12.1□□□□□ -0.47
RABGGTA-216ENST00000560243 DUSP15Q9H1R2 295 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms