RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 TAF5Q15542 800 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 EOGTQ5NDL2 527 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 PIK3R6Q5UE93 754 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 HEATR6Q6AI08 1181 aaKnown RBP13.75□□□□□ -0.21
SMAD3-213ENST00000560175 OLFML1Q6UWY5 402 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 SLC26A9Q7LBE3 791 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 TRMT11Q7Z4G4 463 aaKnown RBP13.75□□□□□ -0.21
SMAD3-213ENST00000560175 NOP9Q86U38 636 aaKnown RBP13.75□□□□□ -0.21
SMAD3-213ENST00000560175 CCDC33Q8N5R6 958 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 TMEM35BQ8NCS4 154 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 C1orf131Q8NDD1 294 aaKnown RBP13.75□□□□□ -0.21
SMAD3-213ENST00000560175 ANKRD20A12PQ8NF67 263 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 OLIG1Q8TAK6 271 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 NT5C3BQ969T7 300 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 TMA16Q96EY4 203 aaKnown RBP13.75□□□□□ -0.21
SMAD3-213ENST00000560175 NOX5Q96PH1 765 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 HHIPQ96QV1 700 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 GABRG3Q99928 467 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 NOCTQ9UK39 431 aaKnown RBP13.75□□□□□ -0.21
SMAD3-213ENST00000560175 SDK1Q7Z5N4 2213 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 SPTBN4Q9H254 2564 aa13.75□□□□□ -0.21
SMAD3-213ENST00000560175 DCHS1Q96JQ0 3298 aa13.74□□□□□ -0.21
SMAD3-213ENST00000560175 A0A1W2PQF6 199 aa13.74□□□□□ -0.21
SMAD3-213ENST00000560175 SMTNL1A8MU46 457 aa13.74□□□□□ -0.21
SMAD3-213ENST00000560175 KCNU1A8MYU2 1149 aa13.74□□□□□ -0.21
SMAD3-213ENST00000560175 NPC1O15118 1278 aa13.74□□□□□ -0.21
SMAD3-213ENST00000560175 TIMM44O43615 452 aa13.74□□□□□ -0.21
SMAD3-213ENST00000560175 HSF2BPO75031 334 aa13.74□□□□□ -0.21
SMAD3-213ENST00000560175 KLF8O95600 359 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-213ENST00000560175 LSM8O95777 96 aaKnown RBP13.74□□□□□ -0.21
SMAD3-213ENST00000560175 TRUB2O95900 331 aaKnown RBP13.74□□□□□ -0.21
SMAD3-213ENST00000560175 CDK11BP21127 795 aaKnown RBP13.74□□□□□ -0.21
SMAD3-213ENST00000560175 NTSR1P30989 418 aa13.74□□□□□ -0.21
SMAD3-213ENST00000560175 SOX5P35711 763 aa13.74□□□□□ -0.21
SMAD3-213ENST00000560175 PXNP49023 591 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-213ENST00000560175 SLC11A2P49281 568 aa13.74□□□□□ -0.21
SMAD3-213ENST00000560175 SLC6A3Q01959 620 aa13.74□□□□□ -0.21
SMAD3-213ENST00000560175 SRSF5Q13243 272 aaKnown RBP13.74□□□□□ -0.21
SMAD3-213ENST00000560175 SIM2Q14190 667 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-213ENST00000560175 SYCP1Q15431 976 aa13.74□□□□□ -0.21
SMAD3-213ENST00000560175 GEN1Q17RS7 908 aa13.74□□□□□ -0.21
SMAD3-213ENST00000560175 C10orf76Q5T2E6 689 aa13.74□□□□□ -0.21
SMAD3-213ENST00000560175 LAIR1Q6GTX8 287 aa13.74□□□□□ -0.21
SMAD3-213ENST00000560175 NADSYN1Q6IA69 706 aa13.74□□□□□ -0.21
SMAD3-213ENST00000560175 ARCQ7LC44 396 aa13.74□□□□□ -0.21
SMAD3-213ENST00000560175 TAC4Q86UU9 113 aa13.74□□□□□ -0.21
SMAD3-213ENST00000560175 PASD1Q8IV76 773 aa13.74□□□□□ -0.21
SMAD3-213ENST00000560175 DEFB106AQ8N104 65 aa13.74□□□□□ -0.21
SMAD3-213ENST00000560175 AOPEPQ8N6M6 819 aa13.74□□□□□ -0.21
SMAD3-213ENST00000560175 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.74□□□□□ -0.21
SMAD3-213ENST00000560175 ZNF513Q8N8E2 541 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-213ENST00000560175 FAM149B1Q96BN6 582 aa13.74□□□□□ -0.21
SMAD3-213ENST00000560175 LMLNQ96KR4 655 aa13.74□□□□□ -0.21
SMAD3-213ENST00000560175 RTN4Q9NQC3 1192 aaKnown RBP13.74□□□□□ -0.21
SMAD3-213ENST00000560175 FAM207AQ9NSI2 230 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-213ENST00000560175 DMXL1Q9Y485 3027 aa13.74□□□□□ -0.21
SMAD3-213ENST00000560175 CKAP5Q14008 2032 aa13.73□□□□□ -0.21
SMAD3-213ENST00000560175 CAPN9O14815 690 aa13.73□□□□□ -0.21
SMAD3-213ENST00000560175 RPP40O75818 363 aaKnown RBP13.73□□□□□ -0.21
SMAD3-213ENST00000560175 CYP1A1P04798 512 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-213ENST00000560175 RETP07949 1114 aa13.73□□□□□ -0.21
SMAD3-213ENST00000560175 CHRNB2P17787 502 aa13.73□□□□□ -0.21
SMAD3-213ENST00000560175 SLC6A4P31645 630 aa13.73□□□□□ -0.21
SMAD3-213ENST00000560175 NOS2P35228 1153 aa13.73□□□□□ -0.21
SMAD3-213ENST00000560175 ZNF165P49910 485 aa13.73□□□□□ -0.21
SMAD3-213ENST00000560175 NOMO3P69849 1222 aa13.73□□□□□ -0.21
SMAD3-213ENST00000560175 PITX1P78337 314 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-213ENST00000560175 UBXN1Q04323 297 aa13.73□□□□□ -0.21
SMAD3-213ENST00000560175 EIF4HQ15056 248 aaKnown RBP13.73□□□□□ -0.21
SMAD3-213ENST00000560175 EGFLAMQ63HQ2 1017 aa13.73□□□□□ -0.21
SMAD3-213ENST00000560175 TMEM215Q68D42 235 aa13.73□□□□□ -0.21
SMAD3-213ENST00000560175 FAM183BPQ6ZVS7 135 aa13.73□□□□□ -0.21
SMAD3-213ENST00000560175 BNIPLQ7Z465 357 aa13.73□□□□□ -0.21
SMAD3-213ENST00000560175 TSTD1Q8NFU3 115 aa13.73□□□□□ -0.21
SMAD3-213ENST00000560175 DDI1Q8WTU0 396 aa13.73□□□□□ -0.21
SMAD3-213ENST00000560175 BHMTQ93088 406 aa13.73□□□□□ -0.21
SMAD3-213ENST00000560175 C18orf8Q96DM3 657 aa13.73□□□□□ -0.21
SMAD3-213ENST00000560175 PGAP3Q96FM1 320 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-213ENST00000560175 LOXL4Q96JB6 756 aa13.73□□□□□ -0.21
SMAD3-213ENST00000560175 ACOX2Q99424 681 aa13.73□□□□□ -0.21
SMAD3-213ENST00000560175 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.73□□□□□ -0.21
SMAD3-213ENST00000560175 ELOVL2Q9NXB9 296 aa13.73□□□□□ -0.21
SMAD3-213ENST00000560175 THAP10Q9P2Z0 257 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-213ENST00000560175 CEP83Q9Y592 693 aa13.73□□□□□ -0.21
SMAD3-213ENST00000560175 GOLGA6L7A0A1B0GV03 622 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 LRP3O75074 770 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 MMEP08473 750 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 PTMSP20962 102 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 HLA-FP30511 346 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 STAT1P42224 750 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 MATKP42679 507 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 SGSHP51688 502 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 FMO1Q01740 532 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 CDR2Q01850 454 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 E2F5Q15329 346 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 DCAF6Q58WW2 860 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 MS4A13Q5J8X5 152 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 OR6B2Q6IFH4 312 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 CACNA2D4Q7Z3S7 1137 aa13.72□□□□□ -0.21
SMAD3-213ENST00000560175 XYLT1Q86Y38 959 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms